cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 2626 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2626 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2626 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 2626 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 2626
in 'msaprobs'
muscle

The residue for every species at site 2626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -----T-L-Q P IFPGMD---- Site 1759
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -----T-G-D H LFKPKSGKGF Site 1759
Danio.rerio.CDK1 -----T-R-R A LFPGDS---- Site 1759
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -----D-R-K P LFPGRD---- Site 1759
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -----NAG-R P LFPGND---- Site 1759
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -----NSG-T P LFPGQD---- Site 1759
Candida.guilliermondii.IME2 -----K-V-T P LFPGAN---- Site 1759
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -----R-G-S L PWQGLK---- Site 1759
Chlamydomonas.reinhardtii.LF4 -----S-L-F P LFPGTN---- Site 1759
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -----I-G-R P LFPGDS---- Site 1759
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -----R-G-V L PWQGMK---- Site 1759
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 -----R-G-Q L PWQGLK---- Site 1759
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -----T-S-E P IFHCRQ---- Site 1759
Schizosaccharomyces.octosporus.b.IME2 -----T-L-K P LFPGRN---- Site 1759
Candida.albicans.MAPK3..Extracellular.signal.regul -----S-G-R P LFPGRD---- Site 1759
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -----R-K-E P FFYGHD---- Site 1759
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -----R-G-S L PWQGLK---- Site 1759
Suberites.domuncula.JNK..Stress.activated.protein. -----R-G-D I LLPGKD---- Site 1759
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -----R-G-F T LFQTHE---- Site 1759
Aedes.aegypti.CDK1 -----T-R-K P LFQGDS---- Site 1759
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -----L-G-F T VFPTHD---- Site 1759
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -----V-G-F T LFQTHD---- Site 1759
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -----T-G-Y P LFPGEN---- Site 1759
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -----L-G-W P LYPGAS---- Site 1759
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -----S-G-V P LWPGKS---- Site 1759
Species Residue at Site 2626
in 'msaprobs'
muscle

The residue for every species at site 2626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -----L-L-R P LFSGDS---- Site 1759
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -----R-R-E P FFHGQD---- Site 1759
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -----S-N-R P IFPGKH---- Site 1759
Strongylocentrotus.purpuratus.CDK1 -----T-R-R A LFPGDS---- Site 1759
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -----R-G-S L PWQGLK---- Site 1759
Drosophila.melanogaster.CDK1 -----T-R-K P LFQGDS---- Site 1759
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -----R-G-N L PWQGLP---- Site 1759
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -----R-G-S L PWQGLK---- Site 1759
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -----T-G-D M LFAPKDGNGY Site 1759
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -----T-G-R P LFPGST---- Site 1759
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -----S-G-S A TFPGMK---- Site 1759
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -----R-G-T V LFPGID---- Site 1759
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -----M-G-E P LFPGDS---- Site 1759
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -----R-H-K I LFPGRD---- Site 1759
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -----T-G-K T LFKGKD---- Site 1759
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -----G-R-R I LFQAQS---- Site 1759
Bombus.terrestris.CDK1 -----T-R-R A LFPGDS---- Site 1759
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -----T-G-D Y LFEPHSGEEY Site 1759
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -----T-G-E P LFPGDS---- Site 1759
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -----K-G-G V LFPGTD---- Site 1759
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -----T-K-K P IFQANL---- Site 1759
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -----S-L-Q P LFPGVN---- Site 1759
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -----L-G-E P IFCGEN---- Site 1759
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -----L-G-E P IFRGDN---- Site 1759
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -----R-G-V L PWQGMK---- Site 1759
Species Residue at Site 2626
in 'msaprobs'
muscle

The residue for every species at site 2626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -----K-G-S L PWQGLK---- Site 1759
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -----L-G-W P LYPGSS---- Site 1759
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -----R-K-E P FFYGHD---- Site 1759
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -----G-R-R I LFQAQS---- Site 1759
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -----S-G-V P LWPGKS---- Site 1759
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -----L-G-W P LYPGAL---- Site 1759
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -----T-Q-K P LFPGNS---- Site 1759
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -----D-G-Q P LFPGES---- Site 1759
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -----V-G-F T LFQTHD---- Site 1759
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -----T-Q-K P LFPGKS---- Site 1759
Naegleria.gruberi.LF4 -----T-F-E P LFPGEN---- Site 1759
Saccharomyces.bayanus.IME2 -----V-F-R A LFPGAN---- Site 1759
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -----R-K-E P FFHGQD---- Site 1759
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -----L-G-K P LFKGHD---- Site 1759
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -----L-R-T P YLPGTG---- Site 1759
Dictyostelium.discoideum.DYRK1..Probable.serine.th -----V-G-E P LFSGQN---- Site 1759
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -----T-G-E P LFSGSN---- Site 1759
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -----T-G-Y P LLPGED---- Site 1759
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -----D-G-Q P LFPGES---- Site 1759
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -----R-G-Q P LFPGTS---- Site 1759
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific -----Y-G-K T PFQN------ Site 1759
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -----T-G-Y P LFPGEN---- Site 1759
Aspergillus.nidulans.IME2 -----T-L-K P LFPGGN---- Site 1759
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -----S-GRY P FYKASD---- Site 1759
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -----Q-R-K I LFQAAG---- Site 1759
Species Residue at Site 2626
in 'msaprobs'
muscle

The residue for every species at site 2626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -----T-F-R P LFPGTS---- Site 1759
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -----T-R-R A LFPGDS---- Site 1759
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -----R-H-K I LFPGRD---- Site 1759
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -----L-G-Q P LFPGES---- Site 1759
Penicillium.marneffei.IME2 -----T-L-K P LFPGVN---- Site 1759
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -----T-G-R T LFPGTD---- Site 1759
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -----T-G-R M LFAGAH---- Site 1759
Drosophila.melanogaster.MAK -----T-F-R P LFPGSS---- Site 1759
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -----T-G-Q I LFPGRT---- Site 1759
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -----T-G-K I LFPGKT---- Site 1759
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -----T-K-K P IFQANL---- Site 1759
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -----T-T-K P LFPGKE---- Site 1759
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -----A-H-K P LLPGTS---- Site 1759
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -----R-H-K I LFPGRD---- Site 1759
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -----K-G-C V IFQGTD---- Site 1759
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -----L-G-F T VFPTHD---- Site 1759
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -----S-GRY P FYKASD---- Site 1759
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -----R-G-V L PWQGMK---- Site 1759
Candida.parapsilosis.IME2 -----N-F-A P LFPGAN---- Site 1759
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -----A-L-S P LFKGDE---- Site 1759
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -----L-G-Q P IFPGDS---- Site 1759
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -----K-G-C V IFQGTD---- Site 1759
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -----R-K-E P FFHGHD---- Site 1759
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -----L-G-F T VFQTHD---- Site 1759
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -----T-G-K M LFAGAH---- Site 1759
Species Residue at Site 2626
in 'msaprobs'
muscle

The residue for every species at site 2626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -----T-G-R P LFPGST---- Site 1759
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -----R-K-E P FFHGHD---- Site 1759
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -----A-L-R P IFKGEE---- Site 1759
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -----T-G-K T LFKGKD---- Site 1759
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -----T-G-E P LFSGSN---- Site 1759
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -----R-K-E P FFHGHD---- Site 1759
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -----L-G-Q P LFPGDS---- Site 1759
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -----L-G-Q P LFPGEN---- Site 1759
Candida.orthopsilosis.IME2 -----N-F-A P LFPGAN---- Site 1759
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -----L-R-V P FLAGDS---- Site 1759
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -----R-G-R V LFPGAD---- Site 1759
Debaryomyces.hansenii.IME2 -----N-F-I P LFPGAS---- Site 1759
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -----L-G-Q P LFPGES---- Site 1759
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -----G-L-R P IFKGEE---- Site 1759
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -----S-T-K P LFPGEC---- Site 1759
Caenorhabditis.briggsae.CDK1 -----T-K-K P LFQGDS---- Site 1759
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -----R-K-E P FFHGHD---- Site 1759
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -----N-G-S P LFPGEN---- Site 1759
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -----T-G-Q P LFPGED---- Site 1759
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -----R-R-K P LFRGNS---- Site 1759
Monosiga.brevicollis.CDK1 -----T-K-R P LFHGDS---- Site 1759
Saccharomyces.cerevisiae.SKY1 -----T-G-D F LFEPDEGHSY Site 1759
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -----S-G-T P LFPGKD---- Site 1759
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -----T-G-E P VFPGDS---- Site 1759
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -----L-G-Q P IFPGDS---- Site 1759
Species Residue at Site 2626
in 'msaprobs'
muscle

The residue for every species at site 2626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -----R-G-S L PWQGLK---- Site 1759
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -----R-G-R P LFPGTS---- Site 1759
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -----M-G-Q P LFPGES---- Site 1759
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -----I-G-R P LITGNN---- Site 1759
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -----D-G-Q P LFPGES---- Site 1759
Ajellomyces.capsulatus.CDK1 -----T-R-K P LFPGDS---- Site 1759
Dictystelium.discoideum.MAPK3..Extracellular.signa -----G-R-K P LFQGKD---- Site 1759
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -----R-R-K P LFRGSS---- Site 1759
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -----A-H-K P LLPGTS---- Site 1759
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -----C-H-K I LFPGRD---- Site 1759
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -----T-G-K T LFKGKD---- Site 1759
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -----N-R-R A LFPGTS---- Site 1759
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -----G-R-R I LFQAQS---- Site 1759
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -----K-G-A V LFPGTD---- Site 1759
Saccharomyces.cerevisiae.CDK1 -----N-R-K P IFSGDS---- Site 1759
Lodderomyces.elongisporus.IME2 -----N-F-A P LFPGSN---- Site 1759
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -----T-G-R T LFPGTD---- Site 1759
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -----V-G-F T LFQTHD---- Site 1759
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -----D-G-Q P LFPGES---- Site 1759
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -----L-G-Q P IFPGES---- Site 1759
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -----R-Q-K P LFQGTS---- Site 1759
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -----L-G-F T VFQTHD---- Site 1759
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -----L-G-W P LYPGAS---- Site 1759
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -----S-G-V P LWPGKS---- Site 1759
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -----L-G-Q P IFPGDS---- Site 1759
Species Residue at Site 2626
in 'msaprobs'
muscle

The residue for every species at site 2626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -----T-K-K P LFQGDS---- Site 1759
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -----R-R-K P LFCGNS---- Site 1759
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -----S-L-R P IFKGDE---- Site 1759
Salmo.salar.CDK1 -----T-R-R A LFPGDS---- Site 1759
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -----L-R-V P FLPGDS---- Site 1759
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -----N-G-S P LFPGKN---- Site 1759
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi -----Y-G-K T PFQQ------ Site 1759
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -----L-G-Q P IFPGDS---- Site 1759
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -----S-C-S - FMDG-T----  
Aspergillus.fumigatus.IME2 -----T-L-K P LFPGGN---- Site 1759
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -----T-S-E P IFHCRQ---- Site 1759
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -----E-G-F T LFQTHD---- Site 1759
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -----T-G-K T LFKGKD---- Site 1759
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -----Q-R-K I LFQAAG---- Site 1759
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -----L-G-W P LYPGAS---- Site 1759
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -----S-N-R P IFPGKH---- Site 1759
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -----S-G-R P LFPGST---- Site 1759
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -----A-H-R P LLPGTS---- Site 1759
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -----S-G-A P LWPGKS---- Site 1759
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -----R-G-G V LFPGTD---- Site 1759
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -----T-G-K P LFPGND---- Site 1759
Candida.glabrata.IME2 -----V-F-K P LFPGSN---- Site 1759
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -----M-L-R P LFPGTS---- Site 1759
Schizosaccharomyces.pombe.IME2 -----T-L-Q P IFPGND---- Site 1759
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -----S-G-R P LFPGRD---- Site 1759
Species Residue at Site 2626
in 'msaprobs'
muscle

The residue for every species at site 2626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -----DAG-R P LFPGSD---- Site 1759
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -----L-G-W P LYPGNN---- Site 1759
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -----R-T-S L PWQGLK---- Site 1759
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -----T-G-K P LFPGST---- Site 1759
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -----T-G-Q P LWPGKS---- Site 1759
Branchiostoma.floridae.CDK1 -----T-R-R A LFPGDS---- Site 1759
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -----V-G-F T LFQTHD---- Site 1759
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -----L-G-H P LFPGES---- Site 1759
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -----S-G-D A LFPGES---- Site 1759
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -----L-G-Q P IFPGDS---- Site 1759
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -----T-L-R P LFPGAS---- Site 1759
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -----R-G-F T LFQTHE---- Site 1759
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -----T-G-E P LFSGAN---- Site 1759
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep APHPVT-R-R A LFPGDS---- Site 1759
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -----A-R-R Q LFPGKN---- Site 1759
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -----T-G-R T LFPGTD---- Site 1759
Lachancea.thermotolerans.SKY1 -----T-G-D F LFEPDEGHSY Site 1759
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -----T-G-K T LFAGAH---- Site 1759
Dictyostelium.discoideum.CDK1 -----N-K-K P LFSGDC---- Site 1759
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -----T-G-K I LFKGND---- Site 1759
Xenopus.tropicalis.IME2 -----T-R-R A LFPGDS---- Site 1759
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -----L-G-W P LYPGAS---- Site 1759
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -----R-K-E P FFHGHD---- Site 1759
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -----T-R-R A LFPGDS---- Site 1759
Species Residue at Site 2626
in 'msaprobs'
muscle

The residue for every species at site 2626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -----T-R-K A LFQGDS---- Site 1759
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -----Q-G-Q P LFPGVS---- Site 1759
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -----G-E-K A MFPGNS---- Site 1759
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -----T-G-E P LFSGAN---- Site 1759
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -----L-G-Q P IFPGDS---- Site 1759
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -----L-G-Q L IFPGDS---- Site 1759
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -----L-H-D P LFPART---- Site 1759
Encephalitozoon.cuniculi.CDK1 -----L-M-R P FFPGDS---- Site 1759
Saccharomyces.kluyveri.IME2 -----T-F-R P LFPGSD---- Site 1759
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -----L-G-F T VFQTHD---- Site 1759
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -----S-N-R P IFPGKH---- Site 1759
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -----Q-G-Q P LFPGVS---- Site 1759
Cryptococcus.neoformans.IME2 -----N-L-K P LFPGVS---- Site 1759
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -----L-G-W P LYPGNN---- Site 1759
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -----T-G-D Y LFEPHSGEDY Site 1759
Candida.lusitaniae.IME2 -----N-F-R P IFCGRN---- Site 1759
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -----L-G-W P LYPGAS---- Site 1759
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -----T-S-E P IFHCRQ---- Site 1759
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -----N-N-S P LFPGEN---- Site 1759
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -----S-G-N P LWPGRS---- Site 1759
Gallus.gallus.CDK2 -----T-R-R A LFPGDS---- Site 1759
Emericella.nidulans.CDK1 -----T-R-K P LFPGDS---- Site 1759
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -----S-L-Q P LFPGVN---- Site 1759
Homo.sapiens.CDK1 -----T-K-K P LFHGDS---- Site 1759
Candida.albicans.CDK1 -----N-R-K P LFPGDS---- Site 1759
Species Residue at Site 2626
in 'msaprobs'
muscle

The residue for every species at site 2626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -----R-K-E P FFHGHD---- Site 1759
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -----A-R-R Q LFPGKN---- Site 1759
Mus.musculus.ICK..Serine.threonine.protein.kinase. -----T-L-R P LFPGAS---- Site 1759
Saccharomyces.castelli.IME2 -----I-F-K P LFPGSN---- Site 1759
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -----L-G-S T LFQTHD---- Site 1759
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -----L-R-V P FLPGDS---- Site 1759
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -----Q-G-V A AFPGMK---- Site 1759
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -----L-G-Q P LFPGES---- Site 1759
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -----G-RRF P MFQSLD---- Site 1759
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -----L-R-V P FLAGDS---- Site 1759
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -----T-R-S P IMQGNT---- Site 1759
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -----L-G-W P LYPGAS---- Site 1759
Acyrthosiphon.pisum.CDK1 -----T-L-R P LFPGDS---- Site 1759
Candida.tropicalis.CDK1 -----N-F-V P LFPGSN---- Site 1759
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -----T-S-E P IFHCRQ---- Site 1759
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -----L-G-Q P IFPGDS---- Site 1759
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -----R-K-E P FFHGHD---- Site 1759
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -----T-G-R P LFPGST---- Site 1759
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -----R-K-E P FFYGHD---- Site 1759
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -----S-G-R P LFPGST---- Site 1759
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -----T-G-K T LFKGKD---- Site 1759
Candida.albicans.SSN3..Serine.threonine.protein.ki -----S-L-R P IFKGEE---- Site 1759
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -----S-L-F P LFPGTN---- Site 1759
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -----L-G-Q P IFPGDS---- Site 1759
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -----N-G-K T LFKGKD---- Site 1759
Species Residue at Site 2626
in 'msaprobs'
muscle

The residue for every species at site 2626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -----K-G-R P ILQGSS---- Site 1759
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -----R-K-E P FFHGHD---- Site 1759
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -----L-G-W P LYPGAQ---- Site 1759
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -----T-Q-K P LFPGKS---- Site 1759
Candida.dubliniensis.IME2 -----N-F-V P LFPGSN---- Site 1759
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -----L-H-K V LFPGRD---- Site 1759
Aspergillus.niger.IME2 -----T-L-K P LFPGGN---- Site 1759
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -----T-G-R T LFPGTD---- Site 1759
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -----T-G-N P YLPSSS---- Site 1759
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -----Q-G-V A AFPGMK---- Site 1759
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -----R-K-E P FFHGRD---- Site 1759
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -----T-G-E P LFAGSS---- Site 1759
Schizosaccharomyces.japonicus.IME2 -----T-L-R P IFPGRD---- Site 1759
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -----R-G-R V LFPGGD---- Site 1759
Gallus.gallus.CDK1 -----T-K-K P LFHGDS---- Site 1759
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -----NAG-R P LFPGND---- Site 1759
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -----L-G-Q P LFPGES---- Site 1759
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -----N-R-V P LFPGPD---- Site 1759
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -----L-G-Q P IFPGDS---- Site 1759
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -----T-G-K T LFKGSD---- Site 1759
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -----K-K-E P FFKGSS---- Site 1759
Kluyveromyces.waltii.IME2 -----T-F-R P LFPGSD---- Site 1759
Debaryomyces.hansenii.SKY1 -----T-G-D Y LFDPRDGKTY Site 1759
Saccharomyces.cerevisiae.IME2 -----V-F-R A LFPGAN---- Site 1759
Schizosaccharomyces.japonicus.b.IME2 -----M-L-R P LFPGRN---- Site 1759
Species Residue at Site 2626
in 'msaprobs'
muscle

The residue for every species at site 2626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -----R-R-K P LFRGNS---- Site 1759
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -----R-K-E P FFHGQD---- Site 1759
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -----T-G-K T LFAGAH---- Site 1759
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -----R-R-K P LFRGSS---- Site 1759
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -----L-G-K P LFSGES---- Site 1759
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -----T-G-R P LFKGND---- Site 1759
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -----T-G-H P FLPSSS---- Site 1759
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -----R-G-S V LFPGTD---- Site 1759
Candida.albicans.IME2 -----N-F-V P LFPGSN---- Site 1759
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -----K-R-K P LFCGNS---- Site 1759
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -----S-K-E V LLQGSS---- Site 1759
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -----T-G-R T LFPGTD---- Site 1759
Kluyveromyces.lactis.IME2 -----T-F-S P LFPGSD---- Site 1759
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -----A-R-R Q LFPGKN---- Site 1759
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -----R-H-K I LFPGRS---- Site 1759
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -----Q-G-K A LFPGSD---- Site 1759
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -----R-G-V L PWQGMK---- Site 1759
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -----Q-G-K A LFPGND---- Site 1759
Amphimedon.queenslandica.CDK1 -----T-K-R P LFPGDS---- Site 1759
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -----T-G-Q P LWPGKS---- Site 1759
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -----T-R-K A LFPGDS---- Site 1759
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -----Q-M-L P LFPGKS---- Site 1759
Neurospora.crassa.IME2 -----T-L-K P LFPGGN---- Site 1759
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -----DAG-R P LFPGSD---- Site 1759
Dictyostelium.discoideum.DYRK2..Probable.serine.th -----T-G-V P LFPGSD---- Site 1759
Species Residue at Site 2626
in 'msaprobs'
muscle

The residue for every species at site 2626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -----R-R-K P LFCGNS---- Site 1759
Hydra.magnipapillata.CDK1 -----T-R-K A LFPGDS---- Site 1759
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -----A-H-K P LLPGTS---- Site 1759
Ashbya.gossypii.IME2 -----T-F-K P LFPGAD---- Site 1759
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi -----Y-G-R T PFQH------ Site 1759
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -----T-G-Q P LFPGED---- Site 1759
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -----L-G-Q P MFPGES---- Site 1759
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -----L-G-K P LFPGTS---- Site 1759
Schizosaccharomyces.pombe.b.IME2 -----S-L-K P LFPGRN---- Site 1759
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -----S-N-R P IFPGKH---- Site 1759
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -----L-G-W P LYPGAL---- Site 1759
Schizosaccharomyces.pombe.CDK1 -----R-R-S P LFPGDS---- Site 1759
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -----L-G-F T LFQTHD---- Site 1759
Saccoglossus.kowalevskii.CDK1 -----T-R-R A LFPGDS---- Site 1759
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -----L-G-S L PWQGLK---- Site 1759
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -----C-H-K I LFPGRD---- Site 1759
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -----T-G-K A LFPGDS---- Site 1759
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -----T-C-S - FLND-T----  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -----T-R-K A LFPGDS---- Site 1759
Yarrowia.lipolytica.IME2 -----N-L-K P LFPGTN---- Site 1759
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -----G-L-Q P IFKGEE---- Site 1759
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -----T-R-K A LFPGDS---- Site 1759
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -----S-RRF P IFQSMD---- Site 1759
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -----L-G-Q P LFPGES---- Site 1759
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -----L-G-H P LFPGES---- Site 1759
Species Residue at Site 2626
in 'msaprobs'
muscle

The residue for every species at site 2626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -----T-G-E P LFAGSS---- Site 1759
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -----G-R-R I LFQAQS---- Site 1759
Scheffersomyces.stipitis.SKY1 -----T-G-D Y LFDPRDGKTY Site 1759
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -----NAG-R P LFPGND---- Site 1759

Generated by PhyloBot at 16:19, October 23rd 2019
Questions/Comments? help@phylobot.com