cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 2625 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2625 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2625 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 2625 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 2625
in 'msaprobs'
muscle

The residue for every species at site 2625 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ------T-L- Q PIFPGMD--- Site 1757
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ------T-G- D HLFKPKSGKG Site 1757
Danio.rerio.CDK1 ------T-R- R ALFPGDS--- Site 1757
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ------D-R- K PLFPGRD--- Site 1757
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ------NAG- R PLFPGND--- Site 1757
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ------NSG- T PLFPGQD--- Site 1757
Candida.guilliermondii.IME2 ------K-V- T PLFPGAN--- Site 1758
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ------R-G- S LPWQGLK--- Site 1757
Chlamydomonas.reinhardtii.LF4 ------S-L- F PLFPGTN--- Site 1757
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ------I-G- R PLFPGDS--- Site 1757
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ------R-G- V LPWQGMK--- Site 1757
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ------R-G- Q LPWQGLK--- Site 1757
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ------T-S- E PIFHCRQ--- Site 1757
Schizosaccharomyces.octosporus.b.IME2 ------T-L- K PLFPGRN--- Site 1757
Candida.albicans.MAPK3..Extracellular.signal.regul ------S-G- R PLFPGRD--- Site 1757
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ------R-K- E PFFYGHD--- Site 1757
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ------R-G- S LPWQGLK--- Site 1757
Suberites.domuncula.JNK..Stress.activated.protein. ------R-G- D ILLPGKD--- Site 1757
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ------R-G- F TLFQTHE--- Site 1757
Aedes.aegypti.CDK1 ------T-R- K PLFQGDS--- Site 1757
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ------L-G- F TVFPTHD--- Site 1757
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ------V-G- F TLFQTHD--- Site 1757
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ------T-G- Y PLFPGEN--- Site 1757
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ------L-G- W PLYPGAS--- Site 1757
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ------S-G- V PLWPGKS--- Site 1757
Species Residue at Site 2625
in 'msaprobs'
muscle

The residue for every species at site 2625 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ------L-L- R PLFSGDS--- Site 1757
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ------R-R- E PFFHGQD--- Site 1757
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ------S-N- R PIFPGKH--- Site 1757
Strongylocentrotus.purpuratus.CDK1 ------T-R- R ALFPGDS--- Site 1757
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ------R-G- S LPWQGLK--- Site 1757
Drosophila.melanogaster.CDK1 ------T-R- K PLFQGDS--- Site 1757
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ------R-G- N LPWQGLP--- Site 1757
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ------R-G- S LPWQGLK--- Site 1757
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ------T-G- D MLFAPKDGNG Site 1757
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ------T-G- R PLFPGST--- Site 1757
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ------S-G- S ATFPGMK--- Site 1757
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ------R-G- T VLFPGID--- Site 1757
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ------M-G- E PLFPGDS--- Site 1757
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ------R-H- K ILFPGRD--- Site 1757
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ------T-G- K TLFKGKD--- Site 1757
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ------G-R- R ILFQAQS--- Site 1758
Bombus.terrestris.CDK1 ------T-R- R ALFPGDS--- Site 1757
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ------T-G- D YLFEPHSGEE Site 1757
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ------T-G- E PLFPGDS--- Site 1757
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ------K-G- G VLFPGTD--- Site 1757
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ------T-K- K PIFQANL--- Site 1757
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ------S-L- Q PLFPGVN--- Site 1757
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ------L-G- E PIFCGEN--- Site 1757
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ------L-G- E PIFRGDN--- Site 1757
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ------R-G- V LPWQGMK--- Site 1757
Species Residue at Site 2625
in 'msaprobs'
muscle

The residue for every species at site 2625 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ------K-G- S LPWQGLK--- Site 1757
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ------L-G- W PLYPGSS--- Site 1757
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ------R-K- E PFFYGHD--- Site 1757
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ------G-R- R ILFQAQS--- Site 1758
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ------S-G- V PLWPGKS--- Site 1757
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ------L-G- W PLYPGAL--- Site 1757
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ------T-Q- K PLFPGNS--- Site 1757
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ------D-G- Q PLFPGES--- Site 1757
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ------V-G- F TLFQTHD--- Site 1757
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ------T-Q- K PLFPGKS--- Site 1757
Naegleria.gruberi.LF4 ------T-F- E PLFPGEN--- Site 1757
Saccharomyces.bayanus.IME2 ------V-F- R ALFPGAN--- Site 1757
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ------R-K- E PFFHGQD--- Site 1757
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ------L-G- K PLFKGHD--- Site 1757
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ------L-R- T PYLPGTG--- Site 1757
Dictyostelium.discoideum.DYRK1..Probable.serine.th ------V-G- E PLFSGQN--- Site 1757
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ------T-G- E PLFSGSN--- Site 1757
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ------T-G- Y PLLPGED--- Site 1757
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ------D-G- Q PLFPGES--- Site 1757
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ------R-G- Q PLFPGTS--- Site 1757
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ------Y-G- K TPFQN----- Site 1757
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ------T-G- Y PLFPGEN--- Site 1757
Aspergillus.nidulans.IME2 ------T-L- K PLFPGGN--- Site 1757
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ------S-GR Y PFYKASD--- Site 1758
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ------Q-R- K ILFQAAG--- Site 1757
Species Residue at Site 2625
in 'msaprobs'
muscle

The residue for every species at site 2625 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ------T-F- R PLFPGTS--- Site 1757
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ------T-R- R ALFPGDS--- Site 1757
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ------R-H- K ILFPGRD--- Site 1757
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ------L-G- Q PLFPGES--- Site 1757
Penicillium.marneffei.IME2 ------T-L- K PLFPGVN--- Site 1757
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ------T-G- R TLFPGTD--- Site 1757
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ------T-G- R MLFAGAH--- Site 1757
Drosophila.melanogaster.MAK ------T-F- R PLFPGSS--- Site 1757
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ------T-G- Q ILFPGRT--- Site 1757
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ------T-G- K ILFPGKT--- Site 1757
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ------T-K- K PIFQANL--- Site 1757
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ------T-T- K PLFPGKE--- Site 1757
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ------A-H- K PLLPGTS--- Site 1757
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ------R-H- K ILFPGRD--- Site 1757
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ------K-G- C VIFQGTD--- Site 1757
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ------L-G- F TVFPTHD--- Site 1757
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ------S-GR Y PFYKASD--- Site 1758
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ------R-G- V LPWQGMK--- Site 1757
Candida.parapsilosis.IME2 ------N-F- A PLFPGAN--- Site 1757
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ------A-L- S PLFKGDE--- Site 1757
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ------L-G- Q PIFPGDS--- Site 1757
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ------K-G- C VIFQGTD--- Site 1757
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ------R-K- E PFFHGHD--- Site 1757
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ------L-G- F TVFQTHD--- Site 1757
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ------T-G- K MLFAGAH--- Site 1757
Species Residue at Site 2625
in 'msaprobs'
muscle

The residue for every species at site 2625 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ------T-G- R PLFPGST--- Site 1757
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ------R-K- E PFFHGHD--- Site 1757
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ------A-L- R PIFKGEE--- Site 1757
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ------T-G- K TLFKGKD--- Site 1757
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ------T-G- E PLFSGSN--- Site 1757
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ------R-K- E PFFHGHD--- Site 1757
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ------L-G- Q PLFPGDS--- Site 1757
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ------L-G- Q PLFPGEN--- Site 1757
Candida.orthopsilosis.IME2 ------N-F- A PLFPGAN--- Site 1758
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ------L-R- V PFLAGDS--- Site 1757
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ------R-G- R VLFPGAD--- Site 1757
Debaryomyces.hansenii.IME2 ------N-F- I PLFPGAS--- Site 1758
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ------L-G- Q PLFPGES--- Site 1757
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ------G-L- R PIFKGEE--- Site 1758
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ------S-T- K PLFPGEC--- Site 1757
Caenorhabditis.briggsae.CDK1 ------T-K- K PLFQGDS--- Site 1757
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ------R-K- E PFFHGHD--- Site 1757
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ------N-G- S PLFPGEN--- Site 1757
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ------T-G- Q PLFPGED--- Site 1757
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ------R-R- K PLFRGNS--- Site 1757
Monosiga.brevicollis.CDK1 ------T-K- R PLFHGDS--- Site 1757
Saccharomyces.cerevisiae.SKY1 ------T-G- D FLFEPDEGHS Site 1757
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ------S-G- T PLFPGKD--- Site 1757
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ------T-G- E PVFPGDS--- Site 1757
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ------L-G- Q PIFPGDS--- Site 1757
Species Residue at Site 2625
in 'msaprobs'
muscle

The residue for every species at site 2625 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ------R-G- S LPWQGLK--- Site 1757
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ------R-G- R PLFPGTS--- Site 1757
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ------M-G- Q PLFPGES--- Site 1757
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ------I-G- R PLITGNN--- Site 1757
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ------D-G- Q PLFPGES--- Site 1757
Ajellomyces.capsulatus.CDK1 ------T-R- K PLFPGDS--- Site 1757
Dictystelium.discoideum.MAPK3..Extracellular.signa ------G-R- K PLFQGKD--- Site 1758
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ------R-R- K PLFRGSS--- Site 1757
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ------A-H- K PLLPGTS--- Site 1757
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ------C-H- K ILFPGRD--- Site 1757
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ------T-G- K TLFKGKD--- Site 1757
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ------N-R- R ALFPGTS--- Site 1757
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ------G-R- R ILFQAQS--- Site 1758
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ------K-G- A VLFPGTD--- Site 1757
Saccharomyces.cerevisiae.CDK1 ------N-R- K PIFSGDS--- Site 1757
Lodderomyces.elongisporus.IME2 ------N-F- A PLFPGSN--- Site 1757
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ------T-G- R TLFPGTD--- Site 1757
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ------V-G- F TLFQTHD--- Site 1757
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ------D-G- Q PLFPGES--- Site 1757
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ------L-G- Q PIFPGES--- Site 1757
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ------R-Q- K PLFQGTS--- Site 1757
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ------L-G- F TVFQTHD--- Site 1757
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ------L-G- W PLYPGAS--- Site 1757
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ------S-G- V PLWPGKS--- Site 1757
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ------L-G- Q PIFPGDS--- Site 1757
Species Residue at Site 2625
in 'msaprobs'
muscle

The residue for every species at site 2625 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ------T-K- K PLFQGDS--- Site 1757
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ------R-R- K PLFCGNS--- Site 1757
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ------S-L- R PIFKGDE--- Site 1757
Salmo.salar.CDK1 ------T-R- R ALFPGDS--- Site 1757
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ------L-R- V PFLPGDS--- Site 1757
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ------N-G- S PLFPGKN--- Site 1757
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ------Y-G- K TPFQQ----- Site 1757
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ------L-G- Q PIFPGDS--- Site 1757
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ------S-C- S -FMDG-T--- Site 1759
Aspergillus.fumigatus.IME2 ------T-L- K PLFPGGN--- Site 1757
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ------T-S- E PIFHCRQ--- Site 1757
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ------E-G- F TLFQTHD--- Site 1757
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ------T-G- K TLFKGKD--- Site 1757
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ------Q-R- K ILFQAAG--- Site 1757
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ------L-G- W PLYPGAS--- Site 1757
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ------S-N- R PIFPGKH--- Site 1757
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ------S-G- R PLFPGST--- Site 1757
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ------A-H- R PLLPGTS--- Site 1757
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ------S-G- A PLWPGKS--- Site 1757
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ------R-G- G VLFPGTD--- Site 1757
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ------T-G- K PLFPGND--- Site 1757
Candida.glabrata.IME2 ------V-F- K PLFPGSN--- Site 1757
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ------M-L- R PLFPGTS--- Site 1757
Schizosaccharomyces.pombe.IME2 ------T-L- Q PIFPGND--- Site 1757
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ------S-G- R PLFPGRD--- Site 1757
Species Residue at Site 2625
in 'msaprobs'
muscle

The residue for every species at site 2625 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ------DAG- R PLFPGSD--- Site 1757
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ------L-G- W PLYPGNN--- Site 1757
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ------R-T- S LPWQGLK--- Site 1758
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ------T-G- K PLFPGST--- Site 1757
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ------T-G- Q PLWPGKS--- Site 1757
Branchiostoma.floridae.CDK1 ------T-R- R ALFPGDS--- Site 1757
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ------V-G- F TLFQTHD--- Site 1757
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ------L-G- H PLFPGES--- Site 1757
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ------S-G- D ALFPGES--- Site 1757
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ------L-G- Q PIFPGDS--- Site 1757
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ------T-L- R PLFPGAS--- Site 1757
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ------R-G- F TLFQTHE--- Site 1757
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ------T-G- E PLFSGAN--- Site 1757
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep SAPHPVT-R- R ALFPGDS--- Site 1757
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ------A-R- R QLFPGKN--- Site 1757
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ------T-G- R TLFPGTD--- Site 1757
Lachancea.thermotolerans.SKY1 ------T-G- D FLFEPDEGHS Site 1757
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ------T-G- K TLFAGAH--- Site 1757
Dictyostelium.discoideum.CDK1 ------N-K- K PLFSGDC--- Site 1757
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ------T-G- K ILFKGND--- Site 1757
Xenopus.tropicalis.IME2 ------T-R- R ALFPGDS--- Site 1757
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ------L-G- W PLYPGAS--- Site 1757
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ------R-K- E PFFHGHD--- Site 1757
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ------T-R- R ALFPGDS--- Site 1757
Species Residue at Site 2625
in 'msaprobs'
muscle

The residue for every species at site 2625 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ------T-R- K ALFQGDS--- Site 1757
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ------Q-G- Q PLFPGVS--- Site 1757
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ------G-E- K AMFPGNS--- Site 1758
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ------T-G- E PLFSGAN--- Site 1757
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ------L-G- Q PIFPGDS--- Site 1757
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ------L-G- Q LIFPGDS--- Site 1757
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ------L-H- D PLFPART--- Site 1757
Encephalitozoon.cuniculi.CDK1 ------L-M- R PFFPGDS--- Site 1757
Saccharomyces.kluyveri.IME2 ------T-F- R PLFPGSD--- Site 1757
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ------L-G- F TVFQTHD--- Site 1757
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ------S-N- R PIFPGKH--- Site 1757
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ------Q-G- Q PLFPGVS--- Site 1757
Cryptococcus.neoformans.IME2 ------N-L- K PLFPGVS--- Site 1757
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ------L-G- W PLYPGNN--- Site 1757
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ------T-G- D YLFEPHSGED Site 1757
Candida.lusitaniae.IME2 ------N-F- R PIFCGRN--- Site 1757
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ------L-G- W PLYPGAS--- Site 1757
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ------T-S- E PIFHCRQ--- Site 1757
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ------N-N- S PLFPGEN--- Site 1757
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ------S-G- N PLWPGRS--- Site 1757
Gallus.gallus.CDK2 ------T-R- R ALFPGDS--- Site 1757
Emericella.nidulans.CDK1 ------T-R- K PLFPGDS--- Site 1757
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ------S-L- Q PLFPGVN--- Site 1757
Homo.sapiens.CDK1 ------T-K- K PLFHGDS--- Site 1757
Candida.albicans.CDK1 ------N-R- K PLFPGDS--- Site 1757
Species Residue at Site 2625
in 'msaprobs'
muscle

The residue for every species at site 2625 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ------R-K- E PFFHGHD--- Site 1757
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ------A-R- R QLFPGKN--- Site 1757
Mus.musculus.ICK..Serine.threonine.protein.kinase. ------T-L- R PLFPGAS--- Site 1757
Saccharomyces.castelli.IME2 ------I-F- K PLFPGSN--- Site 1757
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ------L-G- S TLFQTHD--- Site 1757
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ------L-R- V PFLPGDS--- Site 1757
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ------Q-G- V AAFPGMK--- Site 1757
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ------L-G- Q PLFPGES--- Site 1757
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ------G-RR F PMFQSLD--- Site 1758
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ------L-R- V PFLAGDS--- Site 1757
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ------T-R- S PIMQGNT--- Site 1757
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ------L-G- W PLYPGAS--- Site 1757
Acyrthosiphon.pisum.CDK1 ------T-L- R PLFPGDS--- Site 1757
Candida.tropicalis.CDK1 ------N-F- V PLFPGSN--- Site 1758
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ------T-S- E PIFHCRQ--- Site 1757
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ------L-G- Q PIFPGDS--- Site 1757
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ------R-K- E PFFHGHD--- Site 1757
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ------T-G- R PLFPGST--- Site 1757
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ------R-K- E PFFYGHD--- Site 1757
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ------S-G- R PLFPGST--- Site 1757
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ------T-G- K TLFKGKD--- Site 1757
Candida.albicans.SSN3..Serine.threonine.protein.ki ------S-L- R PIFKGEE--- Site 1757
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ------S-L- F PLFPGTN--- Site 1757
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ------L-G- Q PIFPGDS--- Site 1757
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ------N-G- K TLFKGKD--- Site 1757
Species Residue at Site 2625
in 'msaprobs'
muscle

The residue for every species at site 2625 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ------K-G- R PILQGSS--- Site 1757
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ------R-K- E PFFHGHD--- Site 1757
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ------L-G- W PLYPGAQ--- Site 1757
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ------T-Q- K PLFPGKS--- Site 1757
Candida.dubliniensis.IME2 ------N-F- V PLFPGSN--- Site 1758
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ------L-H- K VLFPGRD--- Site 1757
Aspergillus.niger.IME2 ------T-L- K PLFPGGN--- Site 1757
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ------T-G- R TLFPGTD--- Site 1757
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ------T-G- N PYLPSSS--- Site 1757
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ------Q-G- V AAFPGMK--- Site 1757
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ------R-K- E PFFHGRD--- Site 1757
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ------T-G- E PLFAGSS--- Site 1757
Schizosaccharomyces.japonicus.IME2 ------T-L- R PIFPGRD--- Site 1757
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ------R-G- R VLFPGGD--- Site 1757
Gallus.gallus.CDK1 ------T-K- K PLFHGDS--- Site 1757
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ------NAG- R PLFPGND--- Site 1757
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ------L-G- Q PLFPGES--- Site 1757
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ------N-R- V PLFPGPD--- Site 1757
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ------L-G- Q PIFPGDS--- Site 1757
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ------T-G- K TLFKGSD--- Site 1757
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ------K-K- E PFFKGSS--- Site 1757
Kluyveromyces.waltii.IME2 ------T-F- R PLFPGSD--- Site 1757
Debaryomyces.hansenii.SKY1 ------T-G- D YLFDPRDGKT Site 1757
Saccharomyces.cerevisiae.IME2 ------V-F- R ALFPGAN--- Site 1757
Schizosaccharomyces.japonicus.b.IME2 ------M-L- R PLFPGRN--- Site 1757
Species Residue at Site 2625
in 'msaprobs'
muscle

The residue for every species at site 2625 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ------R-R- K PLFRGNS--- Site 1757
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ------R-K- E PFFHGQD--- Site 1757
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ------T-G- K TLFAGAH--- Site 1757
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ------R-R- K PLFRGSS--- Site 1757
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ------L-G- K PLFSGES--- Site 1757
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ------T-G- R PLFKGND--- Site 1757
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ------T-G- H PFLPSSS--- Site 1757
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ------R-G- S VLFPGTD--- Site 1757
Candida.albicans.IME2 ------N-F- V PLFPGSN--- Site 1758
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ------K-R- K PLFCGNS--- Site 1757
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ------S-K- E VLLQGSS--- Site 1757
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ------T-G- R TLFPGTD--- Site 1757
Kluyveromyces.lactis.IME2 ------T-F- S PLFPGSD--- Site 1757
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ------A-R- R QLFPGKN--- Site 1757
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ------R-H- K ILFPGRS--- Site 1757
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ------Q-G- K ALFPGSD--- Site 1757
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ------R-G- V LPWQGMK--- Site 1757
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ------Q-G- K ALFPGND--- Site 1757
Amphimedon.queenslandica.CDK1 ------T-K- R PLFPGDS--- Site 1757
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ------T-G- Q PLWPGKS--- Site 1757
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ------T-R- K ALFPGDS--- Site 1757
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ------Q-M- L PLFPGKS--- Site 1757
Neurospora.crassa.IME2 ------T-L- K PLFPGGN--- Site 1757
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ------DAG- R PLFPGSD--- Site 1757
Dictyostelium.discoideum.DYRK2..Probable.serine.th ------T-G- V PLFPGSD--- Site 1757
Species Residue at Site 2625
in 'msaprobs'
muscle

The residue for every species at site 2625 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ------R-R- K PLFCGNS--- Site 1757
Hydra.magnipapillata.CDK1 ------T-R- K ALFPGDS--- Site 1757
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ------A-H- K PLLPGTS--- Site 1757
Ashbya.gossypii.IME2 ------T-F- K PLFPGAD--- Site 1757
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ------Y-G- R TPFQH----- Site 1757
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ------T-G- Q PLFPGED--- Site 1757
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ------L-G- Q PMFPGES--- Site 1757
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ------L-G- K PLFPGTS--- Site 1757
Schizosaccharomyces.pombe.b.IME2 ------S-L- K PLFPGRN--- Site 1757
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ------S-N- R PIFPGKH--- Site 1757
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ------L-G- W PLYPGAL--- Site 1757
Schizosaccharomyces.pombe.CDK1 ------R-R- S PLFPGDS--- Site 1757
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ------L-G- F TLFQTHD--- Site 1757
Saccoglossus.kowalevskii.CDK1 ------T-R- R ALFPGDS--- Site 1757
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ------L-G- S LPWQGLK--- Site 1757
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ------C-H- K ILFPGRD--- Site 1757
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ------T-G- K ALFPGDS--- Site 1757
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ------T-C- S -FLND-T--- Site 1759
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ------T-R- K ALFPGDS--- Site 1757
Yarrowia.lipolytica.IME2 ------N-L- K PLFPGTN--- Site 1757
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ------G-L- Q PIFKGEE--- Site 1758
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ------T-R- K ALFPGDS--- Site 1757
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ------S-RR F PIFQSMD--- Site 1758
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ------L-G- Q PLFPGES--- Site 1757
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ------L-G- H PLFPGES--- Site 1757
Species Residue at Site 2625
in 'msaprobs'
muscle

The residue for every species at site 2625 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ------T-G- E PLFAGSS--- Site 1757
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ------G-R- R ILFQAQS--- Site 1758
Scheffersomyces.stipitis.SKY1 ------T-G- D YLFDPRDGKT Site 1757
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ------NAG- R PLFPGND--- Site 1757

Generated by PhyloBot at 15:47, October 23rd 2019
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