cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 2628 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2628 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2628 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 2628 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 2628
in 'msaprobs'
muscle

The residue for every species at site 2628 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---T-L-QPI F PGMD------ Site 1761
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---T-G-DHL F KPKSGKGFEK Site 1761
Danio.rerio.CDK1 ---T-R-RAL F PGDS------ Site 1761
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---D-R-KPL F PGRD------ Site 1761
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---NAG-RPL F PGND------ Site 1761
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---NSG-TPL F PGQD------ Site 1761
Candida.guilliermondii.IME2 ---K-V-TPL F PGAN------ Site 1761
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---R-G-SLP W QGLK------ Site 1761
Chlamydomonas.reinhardtii.LF4 ---S-L-FPL F PGTN------ Site 1761
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---I-G-RPL F PGDS------ Site 1761
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---R-G-VLP W QGMK------ Site 1761
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---R-G-QLP W QGLK------ Site 1761
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---T-S-EPI F HCRQ------ Site 1761
Schizosaccharomyces.octosporus.b.IME2 ---T-L-KPL F PGRN------ Site 1761
Candida.albicans.MAPK3..Extracellular.signal.regul ---S-G-RPL F PGRD------ Site 1761
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---R-K-EPF F YGHD------ Site 1761
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---R-G-SLP W QGLK------ Site 1761
Suberites.domuncula.JNK..Stress.activated.protein. ---R-G-DIL L PGKD------ Site 1761
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---R-G-FTL F QTHE------ Site 1761
Aedes.aegypti.CDK1 ---T-R-KPL F QGDS------ Site 1761
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---L-G-FTV F PTHD------ Site 1761
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---V-G-FTL F QTHD------ Site 1761
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---T-G-YPL F PGEN------ Site 1761
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---L-G-WPL Y PGAS------ Site 1761
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---S-G-VPL W PGKS------ Site 1761
Species Residue at Site 2628
in 'msaprobs'
muscle

The residue for every species at site 2628 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---L-L-RPL F SGDS------ Site 1761
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---R-R-EPF F HGQD------ Site 1761
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---S-N-RPI F PGKH------ Site 1761
Strongylocentrotus.purpuratus.CDK1 ---T-R-RAL F PGDS------ Site 1761
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---R-G-SLP W QGLK------ Site 1761
Drosophila.melanogaster.CDK1 ---T-R-KPL F QGDS------ Site 1761
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---R-G-NLP W QGLP------ Site 1761
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---R-G-SLP W QGLK------ Site 1761
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---T-G-DML F APKDGNGYGE Site 1761
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---T-G-RPL F PGST------ Site 1761
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---S-G-SAT F PGMK-----D Site 1761
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---R-G-TVL F PGID------ Site 1761
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---M-G-EPL F PGDS------ Site 1761
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---R-H-KIL F PGRD------ Site 1761
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---T-G-KTL F KGKD------ Site 1761
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---G-R-RIL F QAQS------ Site 1761
Bombus.terrestris.CDK1 ---T-R-RAL F PGDS------ Site 1761
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---T-G-DYL F EPHSGEEYTR Site 1761
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---T-G-EPL F PGDS------ Site 1761
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---K-G-GVL F PGTD------ Site 1761
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---T-K-KPI F QANL------ Site 1761
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---S-L-QPL F PGVN------ Site 1761
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---L-G-EPI F CGEN------ Site 1761
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---L-G-EPI F RGDN------ Site 1761
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---R-G-VLP W QGMK------ Site 1761
Species Residue at Site 2628
in 'msaprobs'
muscle

The residue for every species at site 2628 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---K-G-SLP W QGLK------ Site 1761
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---L-G-WPL Y PGSS------ Site 1761
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---R-K-EPF F YGHD------ Site 1761
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---G-R-RIL F QAQS------ Site 1761
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---S-G-VPL W PGKS------ Site 1761
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---L-G-WPL Y PGAL------ Site 1761
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---T-Q-KPL F PGNS------ Site 1761
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---D-G-QPL F PGES------ Site 1761
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---V-G-FTL F QTHD------ Site 1761
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---T-Q-KPL F PGKS------ Site 1761
Naegleria.gruberi.LF4 ---T-F-EPL F PGEN------ Site 1761
Saccharomyces.bayanus.IME2 ---V-F-RAL F PGAN------ Site 1761
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---R-K-EPF F HGQD------ Site 1761
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---L-G-KPL F KGHD------ Site 1761
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---L-R-TPY L PGTG------ Site 1761
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---V-G-EPL F SGQN------ Site 1761
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---T-G-EPL F SGSN------ Site 1761
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---T-G-YPL L PGED------ Site 1761
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---D-G-QPL F PGES------ Site 1761
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---R-G-QPL F PGTS------ Site 1761
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---Y-G-KTP F QN-------- Site 1761
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---T-G-YPL F PGEN------ Site 1761
Aspergillus.nidulans.IME2 ---T-L-KPL F PGGN------ Site 1761
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---S-GRYPF Y KASD------ Site 1761
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---Q-R-KIL F QAAG------ Site 1761
Species Residue at Site 2628
in 'msaprobs'
muscle

The residue for every species at site 2628 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---T-F-RPL F PGTS------ Site 1761
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---T-R-RAL F PGDS------ Site 1761
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---R-H-KIL F PGRD------ Site 1761
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---L-G-QPL F PGES------ Site 1761
Penicillium.marneffei.IME2 ---T-L-KPL F PGVN------ Site 1761
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---T-G-RTL F PGTD------ Site 1761
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---T-G-RML F AGAH------ Site 1761
Drosophila.melanogaster.MAK ---T-F-RPL F PGSS------ Site 1761
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---T-G-QIL F PGRT------ Site 1761
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---T-G-KIL F PGKT------ Site 1761
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---T-K-KPI F QANL------ Site 1761
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---T-T-KPL F PGKE------ Site 1761
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---A-H-KPL L PGTS------ Site 1761
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---R-H-KIL F PGRD------ Site 1761
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---K-G-CVI F QGTD------ Site 1761
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---L-G-FTV F PTHD------ Site 1761
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---S-GRYPF Y KASD------ Site 1761
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---R-G-VLP W QGMK------ Site 1761
Candida.parapsilosis.IME2 ---N-F-APL F PGAN------ Site 1761
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---A-L-SPL F KGDE------ Site 1761
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---L-G-QPI F PGDS------ Site 1761
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---K-G-CVI F QGTD------ Site 1761
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---R-K-EPF F HGHD------ Site 1761
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---L-G-FTV F QTHD------ Site 1761
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---T-G-KML F AGAH------ Site 1761
Species Residue at Site 2628
in 'msaprobs'
muscle

The residue for every species at site 2628 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---T-G-RPL F PGST------ Site 1761
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---R-K-EPF F HGHD------ Site 1761
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---A-L-RPI F KGEE------ Site 1761
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---T-G-KTL F KGKD------ Site 1761
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---T-G-EPL F SGSN------ Site 1761
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---R-K-EPF F HGHD------ Site 1761
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---L-G-QPL F PGDS------ Site 1761
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---L-G-QPL F PGEN------ Site 1761
Candida.orthopsilosis.IME2 ---N-F-APL F PGAN------ Site 1761
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---L-R-VPF L AGDS------ Site 1761
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---R-G-RVL F PGAD------ Site 1761
Debaryomyces.hansenii.IME2 ---N-F-IPL F PGAS------ Site 1761
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---L-G-QPL F PGES------ Site 1761
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---G-L-RPI F KGEE------ Site 1761
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---S-T-KPL F PGEC------ Site 1761
Caenorhabditis.briggsae.CDK1 ---T-K-KPL F QGDS------ Site 1761
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---R-K-EPF F HGHD------ Site 1761
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---N-G-SPL F PGEN------ Site 1761
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---T-G-QPL F PGED------ Site 1761
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---R-R-KPL F RGNS------ Site 1761
Monosiga.brevicollis.CDK1 ---T-K-RPL F HGDS------ Site 1761
Saccharomyces.cerevisiae.SKY1 ---T-G-DFL F EPDEGHSYTK Site 1761
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---S-G-TPL F PGKD------ Site 1761
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---T-G-EPV F PGDS------ Site 1761
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---L-G-QPI F PGDS------ Site 1761
Species Residue at Site 2628
in 'msaprobs'
muscle

The residue for every species at site 2628 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---R-G-SLP W QGLK------ Site 1761
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---R-G-RPL F PGTS------ Site 1761
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---M-G-QPL F PGES------ Site 1761
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---I-G-RPL I TGNN------ Site 1761
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---D-G-QPL F PGES------ Site 1761
Ajellomyces.capsulatus.CDK1 ---T-R-KPL F PGDS------ Site 1761
Dictystelium.discoideum.MAPK3..Extracellular.signa ---G-R-KPL F QGKD------ Site 1761
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---R-R-KPL F RGSS------ Site 1761
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---A-H-KPL L PGTS------ Site 1761
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---C-H-KIL F PGRD------ Site 1761
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---T-G-KTL F KGKD------ Site 1761
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---N-R-RAL F PGTS------ Site 1761
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---G-R-RIL F QAQS------ Site 1761
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---K-G-AVL F PGTD------ Site 1761
Saccharomyces.cerevisiae.CDK1 ---N-R-KPI F SGDS------ Site 1761
Lodderomyces.elongisporus.IME2 ---N-F-APL F PGSN------ Site 1761
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---T-G-RTL F PGTD------ Site 1761
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---V-G-FTL F QTHD------ Site 1761
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---D-G-QPL F PGES------ Site 1761
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---L-G-QPI F PGES------ Site 1761
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---R-Q-KPL F QGTS------ Site 1761
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---L-G-FTV F QTHD------ Site 1761
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---L-G-WPL Y PGAS------ Site 1761
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---S-G-VPL W PGKS------ Site 1761
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---L-G-QPI F PGDS------ Site 1761
Species Residue at Site 2628
in 'msaprobs'
muscle

The residue for every species at site 2628 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---T-K-KPL F QGDS------ Site 1761
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---R-R-KPL F CGNS------ Site 1761
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---S-L-RPI F KGDE------ Site 1761
Salmo.salar.CDK1 ---T-R-RAL F PGDS------ Site 1761
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---L-R-VPF L PGDS------ Site 1761
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---N-G-SPL F PGKN------ Site 1761
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---Y-G-KTP F QQ-------- Site 1761
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---L-G-QPI F PGDS------ Site 1761
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---S-C-S-F M DG-T------ Site 1761
Aspergillus.fumigatus.IME2 ---T-L-KPL F PGGN------ Site 1761
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---T-S-EPI F HCRQ------ Site 1761
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---E-G-FTL F QTHD------ Site 1761
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---T-G-KTL F KGKD------ Site 1761
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---Q-R-KIL F QAAG------ Site 1761
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---L-G-WPL Y PGAS------ Site 1761
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---S-N-RPI F PGKH------ Site 1761
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---S-G-RPL F PGST------ Site 1761
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---A-H-RPL L PGTS------ Site 1761
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---S-G-APL W PGKS------ Site 1761
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---R-G-GVL F PGTD------ Site 1761
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---T-G-KPL F PGND------ Site 1761
Candida.glabrata.IME2 ---V-F-KPL F PGSN------ Site 1761
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---M-L-RPL F PGTS------ Site 1761
Schizosaccharomyces.pombe.IME2 ---T-L-QPI F PGND------ Site 1761
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---S-G-RPL F PGRD------ Site 1761
Species Residue at Site 2628
in 'msaprobs'
muscle

The residue for every species at site 2628 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---DAG-RPL F PGSD------ Site 1761
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---L-G-WPL Y PGNN------ Site 1761
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---R-T-SLP W QGLK------ Site 1761
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---T-G-KPL F PGST------ Site 1761
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---T-G-QPL W PGKS------ Site 1761
Branchiostoma.floridae.CDK1 ---T-R-RAL F PGDS------ Site 1761
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---V-G-FTL F QTHD------ Site 1761
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---L-G-HPL F PGES------ Site 1761
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---S-G-DAL F PGES------ Site 1761
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---L-G-QPI F PGDS------ Site 1761
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---T-L-RPL F PGAS------ Site 1761
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---R-G-FTL F QTHE------ Site 1761
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---T-G-EPL F SGAN------ Site 1761
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep HPVT-R-RAL F PGDS------ Site 1761
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---A-R-RQL F PGKN------ Site 1761
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---T-G-RTL F PGTD------ Site 1761
Lachancea.thermotolerans.SKY1 ---T-G-DFL F EPDEGHSYSK Site 1761
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---T-G-KTL F AGAH------ Site 1761
Dictyostelium.discoideum.CDK1 ---N-K-KPL F SGDC------ Site 1761
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---T-G-KIL F KGND------ Site 1761
Xenopus.tropicalis.IME2 ---T-R-RAL F PGDS------ Site 1761
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---L-G-WPL Y PGAS------ Site 1761
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---R-K-EPF F HGHD------ Site 1761
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---T-R-RAL F PGDS------ Site 1761
Species Residue at Site 2628
in 'msaprobs'
muscle

The residue for every species at site 2628 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---T-R-KAL F QGDS------ Site 1761
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---Q-G-QPL F PGVS------ Site 1761
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---G-E-KAM F PGNS------ Site 1761
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---T-G-EPL F SGAN------ Site 1761
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---L-G-QPI F PGDS------ Site 1761
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---L-G-QLI F PGDS------ Site 1761
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---L-H-DPL F PART------ Site 1761
Encephalitozoon.cuniculi.CDK1 ---L-M-RPF F PGDS------ Site 1761
Saccharomyces.kluyveri.IME2 ---T-F-RPL F PGSD------ Site 1761
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---L-G-FTV F QTHD------ Site 1761
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---S-N-RPI F PGKH------ Site 1761
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---Q-G-QPL F PGVS------ Site 1761
Cryptococcus.neoformans.IME2 ---N-L-KPL F PGVS------ Site 1761
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---L-G-WPL Y PGNN------ Site 1761
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---T-G-DYL F EPHSGEDYTR Site 1761
Candida.lusitaniae.IME2 ---N-F-RPI F CGRN------ Site 1761
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---L-G-WPL Y PGAS------ Site 1761
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---T-S-EPI F HCRQ------ Site 1761
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---N-N-SPL F PGEN------ Site 1761
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---S-G-NPL W PGRS------ Site 1761
Gallus.gallus.CDK2 ---T-R-RAL F PGDS------ Site 1761
Emericella.nidulans.CDK1 ---T-R-KPL F PGDS------ Site 1761
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---S-L-QPL F PGVN------ Site 1761
Homo.sapiens.CDK1 ---T-K-KPL F HGDS------ Site 1761
Candida.albicans.CDK1 ---N-R-KPL F PGDS------ Site 1761
Species Residue at Site 2628
in 'msaprobs'
muscle

The residue for every species at site 2628 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---R-K-EPF F HGHD------ Site 1761
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---A-R-RQL F PGKN------ Site 1761
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---T-L-RPL F PGAS------ Site 1761
Saccharomyces.castelli.IME2 ---I-F-KPL F PGSN------ Site 1761
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---L-G-STL F QTHD------ Site 1761
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---L-R-VPF L PGDS------ Site 1761
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---Q-G-VAA F PGMK------ Site 1761
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---L-G-QPL F PGES------ Site 1761
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---G-RRFPM F QSLD------ Site 1761
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---L-R-VPF L AGDS------ Site 1761
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---T-R-SPI M QGNT------ Site 1761
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---L-G-WPL Y PGAS------ Site 1761
Acyrthosiphon.pisum.CDK1 ---T-L-RPL F PGDS------ Site 1761
Candida.tropicalis.CDK1 ---N-F-VPL F PGSN------ Site 1761
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---T-S-EPI F HCRQ------ Site 1761
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---L-G-QPI F PGDS------ Site 1761
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---R-K-EPF F HGHD------ Site 1761
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---T-G-RPL F PGST------ Site 1761
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---R-K-EPF F YGHD------ Site 1761
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---S-G-RPL F PGST------ Site 1761
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---T-G-KTL F KGKD------ Site 1761
Candida.albicans.SSN3..Serine.threonine.protein.ki ---S-L-RPI F KGEE------ Site 1761
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---S-L-FPL F PGTN------ Site 1761
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---L-G-QPI F PGDS------ Site 1761
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---N-G-KTL F KGKD------ Site 1761
Species Residue at Site 2628
in 'msaprobs'
muscle

The residue for every species at site 2628 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---K-G-RPI L QGSS------ Site 1761
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---R-K-EPF F HGHD------ Site 1761
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---L-G-WPL Y PGAQ------ Site 1761
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---T-Q-KPL F PGKS------ Site 1761
Candida.dubliniensis.IME2 ---N-F-VPL F PGSN------ Site 1761
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---L-H-KVL F PGRD------ Site 1761
Aspergillus.niger.IME2 ---T-L-KPL F PGGN------ Site 1761
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---T-G-RTL F PGTD------ Site 1761
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---T-G-NPY L PSSS------ Site 1761
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---Q-G-VAA F PGMK------ Site 1761
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---R-K-EPF F HGRD------ Site 1761
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---T-G-EPL F AGSS------ Site 1761
Schizosaccharomyces.japonicus.IME2 ---T-L-RPI F PGRD------ Site 1761
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---R-G-RVL F PGGD------ Site 1761
Gallus.gallus.CDK1 ---T-K-KPL F HGDS------ Site 1761
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---NAG-RPL F PGND------ Site 1761
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---L-G-QPL F PGES------ Site 1761
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---N-R-VPL F PGPD------ Site 1761
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---L-G-QPI F PGDS------ Site 1761
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---T-G-KTL F KGSD------ Site 1761
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---K-K-EPF F KGSS------ Site 1761
Kluyveromyces.waltii.IME2 ---T-F-RPL F PGSD------ Site 1761
Debaryomyces.hansenii.SKY1 ---T-G-DYL F DPRDGKTYTK Site 1761
Saccharomyces.cerevisiae.IME2 ---V-F-RAL F PGAN------ Site 1761
Schizosaccharomyces.japonicus.b.IME2 ---M-L-RPL F PGRN------ Site 1761
Species Residue at Site 2628
in 'msaprobs'
muscle

The residue for every species at site 2628 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---R-R-KPL F RGNS------ Site 1761
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---R-K-EPF F HGQD------ Site 1761
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---T-G-KTL F AGAH------ Site 1761
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---R-R-KPL F RGSS------ Site 1761
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---L-G-KPL F SGES------ Site 1761
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---T-G-RPL F KGND------ Site 1761
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---T-G-HPF L PSSS------ Site 1761
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---R-G-SVL F PGTD------ Site 1761
Candida.albicans.IME2 ---N-F-VPL F PGSN------ Site 1761
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---K-R-KPL F CGNS------ Site 1761
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---S-K-EVL L QGSS------ Site 1761
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---T-G-RTL F PGTD------ Site 1761
Kluyveromyces.lactis.IME2 ---T-F-SPL F PGSD------ Site 1761
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---A-R-RQL F PGKN------ Site 1761
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---R-H-KIL F PGRS------ Site 1761
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---Q-G-KAL F PGSD------ Site 1761
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---R-G-VLP W QGMK------ Site 1761
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---Q-G-KAL F PGND------ Site 1761
Amphimedon.queenslandica.CDK1 ---T-K-RPL F PGDS------ Site 1761
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---T-G-QPL W PGKS------ Site 1761
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---T-R-KAL F PGDS------ Site 1761
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---Q-M-LPL F PGKS------ Site 1761
Neurospora.crassa.IME2 ---T-L-KPL F PGGN------ Site 1761
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---DAG-RPL F PGSD------ Site 1761
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---T-G-VPL F PGSD------ Site 1761
Species Residue at Site 2628
in 'msaprobs'
muscle

The residue for every species at site 2628 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---R-R-KPL F CGNS------ Site 1761
Hydra.magnipapillata.CDK1 ---T-R-KAL F PGDS------ Site 1761
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---A-H-KPL L PGTS------ Site 1761
Ashbya.gossypii.IME2 ---T-F-KPL F PGAD------ Site 1761
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---Y-G-RTP F QH-------- Site 1761
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---T-G-QPL F PGED------ Site 1761
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---L-G-QPM F PGES------ Site 1761
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---L-G-KPL F PGTS------ Site 1761
Schizosaccharomyces.pombe.b.IME2 ---S-L-KPL F PGRN------ Site 1761
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---S-N-RPI F PGKH------ Site 1761
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---L-G-WPL Y PGAL------ Site 1761
Schizosaccharomyces.pombe.CDK1 ---R-R-SPL F PGDS------ Site 1761
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---L-G-FTL F QTHD------ Site 1761
Saccoglossus.kowalevskii.CDK1 ---T-R-RAL F PGDS------ Site 1761
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---L-G-SLP W QGLK------ Site 1761
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---C-H-KIL F PGRD------ Site 1761
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---T-G-KAL F PGDS------ Site 1761
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---T-C-S-F L ND-T------ Site 1761
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---T-R-KAL F PGDS------ Site 1761
Yarrowia.lipolytica.IME2 ---N-L-KPL F PGTN------ Site 1761
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---G-L-QPI F KGEE------ Site 1761
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---T-R-KAL F PGDS------ Site 1761
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---S-RRFPI F QSMD------ Site 1761
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---L-G-QPL F PGES------ Site 1761
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---L-G-HPL F PGES------ Site 1761
Species Residue at Site 2628
in 'msaprobs'
muscle

The residue for every species at site 2628 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---T-G-EPL F AGSS------ Site 1761
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---G-R-RIL F QAQS------ Site 1761
Scheffersomyces.stipitis.SKY1 ---T-G-DYL F DPRDGKTYTK Site 1761
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---NAG-RPL F PGND------ Site 1761

Generated by PhyloBot at 02:20, October 16th 2019
Questions/Comments? help@phylobot.com