cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 2569 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2569 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2569 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 2569 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 2569
in 'msaprobs'
muscle

The residue for every species at site 2569 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 VDIYAAGCMA F EIA------- Site 1703
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD VDIWSAACMA F ELA------- Site 1703
Danio.rerio.CDK1 VDIWSLGCIF A EMI------- Site 1703
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge IDVWSVGCIF M ELM------- Site 1703
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d IDMWSAGCIF A ELA------- Site 1703
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK VDSWSAGCIF A EIA------- Site 1703
Candida.guilliermondii.IME2 VDIWAFGTVA A EVA------- Site 1703
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ DDLESLGYVL M YFL------- Site 1703
Chlamydomonas.reinhardtii.LF4 MDMWGVGCVF F EIV------- Site 1703
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g IDVWSAACVI A ELF------- Site 1703
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 DDMESLGYVM M YFN------- Site 1703
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 DDMEAMGHVF F YFL------- Site 1703
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho IDIWAIGCIF A ELL------- Site 1703
Schizosaccharomyces.octosporus.b.IME2 VDMYAFGCIT F EVF------- Site 1703
Candida.albicans.MAPK3..Extracellular.signal.regul IDVWSVGCIL A EML------- Site 1703
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. LDMWSLGCMF A GMIF------ Site 1703
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 DDLESLGYVL M YFN------- Site 1703
Suberites.domuncula.JNK..Stress.activated.protein. VDIWSVGCIF A EMI------- Site 1703
Homo.sapiens.CLK3..Dual.specificity.protein.kinase CDVWSIGCIL F EYY------- Site 1703
Aedes.aegypti.CDK1 VDIWSIGCIF A EMT------- Site 1703
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci CDVWSIGCIL I EYY------- Site 1703
Homo.sapiens.CLK2..Dual.specificity.protein.kinase CDVWSIGCII F EYY------- Site 1703
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos IDMWSLGCIT A ELY------- Site 1703
Homo.sapiens.HIPK1..Homeodomain.interacting.protei IDMWSLGCVI A ELF------- Site 1703
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar VDVWAIGCVF A ELL------- Site 1703
Species Residue at Site 2569
in 'msaprobs'
muscle

The residue for every species at site 2569 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 VDVWSAACII A EMI------- Site 1703
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. LDMWSLGCML A SMIF------ Site 1703
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM IDIWSVGCIL A EML------- Site 1703
Strongylocentrotus.purpuratus.CDK1 VDIWSLGCIF V EMI------- Site 1703
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca DDLESIGYVL L YFL------- Site 1703
Drosophila.melanogaster.CDK1 VDIWSIGCIF A EMA------- Site 1703
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 DDLEQIGIVL M YFL------- Site 1703
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. DDLESLGYVL M YFN------- Site 1703
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH VDMWSFGCTA F ELV------- Site 1703
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d IDMWGVGCIH Y EMA------- Site 1703
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. LDMWGVGCIF T EMI------- Site 1703
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET VDMWSVGCIF G ELL------- Site 1703
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 VDVWAIGCLV T EMF------- Site 1703
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U VDIWSVGCIM G EMV------- Site 1703
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. VDIWSVGCIM A EML------- Site 1703
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo IDIWSVGCIF A ELL------- Site 1703
Bombus.terrestris.CDK1 VDVWSLGCIF A EMA------- Site 1703
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ADIWSTACMA F ELA------- Site 1703
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar VDVWAIGCLV T EML------- Site 1703
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. VDIWSVGCIL G EMI------- Site 1703
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d IDVWSCGCIL G ELF------- Site 1703
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. MDLWSAGCVF Y EIA------- Site 1703
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. VDIWSVGCIF A EML------- Site 1703
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G VDIWSVGCIF A EMM------- Site 1703
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 DDMESLGYVM M YFN------- Site 1703
Species Residue at Site 2569
in 'msaprobs'
muscle

The residue for every species at site 2569 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 DDLESLGYIL M YFL------- Site 1703
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO IDMWSLGCVV A ELF------- Site 1703
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C LDMWSLGCMF A GMIF------ Site 1703
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl IDVWSVGCIF A ELL------- Site 1703
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 VDVWAIGCVF A ELL------- Site 1703
Homo.sapiens.HIPK3..Homeodomain.interacting.protei IDMWSLGCVI A ELF------- Site 1703
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O VDMWSVGCIF G ELL------- Site 1703
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d VDMWSVGCIL G ELS------- Site 1703
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci CDVWSIGCII F EYY------- Site 1703
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O VDMWSVGCIF G ELL------- Site 1703
Naegleria.gruberi.LF4 MDMWSIGCVF Y ELI------- Site 1703
Saccharomyces.bayanus.IME2 LDIWAFGCVA V EVT------- Site 1703
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. LDMWSLGCML A SMIF------ Site 1703
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a VDIWSVGCIM A EML------- Site 1703
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki VDIWSIGCIF A ELM------- Site 1703
Dictyostelium.discoideum.DYRK1..Probable.serine.th IDMWSLGCIL V EMH------- Site 1703
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos IDMWSLGCIL V EMH------- Site 1703
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos IDMWSLGCIL A ELL------- Site 1703
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d VDMWSVGCIL G ELS------- Site 1703
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a VDMWSLGCIL G EML------- Site 1703
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific GDVWSLGCIL Y CMT------- Site 1703
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos IDMWSLGCIM A ELY------- Site 1703
Aspergillus.nidulans.IME2 VDMWAVGAMA V EIA------- Site 1703
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi IDMWSAGVIF L SLL------- Site 1703
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se VDIWSVGCIF A ELL------- Site 1703
Species Residue at Site 2569
in 'msaprobs'
muscle

The residue for every species at site 2569 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. IDVWAVGSIM A ELY------- Site 1703
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep VDIWSLGCIF A EMV------- Site 1703
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. VDIWSVGCIM G EMV------- Site 1703
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. IDVWSVGCVL A ELL------- Site 1703
Penicillium.marneffei.IME2 VDIWAVGAMA V EIA------- Site 1703
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen VDIWSVGCIM A ELL------- Site 1703
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a IDMWAAGCIL A EML------- Site 1703
Drosophila.melanogaster.MAK IDLWAMGCIM A ELY------- Site 1703
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH IDTWSVGCSL Y ELY------- Site 1703
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr IDMWSVGCTL Y ELY------- Site 1703
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de IDVWSCGCIL G ELF------- Site 1703
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep VDIWAIGCIF A ELI------- Site 1703
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d IDMWAVGCIL A ELL------- Site 1703
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin VDIWSVGCIM G EMV------- Site 1703
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a VDIWSVGCIM G ELV------- Site 1703
Homo.sapiens.CLK1..Dual.specificity.protein.kinase CDVWSIGCIL I EYY------- Site 1703
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis IDMWSAGVIF L SLL------- Site 1703
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 DDMESLGYVM M YFN------- Site 1703
Candida.parapsilosis.IME2 IDIWAYGAVA A EII------- Site 1703
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p IDVWAIGCIY G EML------- Site 1703
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen IDVWSAGCVL A ELL------- Site 1703
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. VDIWSVGCIM G ELV------- Site 1703
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki LDMWSLGCML A SMIF------ Site 1703
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U TLPILIGCIL I EYY------- Site 1703
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a IDMWAAGCIL A EML------- Site 1703
Species Residue at Site 2569
in 'msaprobs'
muscle

The residue for every species at site 2569 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d IDMWGVGCIF Y EMA------- Site 1703
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. LDMWSLGCML A SMIF------ Site 1703
Yarrowia.lipolytica.SSN3..Serine.threonine.protein VDLWAVGCIF A ELL------- Site 1703
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. VDIWSVGCIM G EML------- Site 1703
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos IDMWSLGCIL V EMH------- Site 1703
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE LDMWSLGCML A SMIF------ Site 1703
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH IDVWSQGCVG A ELL------- Site 1703
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD IDVWSLGCVL A ELL------- Site 1703
Candida.orthopsilosis.IME2 IDIWAYGTVA A EIV------- Site 1703
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot VDMWAVGCIL A ELL------- Site 1703
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str VDVWSVGCIF G ELI------- Site 1703
Debaryomyces.hansenii.IME2 VDMWAFGTIA V EVA------- Site 1703
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati IDVWSVGCVL A ELL------- Site 1703
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin IDLWAVGCIF A ELI------- Site 1703
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE LDMWSLGCIF S EIA------- Site 1703
Caenorhabditis.briggsae.CDK1 VDMWSIGCIF A EMA------- Site 1703
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO LDMWSLGCML A SMIF------ Site 1703
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de VDLWAVGCIM G ELL------- Site 1703
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos IDIWSFGCIL A ELL------- Site 1703
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. VDLWSVGCIF A EMF------- Site 1703
Monosiga.brevicollis.CDK1 VDVWSIGTIF A EMA------- Site 1703
Saccharomyces.cerevisiae.SKY1 ADIWSTACLI F ELI------- Site 1703
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP IDVWSVGCIL A EML------- Site 1703
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U VDVWAVGCVA V EIQ------- Site 1703
Drosophila.melanogaster.GSK3..Protein.kinase.shagg IDVWSAGCVL A ELL------- Site 1703
Species Residue at Site 2569
in 'msaprobs'
muscle

The residue for every species at site 2569 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas DDIEALGYVL M YFL------- Site 1703
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. VDMWSLGCIL G EML------- Site 1703
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d VDIWAIGCLV I EML------- Site 1703
Dictyostelium.discoideum.CDK10..Probable.cyclin.de VDLWSIGSIF G ELL------- Site 1703
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d VDMWSVGCIL G ELS------- Site 1703
Ajellomyces.capsulatus.CDK1 VDMWSVGAIF A EMC------- Site 1703
Dictystelium.discoideum.MAPK3..Extracellular.signa IDIWSVGCIF A ELL------- Site 1703
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep VDLWSVGCIF A EMF------- Site 1703
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep IDMWAVGCIL A ELL------- Site 1703
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac VDLWSVGCIM G EMV------- Site 1703
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. VDIWSVGCIM A EML------- Site 1703
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO VDIWSAACII F EMF------- Site 1703
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri IDIWSVGCIF A ELL------- Site 1703
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha VDMWSVGCIM G EMV------- Site 1703
Saccharomyces.cerevisiae.CDK1 VDTWSIGCIF A EMC------- Site 1703
Lodderomyces.elongisporus.IME2 IDIWAFGAVA A EVI------- Site 1703
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen VDIWSVGCIM A ELL------- Site 1703
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un CDVWSVGCII F EYY------- Site 1703
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar VDMWSVGCIL G ELS------- Site 1703
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. IDIWSAGCVM A ELL------- Site 1703
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D IDMWGLGCIL G EMI------- Site 1703
Homo.sapiens.CLK4..Dual.specificity.protein.kinase CDVWSIGCIL I EYY------- Site 1703
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U IDMWSLGCVI A ELF------- Site 1703
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d VDVWAIGCVF A ELL------- Site 1703
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen IDVWSAGCVL A ELL------- Site 1703
Species Residue at Site 2569
in 'msaprobs'
muscle

The residue for every species at site 2569 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 VDMWSIGCIF A EMA------- Site 1703
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep VDMWSVGCIF A EMF------- Site 1703
Cryptococcus.neoformans.SSN3..Serine.threonine.pro VDIWAVGCIY A ELL------- Site 1703
Salmo.salar.CDK1 VDIWSLGCIF A EMI------- Site 1703
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d VDMWAVGCIL A ELL------- Site 1703
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d VDLWSVGCIM G ELL------- Site 1703
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi SDVWSLGCIL Y YMT------- Site 1703
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen IDVWSAGCVL A ELL------- Site 1703
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable SDIWSLGCII L DMT------- Site 1703
Aspergillus.fumigatus.IME2 VDMWAVGAMA V EIA------- Site 1703
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan IDIWAIGCIF A ELL------- Site 1703
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha CDVWSIGCIL F EYY------- Site 1703
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha VDIWSIGCIM A EML------- Site 1703
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S VDIWSVGCIF A ELL------- Site 1703
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma IDMWSLGCVI A ELF------- Site 1703
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina IDIWSVGCIL A EML------- Site 1703
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d IDMWGVGCIF F EMA------- Site 1703
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. IDMWAVGCIL A ELL------- Site 1703
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de VDVWAVGCVF A ELL------- Site 1703
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S VDIWSVGCIM G EMI------- Site 1703
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. VDIWSVGCIM A EMI------- Site 1703
Candida.glabrata.IME2 LDIWAFGCVA M EVT------- Site 1703
Homo.sapiens.MAK..Serine.threonine.protein.kinase. IDVWAVGSIM A ELY------- Site 1703
Schizosaccharomyces.pombe.IME2 VDIYAAGCMA F EIA------- Site 1703
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P IDVWSVGCIL A EML------- Site 1703
Species Residue at Site 2569
in 'msaprobs'
muscle

The residue for every species at site 2569 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl IDMWSAGCIF A ELA------- Site 1703
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom VDVWSLGCVM A ELH------- Site 1703
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. DDMESLGYVL M YFN------- Site 1703
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d IDMWGVGCIL Y EMA------- Site 1703
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d VDVWAVGCVF A ELL------- Site 1703
Branchiostoma.floridae.CDK1 VDVWSIGCIF A EMI------- Site 1703
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara CDVWSIGCII F EYY------- Site 1703
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH IDIWSTGCVM A ELM------- Site 1703
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD IDIWAVGCLL P EML------- Site 1703
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR IDVWSAGTVI A ELL------- Site 1703
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. IDMWAAGCIL A ---------- Site 1703
Homo.sapiens.ICK..Serine.threonine.protein.kinase. IDVWAVGCIM A EVY------- Site 1703
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci CDVWSIGCIL F EYY------- Site 1703
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos IDMWSLGCIL V EMH------- Site 1703
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep VDIWSLGCIF A EMHLVCTQHH Site 1703
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act IDLWSVGCIF G EML------- Site 1703
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. VDIWSVGCIM A ELL------- Site 1703
Lachancea.thermotolerans.SKY1 ADIWSAACLI F ELL------- Site 1703
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a IDMWAAGCIF A EML------- Site 1703
Dictyostelium.discoideum.CDK1 VDMWSVGCIF G EML------- Site 1703
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. VDIWSVGCIM A EMI------- Site 1703
Xenopus.tropicalis.IME2 VDIWSLGCIF A EMI------- Site 1703
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U IDMWSLGCVI A ELF------- Site 1703
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. LDMWSLGCML A SMIF------ Site 1703
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d VDIWSLGCIF A EMI------- Site 1703
Species Residue at Site 2569
in 'msaprobs'
muscle

The residue for every species at site 2569 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara VDIWSIGCIF A EMV------- Site 1703
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. LDIWGAGCIF I EMF------- Site 1703
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD VDMWSIGCIL G ELL------- Site 1703
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos IDMWSLGCIL V EMH------- Site 1703
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen IDVWSAGCVL A ELL------- Site 1703
Drosophila.melanogaster.GSK3H..Putative.glycogen.s IDMWSAGCVM S ELL------- Site 1703
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD MDLWSAGCVL S ELL------- Site 1703
Encephalitozoon.cuniculi.CDK1 VDVWSAACIM A EVV------- Site 1703
Saccharomyces.kluyveri.IME2 VDVWAFGCVA L EVA------- Site 1703
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci CDVWSIGCIL I EYY------- Site 1703
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a IDIWSVGCIL A EML------- Site 1703
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. LDIWGAGCIF I EMF------- Site 1703
Cryptococcus.neoformans.IME2 VDMWALGTIL A EML------- Site 1703
Homo.sapiens.HIPK4..Homeodomain.interacting.protei VDVWSLGCVM A ELH------- Site 1703
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ADIWSTACMA F ELA------- Site 1703
Candida.lusitaniae.IME2 IDIWAFASVA V ELV------- Site 1703
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom IDMWSLGCVI A ELF------- Site 1703
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A IDIWAIGCIF A ELL------- Site 1703
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep VDLWAVGCIF G ELL------- Site 1703
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. VDVWAIGCVF A ELI------- Site 1703
Gallus.gallus.CDK2 VDIWSLGCIF A EMV------- Site 1703
Emericella.nidulans.CDK1 VDMWSCGAIF A EMC------- Site 1703
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. MDLWSAGCVF Y EIA------- Site 1703
Homo.sapiens.CDK1 VDIWSIGTIF A ELA------- Site 1703
Candida.albicans.CDK1 VDMWSVGCIF A EMC------- Site 1703
Species Residue at Site 2569
in 'msaprobs'
muscle

The residue for every species at site 2569 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca LDMWSLGCML A SMIF------ Site 1703
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a IDLWSVGCIF G EML------- Site 1703
Mus.musculus.ICK..Serine.threonine.protein.kinase. IDIWAVGCIM A EVY------- Site 1703
Saccharomyces.castelli.IME2 LDIWAFGCVA V EAT------- Site 1703
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec CDVWSLGCIL I EYY------- Site 1703
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep VDMWAVGCIL A ELL------- Site 1703
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. LDMWGVGCIF V EMI------- Site 1703
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly IDIWSLGCVM A ELL------- Site 1703
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS IDIWSVGVIL L SLL------- Site 1703
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli VDMWAVGSIL A ELL------- Site 1703
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho IDLWGAGCIM A EMW------- Site 1703
Homo.sapiens.HIPK2..Homeodomain.interacting.protei IDMWSLGCVI A ELF------- Site 1703
Acyrthosiphon.pisum.CDK1 VDLWSLGCIF T EMM------- Site 1703
Candida.tropicalis.CDK1 IDIWAFGAVA V EIA------- Site 1703
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin IDIWAIGCIF A ELL------- Site 1703
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G IDIWSAGCVF A EVL------- Site 1703
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR LDMWSLGCML A SMIF------ Site 1703
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de IDMWGVGCIF Y EMA------- Site 1703
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 LDMWSLGCMF A GMIF------ Site 1703
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d IDMWGVGCIF F EMA------- Site 1703
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA VDIWSIGCIM A EML------- Site 1703
Candida.albicans.SSN3..Serine.threonine.protein.ki VDLWAVGCIL A ELL------- Site 1703
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF MDMWGVGCVF F EIV------- Site 1703
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA IDVWSAGCVL A ELL------- Site 1703
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara VDIWSVGCIM G EMF------- Site 1703
Species Residue at Site 2569
in 'msaprobs'
muscle

The residue for every species at site 2569 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de IDMWSVGCIM A EMY------- Site 1703
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei LDMWSLGCML A SMIF------ Site 1703
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U IDMWSLGCVI A ELF------- Site 1703
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d VDMWSVGCIF G ELL------- Site 1703
Candida.dubliniensis.IME2 IDIWAFGAVA V ETA------- Site 1703
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a VDIWSVGCIM A EMV------- Site 1703
Aspergillus.niger.IME2 VDMWAVGAMA V EIA------- Site 1703
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge VDIWSVGCIM A ELL------- Site 1703
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d VDIWALGCMI I EMA------- Site 1703
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. LDMWGVGCIF V EMI------- Site 1703
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein LDMWRLGCML A SMIF------ Site 1703
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty IDMWSLGCIL V EMH------- Site 1703
Schizosaccharomyces.japonicus.IME2 VDVYAVGCMA F EIA------- Site 1703
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. VDVWSIGCIF G ELI------- Site 1703
Gallus.gallus.CDK1 VDIWSIGTIF A ELA------- Site 1703
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep IDMWSAGCIF A ELA------- Site 1703
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P IDVWSTGCVM A ELM------- Site 1703
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE VDMWSIGCII Y EIY------- Site 1703
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. IDVWSAGTVM A ELL------- Site 1703
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. VDIWSVGCIM A EMI------- Site 1703
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ LDLWSVGCML A AIVF------ Site 1703
Kluyveromyces.waltii.IME2 LDIWAFGCVV V EVA------- Site 1703
Debaryomyces.hansenii.SKY1 ADLWSFACLI F ELL------- Site 1703
Saccharomyces.cerevisiae.IME2 LDIWAFGCVA V EVT------- Site 1703
Schizosaccharomyces.japonicus.b.IME2 VDMYAFGCIA Y ELA------- Site 1703
Species Residue at Site 2569
in 'msaprobs'
muscle

The residue for every species at site 2569 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un VDLWSVGCIF A EMF------- Site 1703
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein LDMWSLGCML A SMIF------ Site 1703
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a IDMWAAGCIF A EML------- Site 1703
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep VDLWSVGCIF A EMF------- Site 1703
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST VDVWSSACVI A ELL------- Site 1703
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk VDIWSVGCIM A EMY------- Site 1703
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de VDIWALGCMI I EMA------- Site 1703
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act VDVWSIGCIM A EMV------- Site 1703
Candida.albicans.IME2 IDIWAFGAVA V ETA------- Site 1703
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d VDVWSAGCIF A EMF------- Site 1703
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k IDIWSVGCIF A EII------- Site 1703
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. VDIWSVGCIM A ELL------- Site 1703
Kluyveromyces.lactis.IME2 LDIWAYGCVV V ELA------- Site 1703
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina IDLWSVGCIF G EML------- Site 1703
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. VDIWSVGCIM G EMV------- Site 1703
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. VDIWSVGCIM A ELL------- Site 1703
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 DDMESLGYVM M YFN------- Site 1703
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. VDIWSVGCIM A ELL------- Site 1703
Amphimedon.queenslandica.CDK1 VDIWSIGCIF A EMV------- Site 1703
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d VDIWAIGCVF A ELL------- Site 1703
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U VDIWSIGCIF A EMM------- Site 1703
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME IDVWSVGCIF A EFL------- Site 1703
Neurospora.crassa.IME2 VDIWAIGAMA V EIA------- Site 1703
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME IDMWSAGCIL A ELA------- Site 1703
Dictyostelium.discoideum.DYRK2..Probable.serine.th IDIWSLGCIL V EIF------- Site 1703
Species Residue at Site 2569
in 'msaprobs'
muscle

The residue for every species at site 2569 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep VDMWSVGCIF A EMF------- Site 1703
Hydra.magnipapillata.CDK1 VDIWSIGCIF V EMM------- Site 1703
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar IDMWAVGCIL A ELL------- Site 1703
Ashbya.gossypii.IME2 LDIWAFGCVA V EVA------- Site 1703
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi SDVWSLGCIL Y YMT------- Site 1703
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos IDIWSFGCIL A ELL------- Site 1703
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p IDIWSSGCVM A ELL------- Site 1703
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace VDMWSIGCIL A EML------- Site 1703
Schizosaccharomyces.pombe.b.IME2 VDLYAFGCIV F EIY------- Site 1703
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a IDIWSVGCIL A EML------- Site 1703
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom IDMWSLGCVI A ELF------- Site 1703
Schizosaccharomyces.pombe.CDK1 VDIWSVGCIF A EMI------- Site 1703
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch CDVWSIGCIL F EYY------- Site 1703
Saccoglossus.kowalevskii.CDK1 ---------- - -EI-------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas DDLESLGYVL M YFN------- Site 1703
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac VDLWSVGCIM G EMV------- Site 1703
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep VDI-SIGCIF A EMV------- Site 1703
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable SDIWSLGCII L DMA------- Site 1703
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep VDIWSIGCIF A EMV------- Site 1703
Yarrowia.lipolytica.IME2 VDIWAFGAMA A EVA------- Site 1703
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil VDLWSVGCIF A ELI------- Site 1703
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli VDIWSLGCIF A EMI------- Site 1703
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K IDIWSVGVIL L SFI------- Site 1703
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly IDVWSTGCVM A ELM------- Site 1703
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk IDIWSTGCVM A ELM------- Site 1703
Species Residue at Site 2569
in 'msaprobs'
muscle

The residue for every species at site 2569 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro IDMWSLGCIL V EMH------- Site 1703
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo IDIWSVGCIF A ELL------- Site 1703
Scheffersomyces.stipitis.SKY1 SDLWSFACLV F ELL------- Site 1703
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep IDMWSAGCIF A ELA------- Site 1703

Generated by PhyloBot at 02:22, October 16th 2019
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