cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 2660 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2660 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2660 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 2660 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 2660
in 'msaprobs'
muscle

The residue for every species at site 2660 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---L---DQL Y KI-------- Site 1791
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---D---DHL A LM-------- Site 1791
Danio.rerio.CDK1 ---I---DQL F RI-------- Site 1791
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---V---HQL R LL-------- Site 1791
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---D---DQL K RI-------- Site 1791
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---E---DQL R II-------- Site 1791
Candida.guilliermondii.IME2 ---I---DQI W RI-------- Site 1791
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---GTKKQKY D KI-------- Site 1788
Chlamydomonas.reinhardtii.LF4 ---L---DQI T KI-------- Site 1791
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---V---EQL V EI-------- Site 1791
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---NTKQQKY E KI-------- Site 1788
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---PNNKQKY E K--------- Site 1788
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho PYHH---DQL D RI-------- Site 1791
Schizosaccharomyces.octosporus.b.IME2 ---T---DQL N RI-------- Site 1791
Candida.albicans.MAPK3..Extracellular.signal.regul ---H---NQL W LI-------- Site 1791
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---Q---DQL V KI-------- Site 1791
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---ATKKQKY Q KI-------- Site 1788
Suberites.domuncula.JNK..Stress.activated.protein. ---I---DQW N KV-------- Site 1791
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---R---EHL V MM-------- Site 1791
Aedes.aegypti.CDK1 ---I---DQL F RM-------- Site 1791
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---R---EHL A MM-------- Site 1791
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---R---EHL A MM-------- Site 1791
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---V---EQL A CI-------- Site 1791
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---Y---DQI R YI-------- Site 1791
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---V---DQL Y LI-------- Site 1791
Species Residue at Site 2660
in 'msaprobs'
muscle

The residue for every species at site 2660 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---I---EQL L KI-------- Site 1791
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---Y---DQL V RI-------- Site 1791
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---L---DQL N HI-------- Site 1791
Strongylocentrotus.purpuratus.CDK1 ---I---DQL F RI-------- Site 1791
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---ATKKQKY D KI-------- Site 1788
Drosophila.melanogaster.CDK1 ---I---DQL F RM-------- Site 1791
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---KTKEEKY E QI-------- Site 1788
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---YTKRDKY E KI-------- Site 1791
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---E---DHL A LM-------- Site 1791
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---K---EEL H LI-------- Site 1791
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---Y---DQL D KI-------- Site 1791
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---I---DQW N KV-------- Site 1791
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---I---DQL Y HI-------- Site 1791
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---I---DQW N KV-------- Site 1791
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---L---DQL T QI-------- Site 1791
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---I---QQL D LI-------- Site 1791
Bombus.terrestris.CDK1 ---I---DQL F RI-------- Site 1791
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---E---DHI A LI-------- Site 1791
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---I---DQL Y HI-------- Site 1791
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---I---DQW N KV-------- Site 1791
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---L---AQL E LI-------- Site 1791
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---L---DQI S KI-------- Site 1791
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---S---GQL R EI-------- Site 1791
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---A---GQL H EI-------- Site 1791
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---NTKQQKY E KI-------- Site 1788
Species Residue at Site 2660
in 'msaprobs'
muscle

The residue for every species at site 2660 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---GTKKQKY E RISEKKVSTS Site 1788
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---F---DQI R YI-------- Site 1791
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---Q---DQL V KI-------- Site 1791
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---I---QQL D LI-------- Site 1791
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---V---DQL Y LI-------- Site 1791
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---Y---DQI R YI-------- Site 1791
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---I---DQI N KV-------- Site 1791
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---I---DQL F TI-------- Site 1791
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---R---EHL A MM-------- Site 1791
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---I---DQI N KV-------- Site 1791
Naegleria.gruberi.LF4 ---L---DQI H LI-------- Site 1791
Saccharomyces.bayanus.IME2 ---I---DQI W KI-------- Site 1791
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---Y---DQL V RI-------- Site 1791
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---L---DQL M EI-------- Site 1791
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---I---DQL R KI-------- Site 1791
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---Q---DQL T KI-------- Site 1791
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---V---DQM S RI-------- Site 1791
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---G---DQL A CM-------- Site 1791
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---I---DQL F TI-------- Site 1791
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---F---HQL E LI-------- Site 1791
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---T---NQI S KI-------- Site 1791
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---V---EQL A CI-------- Site 1791
Aspergillus.nidulans.IME2 ---V---DQV W RV-------- Site 1791
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---L---TAL A QI-------- Site 1791
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---I---EQL Q MI-------- Site 1791
Species Residue at Site 2660
in 'msaprobs'
muscle

The residue for every species at site 2660 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---V---DEI F KI-------- Site 1791
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---I---DQL F RI-------- Site 1791
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---I---DQW N KV-------- Site 1791
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---V---DQL V EI-------- Site 1791
Penicillium.marneffei.IME2 ---V---DQV W RI-------- Site 1791
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---I---NQL Q QI-------- Site 1791
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---L---EQM Q LI-------- Site 1791
Drosophila.melanogaster.MAK ---V---DQL F KI-------- Site 1791
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---N---QML R YM-------- Site 1792
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---N---HML K LA-------- Site 1791
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---L---AQL E LI-------- Site 1791
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep LFQD---DQV E KI-------- Site 1791
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---I---HQI D LI-------- Site 1791
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---I---DQW N KV-------- Site 1791
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---I---DQW N KV-------- Site 1791
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---K---EHL A MM-------- Site 1791
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---L---TAL A QI-------- Site 1791
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---NTKQQKY E KI-------- Site 1788
Candida.parapsilosis.IME2 ---V---DML C KI-------- Site 1791
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p PFQS---TQM L RI-------- Site 1791
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---V---DQL V EI-------- Site 1791
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---I---DQW N KV-------- Site 1791
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---Y---DQL V RI-------- Site 1791
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---K---EHL A MM-------- Site 1791
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---L---EQM Q LI-------- Site 1791
Species Residue at Site 2660
in 'msaprobs'
muscle

The residue for every species at site 2660 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---E---EQL H FI-------- Site 1791
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---Y---DQL V RI-------- Site 1791
Yarrowia.lipolytica.SSN3..Serine.threonine.protein PFQR---NQM Q KI-------- Site 1791
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---L---DQL T QI-------- Site 1791
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---V---DQM N RI-------- Site 1791
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---Y---DQL V RI-------- Site 1791
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---V---DQL V EI-------- Site 1791
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---I---DQL V EI-------- Site 1791
Candida.orthopsilosis.IME2 ---M---DML C KV-------- Site 1791
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---L---DQL T KI-------- Site 1791
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---I---DQW T RI-------- Site 1791
Debaryomyces.hansenii.IME2 ---V---DQI W RI-------- Site 1791
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---V---DQL V EI-------- Site 1791
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin PFQG---NQL Q RI-------- Site 1791
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---I---SQL F KI-------- Site 1791
Caenorhabditis.briggsae.CDK1 ---I---DEL F RI-------- Site 1791
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---Y---DQL V RI-------- Site 1791
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---I---EQL C CV-------- Site 1791
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---G---DQL A CM-------- Site 1791
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---V---DQL G KI-------- Site 1791
Monosiga.brevicollis.CDK1 ---I---DQL F RI-------- Site 1791
Saccharomyces.cerevisiae.SKY1 ---D---DHI A QI-------- Site 1791
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---H---HQL S LI-------- Site 1791
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---I---DQL Y QI-------- Site 1791
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---V---DQL V EV-------- Site 1791
Species Residue at Site 2660
in 'msaprobs'
muscle

The residue for every species at site 2660 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---ISKKDKY D KI-------- Site 1788
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---L---HQL E LI-------- Site 1791
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---I---DQL H HI-------- Site 1791
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---V---DQI M RI-------- Site 1791
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---I---DQL F TI-------- Site 1791
Ajellomyces.capsulatus.CDK1 ---I---DEI F KI-------- Site 1791
Dictystelium.discoideum.MAPK3..Extracellular.signa ---I---HQI T LI-------- Site 1791
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---V---DQL G KI-------- Site 1791
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---I---HQV D LI-------- Site 1791
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---I---DQW N KV-------- Site 1791
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---L---DQL T QI-------- Site 1791
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---K---NQL D RI-------- Site 1791
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---I---QQL D LI-------- Site 1791
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---I---DQW N KV-------- Site 1791
Saccharomyces.cerevisiae.CDK1 ---I---DQI F KI-------- Site 1791
Lodderomyces.elongisporus.IME2 ---F---DQI W KI-------- Site 1791
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---I---NQL Q QI-------- Site 1791
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---R---EHL A MM-------- Site 1791
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---I---DQL F TI-------- Site 1791
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---I---DQL V EI-------- Site 1791
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---V---NQI E KI-------- Site 1791
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---K---EHL A MM-------- Site 1791
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---Y---DQI R YI-------- Site 1791
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---V---DQL Y LI-------- Site 1791
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---V---DQL V EI-------- Site 1791
Species Residue at Site 2660
in 'msaprobs'
muscle

The residue for every species at site 2660 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---I---DEL F RI-------- Site 1791
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---A---DQL G KI-------- Site 1791
Cryptococcus.neoformans.SSN3..Serine.threonine.pro PFQR---DQM G KI-------- Site 1791
Salmo.salar.CDK1 ---I---DQL F RI-------- Site 1791
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---L---DQL T RI-------- Site 1791
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---I---EQL C YV-------- Site 1791
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---I---NQI S KL-------- Site 1791
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---V---DQL V EI-------- Site 1791
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---A---MHL R KS-------- Site 1791
Aspergillus.fumigatus.IME2 ---V---DQV W RI-------- Site 1791
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan PYHH---DQL D RI-------- Site 1791
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---K---EHL A MM-------- Site 1791
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---V---DQL T QI-------- Site 1791
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---I---EQL Q MI-------- Site 1791
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---Y---DQI R YI-------- Site 1791
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---L---DQL N HI-------- Site 1791
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---E---DEL H LI-------- Site 1791
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---I---HQI D LI-------- Site 1791
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---V---DQL Y LI-------- Site 1791
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---I---DQW N KI-------- Site 1791
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---M---DQL M LI-------- Site 1791
Candida.glabrata.IME2 ---I---DQI W KI-------- Site 1791
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---V---DEI F KI-------- Site 1791
Schizosaccharomyces.pombe.IME2 ---F---DQL Y KM-------- Site 1791
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---H---NQL W LI-------- Site 1791
Species Residue at Site 2660
in 'msaprobs'
muscle

The residue for every species at site 2660 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---L---DQL M KI-------- Site 1791
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---Y---DQV R YI-------- Site 1791
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---ATKKQKY E KI-------- Site 1788
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---K---EEL H LI-------- Site 1791
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---V---DQL Y LI-------- Site 1791
Branchiostoma.floridae.CDK1 ---I---DQL F RV-------- Site 1791
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---R---EHL A MM-------- Site 1791
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---I---DQL V EI-------- Site 1791
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---V---DQL Y QV-------- Site 1791
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---V---DQL V EI-------- Site 1791
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---I---DTI F KI-------- Site 1791
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---R---EHL V MM-------- Site 1791
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---V---DQM N KI-------- Site 1791
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---I---DQL F RI-------- Site 1791
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---V---HQL Q LI-------- Site 1791
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---I---DQL K LI-------- Site 1791
Lachancea.thermotolerans.SKY1 ---D---DHI A QI-------- Site 1791
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---L---EQM Q LI-------- Site 1791
Dictyostelium.discoideum.CDK1 ---I---DQI F RI-------- Site 1791
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---L---DQL K EI-------- Site 1791
Xenopus.tropicalis.IME2 ---I---DQL F RI-------- Site 1791
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---Y---DQI R YI-------- Site 1791
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---Y---DQL V RI-------- Site 1791
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---I---DQL F RI-------- Site 1791
Species Residue at Site 2660
in 'msaprobs'
muscle

The residue for every species at site 2660 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---I---DQL F RI-------- Site 1791
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. --IL---EQL E KI-------- Site 1791
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---M---NQL D LI-------- Site 1791
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---V---DQM N KI-------- Site 1791
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---V---DQL V EI-------- Site 1791
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---V---DQI V EI-------- Site 1791
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---L---ELI D KI-------- Site 1791
Encephalitozoon.cuniculi.CDK1 ---I---DQL F RI-------- Site 1791
Saccharomyces.kluyveri.IME2 ---M---DQI W KI-------- Site 1791
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---K---EHL A MM-------- Site 1791
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---L---DQL N HI-------- Site 1791
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. --IL---EQL E KI-------- Site 1791
Cryptococcus.neoformans.IME2 ---I---DQV Y RI-------- Site 1791
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---Y---DQV R YI-------- Site 1791
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---E---DHI A LI-------- Site 1791
Candida.lusitaniae.IME2 ---T---DQL W QV-------- Site 1791
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---Y---DQI R YI-------- Site 1791
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A PYHH---DQL D RI-------- Site 1791
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---I---EQL C CV-------- Site 1791
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---V---DQL Y LI-------- Site 1791
Gallus.gallus.CDK2 ---I---DQL F RI-------- Site 1791
Emericella.nidulans.CDK1 ---I---DEI F KI-------- Site 1791
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---L---DQI S KI-------- Site 1791
Homo.sapiens.CDK1 ---I---DQL F RI-------- Site 1791
Candida.albicans.CDK1 ---I---DEI F RI-------- Site 1791
Species Residue at Site 2660
in 'msaprobs'
muscle

The residue for every species at site 2660 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---Y---DQL V RI-------- Site 1791
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---V---HQL Q LI-------- Site 1791
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---I---DTI F KI-------- Site 1791
Saccharomyces.castelli.IME2 ---L---DQI W RI-------- Site 1791
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---K---EHL A MM-------- Site 1791
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---L---DQL T RI-------- Site 1791
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---I--QDQL E RI-------- Site 1791
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---V---DQL V EI-------- Site 1791
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---A---DSL L EL-------- Site 1791
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---L---DQL T GI-------- Site 1791
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---Q---HQL A LI-------- Site 1791
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---Y---DQI R YI-------- Site 1791
Acyrthosiphon.pisum.CDK1 ---I---DQL F RI-------- Site 1791
Candida.tropicalis.CDK1 ---F---DQI W KI-------- Site 1791
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin PYHH---DQL D RI-------- Site 1791
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---V---DQL V EI-------- Site 1791
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---Y---DQL V RI-------- Site 1791
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---E---EQL H FI-------- Site 1791
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---Q---DQL V KI-------- Site 1791
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---E---DEL H LI-------- Site 1791
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---L---DQL T QI-------- Site 1791
Candida.albicans.SSN3..Serine.threonine.protein.ki PFQK---NQL Q KI-------- Site 1791
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---L---DQI Q KI-------- Site 1791
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---V---DQL V EI-------- Site 1791
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---M---DQL T QI-------- Site 1791
Species Residue at Site 2660
in 'msaprobs'
muscle

The residue for every species at site 2660 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---L---DQL D KI-------- Site 1791
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---Y---DQL V RI-------- Site 1791
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---Y---DQI R YI-------- Site 1791
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---I---DQI N KI-------- Site 1791
Candida.dubliniensis.IME2 ---L---DQI W KI-------- Site 1791
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---I---DQW N KV-------- Site 1791
Aspergillus.niger.IME2 ---V---DQV W RV-------- Site 1791
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---I---DQL K LI-------- Site 1791
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---L---DLL H KI-------- Site 1791
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---I--QDQL E RI-------- Site 1791
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---Y---DQL V RI-------- Site 1791
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---V---DQM M KI-------- Site 1791
Schizosaccharomyces.japonicus.IME2 ---L---DQL Y KM-------- Site 1791
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---I---DQW T RI-------- Site 1791
Gallus.gallus.CDK1 ---I---DQL F RI-------- Site 1791
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---D---DQL K RI-------- Site 1791
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---I---DQL V EI-------- Site 1791
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---A---QQL H EI-------- Site 1791
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---V---DQL V EI-------- Site 1791
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---L---DQL K EI-------- Site 1791
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---P---DQL V KI-------- Site 1791
Kluyveromyces.waltii.IME2 ---M---DQI W KI-------- Site 1791
Debaryomyces.hansenii.SKY1 ---D---DHI A QI-------- Site 1791
Saccharomyces.cerevisiae.IME2 ---I---DQI W KI-------- Site 1791
Schizosaccharomyces.japonicus.b.IME2 ---L---DQL N RM-------- Site 1791
Species Residue at Site 2660
in 'msaprobs'
muscle

The residue for every species at site 2660 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---V---DQL G KI-------- Site 1791
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---Y---DQL V RI-------- Site 1791
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---L---EQM Q LI-------- Site 1791
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---V---DQL G KI-------- Site 1791
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---I---DQL V EI-------- Site 1791
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---L---NQL T EI-------- Site 1791
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---L---DLL H KI-------- Site 1791
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---I---DQW N KV-------- Site 1791
Candida.albicans.IME2 ---L---DQI W KI-------- Site 1791
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---A---DQL C KI-------- Site 1791
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---I---DQM D KI-------- Site 1791
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---I---DQL K LI-------- Site 1791
Kluyveromyces.lactis.IME2 ---T---DQI W RI-------- Site 1791
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---V---HQL Q LI-------- Site 1791
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---I---DQW N KV-------- Site 1791
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---I---DQL K RI-------- Site 1791
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---NTKQQKY E KI-------- Site 1788
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---I---DQL K RI-------- Site 1791
Amphimedon.queenslandica.CDK1 ---I---DQL F RI-------- Site 1791
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---V---DQL Y LI-------- Site 1791
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---I---DQL F QI-------- Site 1791
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---I---DEL N RI-------- Site 1791
Neurospora.crassa.IME2 ---V---DQV W RV-------- Site 1791
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---L---DQL M KI-------- Site 1791
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---P---EQL A CI-------- Site 1791
Species Residue at Site 2660
in 'msaprobs'
muscle

The residue for every species at site 2660 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---A---DQL G KI-------- Site 1791
Hydra.magnipapillata.CDK1 ---I---DQL F KV-------- Site 1791
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---I---HQI D LI-------- Site 1791
Ashbya.gossypii.IME2 ---M---DQI W KI-------- Site 1791
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---I---NQV S KL-------- Site 1791
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---G---DQL A CM-------- Site 1791
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---I---DQL V EI-------- Site 1791
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---I---NQI E KI-------- Site 1791
Schizosaccharomyces.pombe.b.IME2 ---T---DQL N RV-------- Site 1791
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---L---DQL N HI-------- Site 1791
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---Y---DQI R YI-------- Site 1791
Schizosaccharomyces.pombe.CDK1 ---I---DEI F KI-------- Site 1791
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---R---EHL A MM-------- Site 1791
Saccoglossus.kowalevskii.CDK1 ---I---DQL F RI-------- Site 1791
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---ATKRQKY E RI-------- Site 1788
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---I---DQW N KV-------- Site 1791
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---I---DQL F RI-------- Site 1791
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---A---MQL R KA-------- Site 1791
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---I---DQL F RI-------- Site 1791
Yarrowia.lipolytica.IME2 ---L---DQF S LQ-------- Site 1791
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil PFQV---NQL Q RI-------- Site 1791
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---I---DQL F RI-------- Site 1791
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---I---DAF L EI-------- Site 1791
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---I---DQL V EI-------- Site 1791
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---I---DQL V EI-------- Site 1791
Species Residue at Site 2660
in 'msaprobs'
muscle

The residue for every species at site 2660 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---V---DQM M KI-------- Site 1791
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---I---QQL D LI-------- Site 1791
Scheffersomyces.stipitis.SKY1 ---D---DHI A QI-------- Site 1791
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---D---DQL K RI-------- Site 1791

Generated by PhyloBot at 16:46, October 23rd 2019
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