cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 2630 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2630 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2630 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 2630 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 2630
in 'msaprobs'
muscle

The residue for every species at site 2630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -T-L-QPIFP G MD------D- Site 1763
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -T-G-DHLFK P KSGKGFEKS- Site 1763
Danio.rerio.CDK1 -T-R-RALFP G DS------E- Site 1763
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -D-R-KPLFP G RD------H- Site 1763
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -NAG-RPLFP G ND------V- Site 1763
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -NSG-TPLFP G QD------I- Site 1763
Candida.guilliermondii.IME2 -K-V-TPLFP G AN------E- Site 1763
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -R-G-SLPWQ G LK------A- Site 1763
Chlamydomonas.reinhardtii.LF4 -S-L-FPLFP G TN------E- Site 1763
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -I-G-RPLFP G DS------S- Site 1763
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -R-G-VLPWQ G MK------A- Site 1763
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 -R-G-QLPWQ G LK------A- Site 1763
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -T-S-EPIFH C RQ------ED Site 1763
Schizosaccharomyces.octosporus.b.IME2 -T-L-KPLFP G RN------E- Site 1763
Candida.albicans.MAPK3..Extracellular.signal.regul -S-G-RPLFP G RD------Y- Site 1763
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -R-K-EPFFY G HD------N- Site 1763
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -R-G-SLPWQ G LK------A- Site 1763
Suberites.domuncula.JNK..Stress.activated.protein. -R-G-DILLP G KD------Y- Site 1763
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -R-G-FTLFQ T HE------N- Site 1763
Aedes.aegypti.CDK1 -T-R-KPLFQ G DS------E- Site 1763
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -L-G-FTVFP T HD------S- Site 1763
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -V-G-FTLFQ T HD------N- Site 1763
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -T-G-YPLFP G EN------E- Site 1763
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -L-G-WPLYP G AS------E- Site 1763
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -S-G-VPLWP G KS------D- Site 1763
Species Residue at Site 2630
in 'msaprobs'
muscle

The residue for every species at site 2630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -L-L-RPLFS G DS------E- Site 1763
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -R-R-EPFFH G QD------N- Site 1763
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -S-N-RPIFP G KH------Y- Site 1763
Strongylocentrotus.purpuratus.CDK1 -T-R-RALFP G DS------E- Site 1763
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -R-G-SLPWQ G LK------A- Site 1763
Drosophila.melanogaster.CDK1 -T-R-KPLFQ G DS------E- Site 1763
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -R-G-NLPWQ G LP------A- Site 1763
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -R-G-SLPWQ G LK------A- Site 1763
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -T-G-DMLFA P KDGNGYGED- Site 1763
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -T-G-RPLFP G ST------V- Site 1763
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -S-G-SATFP G MK-----DA- Site 1763
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -R-G-TVLFP G ID------H- Site 1763
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -M-G-EPLFP G DS------D- Site 1763
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -R-H-KILFP G RD------Y- Site 1763
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -T-G-KTLFK G KD------Y- Site 1763
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -G-R-RILFQ A QS------P- Site 1763
Bombus.terrestris.CDK1 -T-R-RALFP G DS------E- Site 1763
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -T-G-DYLFE P HSGEEYTRD- Site 1763
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -T-G-EPLFP G DS------D- Site 1763
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -K-G-GVLFP G TD------H- Site 1763
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -T-K-KPIFQ A NL------E- Site 1763
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -S-L-QPLFP G VN------E- Site 1763
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -L-G-EPIFC G EN------T- Site 1763
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -L-G-EPIFR G DN------S- Site 1763
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -R-G-VLPWQ G MK------A- Site 1763
Species Residue at Site 2630
in 'msaprobs'
muscle

The residue for every species at site 2630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -K-G-SLPWQ G LK------A- Site 1763
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -L-G-WPLYP G SS------E- Site 1763
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -R-K-EPFFY G HD------N- Site 1763
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -G-R-RILFQ A QS------P- Site 1763
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -S-G-VPLWP G KS------D- Site 1763
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -L-G-WPLYP G AL------E- Site 1763
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -T-Q-KPLFP G NS------E- Site 1763
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -D-G-QPLFP G ES------E- Site 1763
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -V-G-FTLFQ T HD------N- Site 1763
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -T-Q-KPLFP G KS------E- Site 1763
Naegleria.gruberi.LF4 -T-F-EPLFP G EN------E- Site 1763
Saccharomyces.bayanus.IME2 -V-F-RALFP G AN------E- Site 1763
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -R-K-EPFFH G QD------N- Site 1763
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -L-G-KPLFK G HD------H- Site 1763
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -L-R-TPYLP G TG------E- Site 1763
Dictyostelium.discoideum.DYRK1..Probable.serine.th -V-G-EPLFS G QN------E- Site 1763
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -T-G-EPLFS G SN------E- Site 1763
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -T-G-YPLLP G ED------E- Site 1763
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -D-G-QPLFP G ES------E- Site 1763
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -R-G-QPLFP G TS------T- Site 1763
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific -Y-G-KTPFQ N --------I- Site 1763
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -T-G-YPLFP G EN------E- Site 1763
Aspergillus.nidulans.IME2 -T-L-KPLFP G GN------E- Site 1763
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -S-GRYPFYK A SD------D- Site 1763
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -Q-R-KILFQ A AG------P- Site 1763
Species Residue at Site 2630
in 'msaprobs'
muscle

The residue for every species at site 2630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -T-F-RPLFP G TS------E- Site 1763
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -T-R-RALFP G DS------E- Site 1763
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -R-H-KILFP G RD------Y- Site 1763
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -L-G-QPLFP G ES------G- Site 1763
Penicillium.marneffei.IME2 -T-L-KPLFP G VN------E- Site 1763
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -T-G-RTLFP G TD------H- Site 1763
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -T-G-RMLFA G AH------E- Site 1763
Drosophila.melanogaster.MAK -T-F-RPLFP G SS------E- Site 1763
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -T-G-QILFP G RT------N- Site 1763
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -T-G-KILFP G KT------N- Site 1763
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -T-K-KPIFQ A NL------E- Site 1763
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -T-T-KPLFP G KE------KD Site 1763
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -A-H-KPLLP G TS------E- Site 1763
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -R-H-KILFP G RD------Y- Site 1763
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -K-G-CVIFQ G TD------H- Site 1763
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -L-G-FTVFP T HD------S- Site 1763
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -S-GRYPFYK A SD------D- Site 1763
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -R-G-VLPWQ G MK------A- Site 1763
Candida.parapsilosis.IME2 -N-F-APLFP G AN------E- Site 1763
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -A-L-SPLFK G DE------IK Site 1763
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -L-G-QPIFP G DS------G- Site 1763
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -K-G-CVIFQ G TD------H- Site 1763
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -R-K-EPFFH G HD------N- Site 1763
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -L-G-FTVFQ T HD------S- Site 1763
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -T-G-KMLFA G AH------E- Site 1763
Species Residue at Site 2630
in 'msaprobs'
muscle

The residue for every species at site 2630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -T-G-RPLFP G ST------V- Site 1763
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -R-K-EPFFH G HD------N- Site 1763
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -A-L-RPIFK G EE------AK Site 1763
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -T-G-KTLFK G KD------Y- Site 1763
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -T-G-EPLFS G SN------E- Site 1763
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -R-K-EPFFH G HD------N- Site 1763
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -L-G-QPLFP G DS------G- Site 1763
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -L-G-QPLFP G EN------G- Site 1763
Candida.orthopsilosis.IME2 -N-F-APLFP G AN------E- Site 1763
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -L-R-VPFLA G DS------D- Site 1763
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -R-G-RVLFP G AD------H- Site 1763
Debaryomyces.hansenii.IME2 -N-F-IPLFP G AS------E- Site 1763
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -L-G-QPLFP G ES------G- Site 1763
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -G-L-RPIFK G EE------AK Site 1763
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -S-T-KPLFP G EC------E- Site 1763
Caenorhabditis.briggsae.CDK1 -T-K-KPLFQ G DS------E- Site 1763
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -R-K-EPFFH G HD------N- Site 1763
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -N-G-SPLFP G EN------D- Site 1763
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -T-G-QPLFP G ED------E- Site 1763
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -R-R-KPLFR G NS------D- Site 1763
Monosiga.brevicollis.CDK1 -T-K-RPLFH G DS------E- Site 1763
Saccharomyces.cerevisiae.SKY1 -T-G-DFLFE P DEGHSYTKD- Site 1763
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -S-G-TPLFP G KD------Y- Site 1763
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -T-G-EPVFP G DS------D- Site 1763
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -L-G-QPIFP G DS------G- Site 1763
Species Residue at Site 2630
in 'msaprobs'
muscle

The residue for every species at site 2630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -R-G-SLPWQ G LK------A- Site 1763
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -R-G-RPLFP G TS------T- Site 1763
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -M-G-QPLFP G ES------D- Site 1763
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -I-G-RPLIT G NN------E- Site 1763
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -D-G-QPLFP G ES------E- Site 1763
Ajellomyces.capsulatus.CDK1 -T-R-KPLFP G DS------E- Site 1763
Dictystelium.discoideum.MAPK3..Extracellular.signa -G-R-KPLFQ G KD------Y- Site 1763
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -R-R-KPLFR G SS------D- Site 1763
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -A-H-KPLLP G TS------E- Site 1763
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -C-H-KILFP G RD------Y- Site 1763
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -T-G-KTLFK G KD------Y- Site 1763
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -N-R-RALFP G TS------E- Site 1763
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -G-R-RILFQ A QS------P- Site 1763
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -K-G-AVLFP G TD------H- Site 1763
Saccharomyces.cerevisiae.CDK1 -N-R-KPIFS G DS------E- Site 1763
Lodderomyces.elongisporus.IME2 -N-F-APLFP G SN------E- Site 1763
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -T-G-RTLFP G TD------H- Site 1763
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -V-G-FTLFQ T HD------N- Site 1763
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -D-G-QPLFP G ES------E- Site 1763
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -L-G-QPIFP G ES------K- Site 1763
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -R-Q-KPLFQ G TS------T- Site 1763
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -L-G-FTVFQ T HD------S- Site 1763
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -L-G-WPLYP G AS------E- Site 1763
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -S-G-VPLWP G KS------D- Site 1763
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -L-G-QPIFP G DS------G- Site 1763
Species Residue at Site 2630
in 'msaprobs'
muscle

The residue for every species at site 2630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -T-K-KPLFQ G DS------E- Site 1763
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -R-R-KPLFC G NS------E- Site 1763
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -S-L-RPIFK G DE------AK Site 1763
Salmo.salar.CDK1 -T-R-RALFP G DS------E- Site 1763
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -L-R-VPFLP G DS------D- Site 1763
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -N-G-SPLFP G KN------D- Site 1763
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi -Y-G-KTPFQ Q --------I- Site 1763
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -L-G-QPIFP G DS------G- Site 1763
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -S-C-S-FMD G -T------E- Site 1763
Aspergillus.fumigatus.IME2 -T-L-KPLFP G GN------E- Site 1763
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -T-S-EPIFH C RQ------ED Site 1763
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -E-G-FTLFQ T HD------N- Site 1763
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -T-G-KTLFK G KD------Y- Site 1763
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -Q-R-KILFQ A AG------P- Site 1763
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -L-G-WPLYP G AS------E- Site 1763
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -S-N-RPIFP G KH------Y- Site 1763
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -S-G-RPLFP G ST------V- Site 1763
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -A-H-RPLLP G TS------E- Site 1763
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -S-G-APLWP G KS------D- Site 1763
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -R-G-GVLFP G TD------H- Site 1763
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -T-G-KPLFP G ND------H- Site 1763
Candida.glabrata.IME2 -V-F-KPLFP G SN------E- Site 1763
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -M-L-RPLFP G TS------E- Site 1763
Schizosaccharomyces.pombe.IME2 -T-L-QPIFP G ND------D- Site 1763
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -S-G-RPLFP G RD------Y- Site 1763
Species Residue at Site 2630
in 'msaprobs'
muscle

The residue for every species at site 2630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -DAG-RPLFP G SD------V- Site 1763
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -L-G-WPLYP G NN------E- Site 1763
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -R-T-SLPWQ G LK------A- Site 1763
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -T-G-KPLFP G ST------V- Site 1763
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -T-G-QPLWP G KS------D- Site 1763
Branchiostoma.floridae.CDK1 -T-R-RALFP G DS------E- Site 1763
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -V-G-FTLFQ T HD------N- Site 1763
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -L-G-HPLFP G ES------G- Site 1763
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -S-G-DALFP G ES------D- Site 1763
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -L-G-QPIFP G DS------G- Site 1763
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -T-L-RPLFP G AS------E- Site 1763
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -R-G-FTLFQ T HE------N- Site 1763
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -T-G-EPLFS G AN------E- Site 1763
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep VT-R-RALFP G DS------E- Site 1763
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -A-R-RQLFP G KN------Y- Site 1763
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -T-G-RTLFP G TD------H- Site 1763
Lachancea.thermotolerans.SKY1 -T-G-DFLFE P DEGHSYSKD- Site 1763
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -T-G-KTLFA G AH------E- Site 1763
Dictyostelium.discoideum.CDK1 -N-K-KPLFS G DC------E- Site 1763
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -T-G-KILFK G ND------H- Site 1763
Xenopus.tropicalis.IME2 -T-R-RALFP G DS------E- Site 1763
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -L-G-WPLYP G AS------E- Site 1763
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -R-K-EPFFH G HD------N- Site 1763
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -T-R-RALFP G DS------E- Site 1763
Species Residue at Site 2630
in 'msaprobs'
muscle

The residue for every species at site 2630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -T-R-KALFQ G DS------E- Site 1763
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -Q-G-QPLFP G VS------N- Site 1763
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -G-E-KAMFP G NS------T- Site 1763
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -T-G-EPLFS G AN------E- Site 1763
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -L-G-QPIFP G DS------G- Site 1763
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -L-G-QLIFP G DS------G- Site 1763
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -L-H-DPLFP A RT------E- Site 1763
Encephalitozoon.cuniculi.CDK1 -L-M-RPFFP G DS------E- Site 1763
Saccharomyces.kluyveri.IME2 -T-F-RPLFP G SD------E- Site 1763
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -L-G-FTVFQ T HD------S- Site 1763
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -S-N-RPIFP G KH------Y- Site 1763
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -Q-G-QPLFP G VS------N- Site 1763
Cryptococcus.neoformans.IME2 -N-L-KPLFP G VS------E- Site 1763
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -L-G-WPLYP G NN------E- Site 1763
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -T-G-DYLFE P HSGEDYTRD- Site 1763
Candida.lusitaniae.IME2 -N-F-RPIFC G RN------E- Site 1763
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -L-G-WPLYP G AS------E- Site 1763
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -T-S-EPIFH C RQ------ED Site 1763
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -N-N-SPLFP G EN------D- Site 1763
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -S-G-NPLWP G RS------D- Site 1763
Gallus.gallus.CDK2 -T-R-RALFP G DS------E- Site 1763
Emericella.nidulans.CDK1 -T-R-KPLFP G DS------E- Site 1763
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -S-L-QPLFP G VN------E- Site 1763
Homo.sapiens.CDK1 -T-K-KPLFH G DS------E- Site 1763
Candida.albicans.CDK1 -N-R-KPLFP G DS------E- Site 1763
Species Residue at Site 2630
in 'msaprobs'
muscle

The residue for every species at site 2630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -R-K-EPFFH G HD------N- Site 1763
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -A-R-RQLFP G KN------Y- Site 1763
Mus.musculus.ICK..Serine.threonine.protein.kinase. -T-L-RPLFP G AS------E- Site 1763
Saccharomyces.castelli.IME2 -I-F-KPLFP G SN------E- Site 1763
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -L-G-STLFQ T HD------S- Site 1763
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -L-R-VPFLP G DS------D- Site 1763
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -Q-G-VAAFP G MK------D- Site 1763
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -L-G-QPLFP G ES------G- Site 1763
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -G-RRFPMFQ S LD------D- Site 1763
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -L-R-VPFLA G DS------D- Site 1763
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -T-R-SPIMQ G NT------E- Site 1763
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -L-G-WPLYP G AS------E- Site 1763
Acyrthosiphon.pisum.CDK1 -T-L-RPLFP G DS------E- Site 1763
Candida.tropicalis.CDK1 -N-F-VPLFP G SN------E- Site 1763
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -T-S-EPIFH C RQ------ED Site 1763
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -L-G-QPIFP G DS------G- Site 1763
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -R-K-EPFFH G HD------N- Site 1763
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -T-G-RPLFP G ST------V- Site 1763
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -R-K-EPFFY G HD------N- Site 1763
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -S-G-RPLFP G ST------V- Site 1763
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -T-G-KTLFK G KD------Y- Site 1763
Candida.albicans.SSN3..Serine.threonine.protein.ki -S-L-RPIFK G EE------AK Site 1763
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -S-L-FPLFP G TN------E- Site 1763
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -L-G-QPIFP G DS------G- Site 1763
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -N-G-KTLFK G KD------Y- Site 1763
Species Residue at Site 2630
in 'msaprobs'
muscle

The residue for every species at site 2630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -K-G-RPILQ G SS------D- Site 1763
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -R-K-EPFFH G HD------N- Site 1763
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -L-G-WPLYP G AQ------E- Site 1763
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -T-Q-KPLFP G KS------D- Site 1763
Candida.dubliniensis.IME2 -N-F-VPLFP G SN------E- Site 1763
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -L-H-KVLFP G RD------Y- Site 1763
Aspergillus.niger.IME2 -T-L-KPLFP G GN------E- Site 1763
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -T-G-RTLFP G TD------H- Site 1763
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -T-G-NPYLP S SS------D- Site 1763
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -Q-G-VAAFP G MK------D- Site 1763
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -R-K-EPFFH G RD------N- Site 1763
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -T-G-EPLFA G SS------E- Site 1763
Schizosaccharomyces.japonicus.IME2 -T-L-RPIFP G RD------D- Site 1763
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -R-G-RVLFP G GD------H- Site 1763
Gallus.gallus.CDK1 -T-K-KPLFH G DS------E- Site 1763
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -NAG-RPLFP G ND------V- Site 1763
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -L-G-QPLFP G ES------G- Site 1763
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -N-R-VPLFP G PD------E- Site 1763
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -L-G-QPIFP G DS------G- Site 1763
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -T-G-KTLFK G SD------H- Site 1763
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -K-K-EPFFK G SS------N- Site 1763
Kluyveromyces.waltii.IME2 -T-F-RPLFP G SD------E- Site 1763
Debaryomyces.hansenii.SKY1 -T-G-DYLFD P RDGKTYTKD- Site 1763
Saccharomyces.cerevisiae.IME2 -V-F-RALFP G AN------E- Site 1763
Schizosaccharomyces.japonicus.b.IME2 -M-L-RPLFP G RN------E- Site 1763
Species Residue at Site 2630
in 'msaprobs'
muscle

The residue for every species at site 2630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -R-R-KPLFR G NS------D- Site 1763
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -R-K-EPFFH G QD------N- Site 1763
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -T-G-KTLFA G AH------E- Site 1763
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -R-R-KPLFR G SS------D- Site 1763
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -L-G-KPLFS G ES------G- Site 1763
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -T-G-RPLFK G ND------H- Site 1763
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -T-G-HPFLP S SS------D- Site 1763
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -R-G-SVLFP G TD------H- Site 1763
Candida.albicans.IME2 -N-F-VPLFP G SN------E- Site 1763
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -K-R-KPLFC G NS------E- Site 1763
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -S-K-EVLLQ G SS------E- Site 1763
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -T-G-RTLFP G TD------H- Site 1763
Kluyveromyces.lactis.IME2 -T-F-SPLFP G SD------E- Site 1763
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -A-R-RQLFP G KN------Y- Site 1763
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -R-H-KILFP G RS------Y- Site 1763
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -Q-G-KALFP G SD------Y- Site 1763
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -R-G-VLPWQ G MK------A- Site 1763
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -Q-G-KALFP G ND------Y- Site 1763
Amphimedon.queenslandica.CDK1 -T-K-RPLFP G DS------E- Site 1763
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -T-G-QPLWP G KS------D- Site 1763
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -T-R-KALFP G DS------E- Site 1763
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -Q-M-LPLFP G KS------E- Site 1763
Neurospora.crassa.IME2 -T-L-KPLFP G GN------E- Site 1763
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -DAG-RPLFP G SD------V- Site 1763
Dictyostelium.discoideum.DYRK2..Probable.serine.th -T-G-VPLFP G SD------E- Site 1763
Species Residue at Site 2630
in 'msaprobs'
muscle

The residue for every species at site 2630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -R-R-KPLFC G NS------E- Site 1763
Hydra.magnipapillata.CDK1 -T-R-KALFP G DS------E- Site 1763
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -A-H-KPLLP G TS------E- Site 1763
Ashbya.gossypii.IME2 -T-F-KPLFP G AD------E- Site 1763
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi -Y-G-RTPFQ H --------I- Site 1763
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -T-G-QPLFP G ED------E- Site 1763
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -L-G-QPMFP G ES------G- Site 1763
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -L-G-KPLFP G TS------T- Site 1763
Schizosaccharomyces.pombe.b.IME2 -S-L-KPLFP G RN------E- Site 1763
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -S-N-RPIFP G KH------Y- Site 1763
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -L-G-WPLYP G AL------E- Site 1763
Schizosaccharomyces.pombe.CDK1 -R-R-SPLFP G DS------E- Site 1763
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -L-G-FTLFQ T HD------N- Site 1763
Saccoglossus.kowalevskii.CDK1 -T-R-RALFP G DS------E- Site 1763
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -L-G-SLPWQ G LK------A- Site 1763
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -C-H-KILFP G RD------Y- Site 1763
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -T-G-KALFP G DS------E- Site 1763
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -T-C-S-FLN D -T------E- Site 1763
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -T-R-KALFP G DS------E- Site 1763
Yarrowia.lipolytica.IME2 -N-L-KPLFP G TN------E- Site 1763
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -G-L-QPIFK G EE------AK Site 1763
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -T-R-KALFP G DS------E- Site 1763
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -S-RRFPIFQ S MD------D- Site 1763
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -L-G-QPLFP G ES------G- Site 1763
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -L-G-HPLFP G ES------G- Site 1763
Species Residue at Site 2630
in 'msaprobs'
muscle

The residue for every species at site 2630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -T-G-EPLFA G SS------E- Site 1763
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -G-R-RILFQ A QS------P- Site 1763
Scheffersomyces.stipitis.SKY1 -T-G-DYLFD P RDGKTYTKD- Site 1763
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -NAG-RPLFP G ND------V- Site 1763

Generated by PhyloBot at 15:35, October 23rd 2019
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