cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 26 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 26 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 26 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 26 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 26
in 'msaprobs'
muscle

The residue for every species at site 26 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---M------ K ---------- Site 567
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---M------ S ---------- Site 298
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---M------ E ---------- Site 551
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---M------ E ---------- Site 600
Candida.guilliermondii.IME2 ---M------ V ---------- Site 542
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---M------ D ---------- Site 603
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---M------ S ---------- Site 585
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---M------ D ---------- Site 592
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---M------ S ---------- Site 545
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---M------ D ---------- Site 592
Schizosaccharomyces.octosporus.b.IME2 ---M------ S ---------- Site 595
Candida.albicans.MAPK3..Extracellular.signal.regul ---M------ N ---------- Site 549
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---M------ H ---------- Site 322
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---M------ C ---------- Site 223
Suberites.domuncula.JNK..Stress.activated.protein. ---M------ S ---------- Site 596
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---M------ P ---------- Site 143
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---M------ R ---------- Site 285
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---M------ P ---------- Site 284
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---M------ P ---------- Site 335
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---M------ A ---------- Site 240
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 26
in 'msaprobs'
muscle

The residue for every species at site 26 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---M------ S ---------- Site 600
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---M------ P ---------- Site 565
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---M------ E ---------- Site 586
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---M------ D ---------- Site 603
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---M------ D ---------- Site 603
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---M------ S ---------- Site 586
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---M------ N ---------- Site 284
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---M------ G ---------- Site 244
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---M------ S ---------- Site 541
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---M------ S ---------- Site 541
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---M------ S ---------- Site 593
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---M------ S ---------- Site 294
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---M------ E ---------- Site 337
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---M------ - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---M------ S ---------- Site 592
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---M------ P NSERHGGKKD Site 4
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---M------ S ---------- Site 588
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---M------ S ---------- Site 592
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---M------ D ---------- Site 592
Species Residue at Site 26
in 'msaprobs'
muscle

The residue for every species at site 26 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---M------ E ---------- Site 603
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---M------ I ---------- Site 321
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---M------ I ---------- Site 316
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---M------ S ---------- Site 282
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---M------ A ---------- Site 236
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---M------ G ---------- Site 204
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---M------ K ---------- Site 599
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---M------ P ---------- Site 284
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---M------ G ---------- Site 192
Naegleria.gruberi.LF4 ---M------ T ---------- Site 326
Saccharomyces.bayanus.IME2 ---M------ V ---------- Site 585
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---M------ P ---------- Site 565
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---M------ T ---------- Site 593
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---M------ D ---------- Site 152
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---M------ A ---------- Site 318
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---M------ L ---------- Site 234
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---M------ K ---------- Site 599
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---M------ C ---------- Site 599
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---M------ D ---------- Site 4
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---M------ Q ---------- Site 226
Aspergillus.nidulans.IME2 ---M------ T ---------- Site 590
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---M------ E ---------- Site 549
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---M------ V ---------- Site 218
Species Residue at Site 26
in 'msaprobs'
muscle

The residue for every species at site 26 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---M------ S ---------- Site 541
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---M------ T ---------- Site 548
Penicillium.marneffei.IME2 ---M------ A ---------- Site 594
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---M------ S ---------- Site 593
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---M------ A ---------- Site 596
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---M------ S ---------- Site 270
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---M------ A ---------- Site 2
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---M------ P ----NSERHG Site 5
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---M------ N ---------- Site 562
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---M------ A ---------- Site 568
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---M------ S ---------- Site 541
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---M------ S ---------- Site 592
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---M------ R ---------- Site 285
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---M------ E ---------- Site 553
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---M------ D ---------- Site 592
Candida.parapsilosis.IME2 ---M------ P ---------- Site 586
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---M------ - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---M------ S ---------- Site 300
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---M------ S ---------- Site 592
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---M------ S ---------- Site 566
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---M------ R ---------- Site 285
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---M------ A ---------- Site 596
Species Residue at Site 26
in 'msaprobs'
muscle

The residue for every species at site 26 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---M------ D ---------- Site 281
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---M------ S ---------- Site 566
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---M------ S ---------- Site 585
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---M------ S ---------- Site 593
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---M------ A ---------- Site 318
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---M------ P ---------- Site 567
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---E------ - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---M------ S ---------- Site 550
Candida.orthopsilosis.IME2 ---M------ S ---------- Site 586
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---M------ A ---------- Site 600
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---M------ A ---------- Site 592
Debaryomyces.hansenii.IME2 ---M------ M ---------- Site 562
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---M------ S ---------- Site 546
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---M------ G ---------- Site 555
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---M------ P ---------- Site 597
Caenorhabditis.briggsae.CDK1 ---M------ T ---------- Site 592
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---M------ T ---------- Site 581
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---M------ G ---------- Site 251
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---M------ D ---------- Site 599
Monosiga.brevicollis.CDK1 ---M------ A ---------- Site 605
Saccharomyces.cerevisiae.SKY1 ---M------ G ---------- Site 274
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---M------ A ---------- Site 601
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---M------ S ---------- Site 545
Species Residue at Site 26
in 'msaprobs'
muscle

The residue for every species at site 26 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---M------ E ---------- Site 722
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---M------ C ---------- Site 599
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---M------ R ---------- Site 605
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---M------ K ---------- Site 599
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---M------ E ---------- Site 282
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---M------ E ---------- Site 599
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---M------ G ---------- Site 570
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---M------ S ---------- Site 592
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---M------ S ---------- Site 593
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---M------ S ---------- Site 584
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---M------ A ---------- Site 547
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---M------ S ---------- Site 541
Saccharomyces.cerevisiae.CDK1 ---M------ S ---------- Site 604
Lodderomyces.elongisporus.IME2 ---M------ S ---------- Site 585
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---M------ S ---------- Site 593
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---M------ P ---------- Site 281
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---M------ K ---------- Site 599
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---M------ K ---------- Site 334
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---M------ A ---------- Site 587
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---M------ R ---------- Site 285
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - ----------  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---M------ S ---------- Site 300
Species Residue at Site 26
in 'msaprobs'
muscle

The residue for every species at site 26 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---M------ D ---------- Site 594
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---M------ - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---M------ A ---------- Site 585
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---M------ E ---------- Site 594
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---M------ E ---------- Site 99
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---M------ S ---------- Site 543
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---M------ L ---------- Site 589
Aspergillus.fumigatus.IME2 ---M------ T ---------- Site 588
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---M------ G ---------- Site 592
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---M------ N ---------- Site 593
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---M------ P ---------- Site 257
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---M------ A ---------- Site 232
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---M------ A ---------- Site 582
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---M------ K ---------- Site 254
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---M------ A ---------- Site 568
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---M------ T ---------- Site 594
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---E------ M ---------- Site 591
Candida.glabrata.IME2 ---M------ F ---------- Site 548
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---M------ K ---------- Site 587
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---M------ N ---------- Site 593
Species Residue at Site 26
in 'msaprobs'
muscle

The residue for every species at site 26 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---M------ A ---------- Site 601
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---M------ A ---------- Site 595
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---M------ N ---------- Site 305
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---M------ P ---------- Site 287
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---M------ N ---------- Site 567
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---M------ A ---------- Site 596
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---M------ N ---------- Site 562
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---A------ - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---M------ P ---------- Site 143
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---M------ H ---------- Site 285
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---M------ A ---------- Site 552
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---M------ S ---------- Site 594
Lachancea.thermotolerans.SKY1 ---M------ G ---------- Site 304
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---M------ A ---------- Site 597
Dictyostelium.discoideum.CDK1 ---M------ E ---------- Site 602
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---M------ S ---------- Site 591
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U LIGM------ A ---------- Site 240
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---M------ S ---------- Site 566
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 26
in 'msaprobs'
muscle

The residue for every species at site 26 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---M------ E ---------- Site 604
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---M------ G ---------- Site 335
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---M------ S ---------- Site 599
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---M------ H ---------- Site 285
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---M------ S ---------- Site 543
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---M------ A ---------- Site 566
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---M------ M ---------- Site 292
Encephalitozoon.cuniculi.CDK1 ---M------ - ----------  
Saccharomyces.kluyveri.IME2 ---M------ V ---------- Site 336
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---M------ R ---------- Site 285
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---M------ A ---------- Site 589
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---M------ G ---------- Site 335
Cryptococcus.neoformans.IME2 ---M------ T ---------- Site 228
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---M------ S ---------- Site 601
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---M------ E ---------- Site 337
Candida.lusitaniae.IME2 ---M------ R ---------- Site 547
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---M------ A ---------- Site 240
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---M------ D ---------- Site 589
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---M------ V ---------- Site 724
Species Residue at Site 26
in 'msaprobs'
muscle

The residue for every species at site 26 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---M------ S ---------- Site 566
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---M------ A ---------- Site 552
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 ---M------ L ---------- Site 561
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---M------ R ---------- Site 271
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---M------ A ---------- Site 600
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---M------ C ---------- Site 293
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---M------ A ---------- Site 549
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---M------ T ---------- Site 585
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---M------ A ---------- Site 600
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---M------ A ---------- Site 597
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---M------ A ---------- Site 232
Acyrthosiphon.pisum.CDK1 ---M------ Q ---------- Site 587
Candida.tropicalis.CDK1 ---M------ M ---------- Site 584
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---M------ D ---------- Site 592
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---M------ S ---------- Site 551
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---M------ T ---------- Site 566
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---M------ D ---------- Site 281
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---M------ I ---------- Site 316
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---M------ K ---------- Site 254
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---R----AM N ---------- Site 593
Candida.albicans.SSN3..Serine.threonine.protein.ki ---M------ S ---------- Site 322
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---M------ G ---------- Site 587
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---M------ S ---------- Site 543
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---M------ E ---------- Site 595
Species Residue at Site 26
in 'msaprobs'
muscle

The residue for every species at site 26 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---M------ K ---------- Site 563
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---M------ S ---------- Site 566
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---M------ A ---------- Site 235
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---M------ G ---------- Site 192
Candida.dubliniensis.IME2 ---M------ S ---------- Site 585
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---M------ S ---------- Site 592
Aspergillus.niger.IME2 ---M------ T ---------- Site 588
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---M------ S ---------- Site 593
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---M------ C ---------- Site 293
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---M------ S ---------- Site 566
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---M------ N ---------- Site 180
Schizosaccharomyces.japonicus.IME2 ---M------ P ---------- Site 586
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---M------ E ---------- Site 311
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---M------ S ---------- Site 585
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---M------ S ---------- Site 560
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---M------ N ---------- Site 562
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---M------ S ---------- Site 591
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---M------ P ---------- Site 556
Kluyveromyces.waltii.IME2 ---M------ G ---------- Site 563
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 ---M------ V ---------- Site 585
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 26
in 'msaprobs'
muscle

The residue for every species at site 26 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---M------ E ---------- Site 601
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---M------ P ---------- Site 565
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---M------ A ---------- Site 597
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---M------ E ---------- Site 599
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---M------ T ---------- Site 277
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---M------ S ---------- Site 591
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---M------ N ---------- Site 592
Candida.albicans.IME2 ---M------ S ---------- Site 585
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---M------ S ---------- Site 603
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---M------ S ---------- Site 554
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---M------ S ---------- Site 594
Kluyveromyces.lactis.IME2 ---M------ P ---------- Site 566
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---M------ A ---------- Site 552
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---M------ S ---------- Site 541
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---M------ S ---------- Site 594
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---M------ D ---------- Site 592
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---M------ S ---------- Site 594
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U GSPM------ E ---------- Site 604
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---M------ V ---------- Site 107
Neurospora.crassa.IME2 ---M------ T ---------- Site 586
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---M------ T ---------- Site 93
Species Residue at Site 26
in 'msaprobs'
muscle

The residue for every species at site 26 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---M------ - ----------  
Hydra.magnipapillata.CDK1 ---MAVPNDM K ---------- Site 604
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---M------ A ---------- Site 560
Ashbya.gossypii.IME2 ---M------ K ---------- Site 561
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---M------ E ---------- Site 103
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---M------ G ---------- Site 237
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---M------ N ---------- Site 560
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---M------ N ---------- Site 599
Schizosaccharomyces.pombe.b.IME2 ---M------ S ---------- Site 596
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---M------ A ---------- Site 591
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---M------ A ---------- Site 236
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---M------ P ---------- Site 248
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---M------ E ---------- Site 603
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---M------ S ---------- Site 592
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 ---M------ P ---------- Site 588
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---M------ Y ---------- Site 549
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---M------ D ---------- Site 587
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---M------ A ---------- Site 564
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---M------ N ---------- Site 567
Species Residue at Site 26
in 'msaprobs'
muscle

The residue for every species at site 26 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---M------ N ---------- Site 137
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---M------ S ---------- Site 294
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 05:14, December 6th 2019
Questions/Comments? help@phylobot.com