cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 2568 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2568 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2568 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 2568 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 2568
in 'msaprobs'
muscle

The residue for every species at site 2568 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 PVDIYAAGCM A FEIA------ Site 1702
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD PVDIWSAACM A FELA------ Site 1702
Danio.rerio.CDK1 AVDIWSLGCI F AEMI------ Site 1702
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge AIDVWSVGCI F MELM------ Site 1702
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d SIDMWSAGCI F AELA------ Site 1702
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK TVDSWSAGCI F AEIA------ Site 1702
Candida.guilliermondii.IME2 PVDIWAFGTV A AEVA------ Site 1702
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ RDDLESLGYV L MYFL------ Site 1702
Chlamydomonas.reinhardtii.LF4 KMDMWGVGCV F FEIV------ Site 1702
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g KIDVWSAACV I AELF------ Site 1702
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 RDDMESLGYV M MYFN------ Site 1702
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 RDDMEAMGHV F FYFL------ Site 1702
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho AIDIWAIGCI F AELL------ Site 1702
Schizosaccharomyces.octosporus.b.IME2 AVDMYAFGCI T FEVF------ Site 1702
Candida.albicans.MAPK3..Extracellular.signal.regul AIDVWSVGCI L AEML------ Site 1702
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. SLDMWSLGCM F AGMIF----- Site 1702
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 RDDLESLGYV L MYFN------ Site 1702
Suberites.domuncula.JNK..Stress.activated.protein. NVDIWSVGCI F AEMI------ Site 1702
Homo.sapiens.CLK3..Dual.specificity.protein.kinase PCDVWSIGCI L FEYY------ Site 1702
Aedes.aegypti.CDK1 PVDIWSIGCI F AEMT------ Site 1702
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci PCDVWSIGCI L IEYY------ Site 1702
Homo.sapiens.CLK2..Dual.specificity.protein.kinase PCDVWSIGCI I FEYY------ Site 1702
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos AIDMWSLGCI T AELY------ Site 1702
Homo.sapiens.HIPK1..Homeodomain.interacting.protei AIDMWSLGCV I AELF------ Site 1702
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar PVDVWAIGCV F AELL------ Site 1702
Species Residue at Site 2568
in 'msaprobs'
muscle

The residue for every species at site 2568 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 SVDVWSAACI I AEMI------ Site 1702
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. SLDMWSLGCM L ASMIF----- Site 1702
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM SIDIWSVGCI L AEML------ Site 1702
Strongylocentrotus.purpuratus.CDK1 AVDIWSLGCI F VEMI------ Site 1702
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca RDDLESIGYV L LYFL------ Site 1702
Drosophila.melanogaster.CDK1 PVDIWSIGCI F AEMA------ Site 1702
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 RDDLEQIGIV L MYFL------ Site 1702
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. RDDLESLGYV L MYFN------ Site 1702
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH SVDMWSFGCT A FELV------ Site 1702
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d PIDMWGVGCI H YEMA------ Site 1702
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. SLDMWGVGCI F TEMI------ Site 1702
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET VVDMWSVGCI F GELL------ Site 1702
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 AVDVWAIGCL V TEMF------ Site 1702
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U NVDIWSVGCI M GEMV------ Site 1702
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. TVDIWSVGCI M AEML------ Site 1702
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo AIDIWSVGCI F AELL------ Site 1702
Bombus.terrestris.CDK1 AVDVWSLGCI F AEMA------ Site 1702
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 PADIWSTACM A FELA------ Site 1702
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar AVDVWAIGCL V TEML------ Site 1702
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. NVDIWSVGCI L GEMI------ Site 1702
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d AIDVWSCGCI L GELF------ Site 1702
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. KMDLWSAGCV F YEIA------ Site 1702
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. AVDIWSVGCI F AEML------ Site 1702
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G SVDIWSVGCI F AEMM------ Site 1702
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 RDDMESLGYV M MYFN------ Site 1702
Species Residue at Site 2568
in 'msaprobs'
muscle

The residue for every species at site 2568 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 RDDLESLGYI L MYFL------ Site 1702
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO AIDMWSLGCV V AELF------ Site 1702
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C SLDMWSLGCM F AGMIF----- Site 1702
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl AIDVWSVGCI F AELL------ Site 1702
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 PVDVWAIGCV F AELL------ Site 1702
Homo.sapiens.HIPK3..Homeodomain.interacting.protei AIDMWSLGCV I AELF------ Site 1702
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O AVDMWSVGCI F GELL------ Site 1702
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d AVDMWSVGCI L GELS------ Site 1702
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci PCDVWSIGCI I FEYY------ Site 1702
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O AVDMWSVGCI F GELL------ Site 1702
Naegleria.gruberi.LF4 KMDMWSIGCV F YELI------ Site 1702
Saccharomyces.bayanus.IME2 PLDIWAFGCV A VEVT------ Site 1702
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. SLDMWSLGCM L ASMIF----- Site 1702
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a TVDIWSVGCI M AEML------ Site 1702
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki SVDIWSIGCI F AELM------ Site 1702
Dictyostelium.discoideum.DYRK1..Probable.serine.th SIDMWSLGCI L VEMH------ Site 1702
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos AIDMWSLGCI L VEMH------ Site 1702
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos PIDMWSLGCI L AELL------ Site 1702
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d SVDMWSVGCI L GELS------ Site 1702
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a GVDMWSLGCI L GEML------ Site 1702
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific KGDVWSLGCI L YCMT------ Site 1702
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos AIDMWSLGCI M AELY------ Site 1702
Aspergillus.nidulans.IME2 PVDMWAVGAM A VEIA------ Site 1702
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi AIDMWSAGVI F LSLL------ Site 1702
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se AVDIWSVGCI F AELL------ Site 1702
Species Residue at Site 2568
in 'msaprobs'
muscle

The residue for every species at site 2568 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. PIDVWAVGSI M AELY------ Site 1702
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep AVDIWSLGCI F AEMV------ Site 1702
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. NVDIWSVGCI M GEMV------ Site 1702
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. AIDVWSVGCV L AELL------ Site 1702
Penicillium.marneffei.IME2 PVDIWAVGAM A VEIA------ Site 1702
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen TVDIWSVGCI M AELL------ Site 1702
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a AIDMWAAGCI L AEML------ Site 1702
Drosophila.melanogaster.MAK TIDLWAMGCI M AELY------ Site 1702
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH PIDTWSVGCS L YELY------ Site 1702
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr GIDMWSVGCT L YELY------ Site 1702
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de AIDVWSCGCI L GELF------ Site 1702
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep AVDIWAIGCI F AELI------ Site 1702
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d SIDMWAVGCI L AELL------ Site 1702
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin NVDIWSVGCI M GEMV------ Site 1702
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a NVDIWSVGCI M GELV------ Site 1702
Homo.sapiens.CLK1..Dual.specificity.protein.kinase PCDVWSIGCI L IEYY------ Site 1702
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis AIDMWSAGVI F LSLL------ Site 1702
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 RDDMESLGYV M MYFN------ Site 1702
Candida.parapsilosis.IME2 GIDIWAYGAV A AEII------ Site 1702
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p AIDVWAIGCI Y GEML------ Site 1702
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen SIDVWSAGCV L AELL------ Site 1702
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. NVDIWSVGCI M GELV------ Site 1702
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki SLDMWSLGCM L ASMIF----- Site 1702
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U GTLPILIGCI L IEYY------ Site 1702
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a AIDMWAAGCI L AEML------ Site 1702
Species Residue at Site 2568
in 'msaprobs'
muscle

The residue for every species at site 2568 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d QIDMWGVGCI F YEMA------ Site 1702
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. SLDMWSLGCM L ASMIF----- Site 1702
Yarrowia.lipolytica.SSN3..Serine.threonine.protein AVDLWAVGCI F AELL------ Site 1702
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. TVDIWSVGCI M GEML------ Site 1702
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos AIDMWSLGCI L VEMH------ Site 1702
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE SLDMWSLGCM L ASMIF----- Site 1702
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH AIDVWSQGCV G AELL------ Site 1702
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD TIDVWSLGCV L AELL------ Site 1702
Candida.orthopsilosis.IME2 EIDIWAYGTV A AEIV------ Site 1702
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot GVDMWAVGCI L AELL------ Site 1702
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str NVDVWSVGCI F GELI------ Site 1702
Debaryomyces.hansenii.IME2 PVDMWAFGTI A VEVA------ Site 1702
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati GIDVWSVGCV L AELL------ Site 1702
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin AIDLWAVGCI F AELI------ Site 1702
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE SLDMWSLGCI F SEIA------ Site 1702
Caenorhabditis.briggsae.CDK1 GVDMWSIGCI F AEMA------ Site 1702
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO SLDMWSLGCM L ASMIF----- Site 1702
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de GVDLWAVGCI M GELL------ Site 1702
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos PIDIWSFGCI L AELL------ Site 1702
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. PVDLWSVGCI F AEMF------ Site 1702
Monosiga.brevicollis.CDK1 PVDVWSIGTI F AEMA------ Site 1702
Saccharomyces.cerevisiae.SKY1 GADIWSTACL I FELI------ Site 1702
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP AIDVWSVGCI L AEML------ Site 1702
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U AVDVWAVGCV A VEIQ------ Site 1702
Drosophila.melanogaster.GSK3..Protein.kinase.shagg KIDVWSAGCV L AELL------ Site 1702
Species Residue at Site 2568
in 'msaprobs'
muscle

The residue for every species at site 2568 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas RDDIEALGYV L MYFL------ Site 1702
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. GVDMWSLGCI L GEML------ Site 1702
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d AVDIWAIGCL V IEML------ Site 1702
Dictyostelium.discoideum.CDK10..Probable.cyclin.de AVDLWSIGSI F GELL------ Site 1702
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d SVDMWSVGCI L GELS------ Site 1702
Ajellomyces.capsulatus.CDK1 GVDMWSVGAI F AEMC------ Site 1702
Dictystelium.discoideum.MAPK3..Extracellular.signa AIDIWSVGCI F AELL------ Site 1702
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep PVDLWSVGCI F AEMF------ Site 1702
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep SIDMWAVGCI L AELL------ Site 1702
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac NVDLWSVGCI M GEMV------ Site 1702
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. TVDIWSVGCI M AEML------ Site 1702
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO TVDIWSAACI I FEMF------ Site 1702
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri AIDIWSVGCI F AELL------ Site 1702
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha NVDMWSVGCI M GEMV------ Site 1702
Saccharomyces.cerevisiae.CDK1 GVDTWSIGCI F AEMC------ Site 1702
Lodderomyces.elongisporus.IME2 PIDIWAFGAV A AEVI------ Site 1702
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen TVDIWSVGCI M AELL------ Site 1702
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un PCDVWSVGCI I FEYY------ Site 1702
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar AVDMWSVGCI L GELS------ Site 1702
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. KIDIWSAGCV M AELL------ Site 1702
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D GIDMWGLGCI L GEMI------ Site 1702
Homo.sapiens.CLK4..Dual.specificity.protein.kinase PCDVWSIGCI L IEYY------ Site 1702
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U AIDMWSLGCV I AELF------ Site 1702
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d PVDVWAIGCV F AELL------ Site 1702
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen SIDVWSAGCV L AELL------ Site 1702
Species Residue at Site 2568
in 'msaprobs'
muscle

The residue for every species at site 2568 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 GVDMWSIGCI F AEMA------ Site 1702
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep PVDMWSVGCI F AEMF------ Site 1702
Cryptococcus.neoformans.SSN3..Serine.threonine.pro AVDIWAVGCI Y AELL------ Site 1702
Salmo.salar.CDK1 AVDIWSLGCI F AEMI------ Site 1702
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d GVDMWAVGCI L AELL------ Site 1702
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d GVDLWSVGCI M GELL------ Site 1702
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi KSDVWSLGCI L YYMT------ Site 1702
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen SIDVWSAGCV L AELL------ Site 1702
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable KSDIWSLGCI I LDMT------ Site 1702
Aspergillus.fumigatus.IME2 PVDMWAVGAM A VEIA------ Site 1702
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan AIDIWAIGCI F AELL------ Site 1702
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha PCDVWSIGCI L FEYY------ Site 1702
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha TVDIWSIGCI M AEML------ Site 1702
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S AVDIWSVGCI F AELL------ Site 1702
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma AIDMWSLGCV I AELF------ Site 1702
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina SIDIWSVGCI L AEML------ Site 1702
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d QIDMWGVGCI F FEMA------ Site 1702
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. SIDMWAVGCI L AELL------ Site 1702
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de PVDVWAVGCV F AELL------ Site 1702
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S NVDIWSVGCI M GEMI------ Site 1702
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. TVDIWSVGCI M AEMI------ Site 1702
Candida.glabrata.IME2 PLDIWAFGCV A MEVT------ Site 1702
Homo.sapiens.MAK..Serine.threonine.protein.kinase. PIDVWAVGSI M AELY------ Site 1702
Schizosaccharomyces.pombe.IME2 PVDIYAAGCM A FEIA------ Site 1702
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P AIDVWSVGCI L AEML------ Site 1702
Species Residue at Site 2568
in 'msaprobs'
muscle

The residue for every species at site 2568 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl SIDMWSAGCI F AELA------ Site 1702
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom KVDVWSLGCV M AELH------ Site 1702
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. RDDMESLGYV L MYFN------ Site 1702
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d PIDMWGVGCI L YEMA------ Site 1702
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d SVDVWAVGCV F AELL------ Site 1702
Branchiostoma.floridae.CDK1 PVDVWSIGCI F AEMI------ Site 1702
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara PCDVWSIGCI I FEYY------ Site 1702
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH AIDIWSTGCV M AELM------ Site 1702
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD SIDIWAVGCL L PEML------ Site 1702
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR SIDVWSAGTV I AELL------ Site 1702
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. SIDMWAAGCI L A--------- Site 1702
Homo.sapiens.ICK..Serine.threonine.protein.kinase. PIDVWAVGCI M AEVY------ Site 1702
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci PCDVWSIGCI L FEYY------ Site 1702
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos AIDMWSLGCI L VEMH------ Site 1702
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep AVDIWSLGCI F AEMHLVCTQH Site 1702
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act AIDLWSVGCI F GEML------ Site 1702
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. TVDIWSVGCI M AELL------ Site 1702
Lachancea.thermotolerans.SKY1 SADIWSAACL I FELL------ Site 1702
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a AIDMWAAGCI F AEML------ Site 1702
Dictyostelium.discoideum.CDK1 PVDMWSVGCI F GEML------ Site 1702
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. TVDIWSVGCI M AEMI------ Site 1702
Xenopus.tropicalis.IME2 AVDIWSLGCI F AEMI------ Site 1702
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U AIDMWSLGCV I AELF------ Site 1702
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. SLDMWSLGCM L ASMIF----- Site 1702
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d AVDIWSLGCI F AEMI------ Site 1702
Species Residue at Site 2568
in 'msaprobs'
muscle

The residue for every species at site 2568 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara AVDIWSIGCI F AEMV------ Site 1702
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ELDIWGAGCI F IEMF------ Site 1702
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD GVDMWSIGCI L GELL------ Site 1702
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos AIDMWSLGCI L VEMH------ Site 1702
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen SIDVWSAGCV L AELL------ Site 1702
Drosophila.melanogaster.GSK3H..Putative.glycogen.s KIDMWSAGCV M SELL------ Site 1702
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD AMDLWSAGCV L SELL------ Site 1702
Encephalitozoon.cuniculi.CDK1 SVDVWSAACI M AEVV------ Site 1702
Saccharomyces.kluyveri.IME2 PVDVWAFGCV A LEVA------ Site 1702
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci PCDVWSIGCI L IEYY------ Site 1702
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a SIDIWSVGCI L AEML------ Site 1702
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ELDIWGAGCI F IEMF------ Site 1702
Cryptococcus.neoformans.IME2 PVDMWALGTI L AEML------ Site 1702
Homo.sapiens.HIPK4..Homeodomain.interacting.protei KVDVWSLGCV M AELH------ Site 1702
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote PADIWSTACM A FELA------ Site 1702
Candida.lusitaniae.IME2 PIDIWAFASV A VELV------ Site 1702
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom AIDMWSLGCV I AELF------ Site 1702
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A AIDIWAIGCI F AELL------ Site 1702
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep GVDLWAVGCI F GELL------ Site 1702
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. PVDVWAIGCV F AELI------ Site 1702
Gallus.gallus.CDK2 AVDIWSLGCI F AEMV------ Site 1702
Emericella.nidulans.CDK1 GVDMWSCGAI F AEMC------ Site 1702
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. KMDLWSAGCV F YEIA------ Site 1702
Homo.sapiens.CDK1 PVDIWSIGTI F AELA------ Site 1702
Candida.albicans.CDK1 GVDMWSVGCI F AEMC------ Site 1702
Species Residue at Site 2568
in 'msaprobs'
muscle

The residue for every species at site 2568 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca SLDMWSLGCM L ASMIF----- Site 1702
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a AIDLWSVGCI F GEML------ Site 1702
Mus.musculus.ICK..Serine.threonine.protein.kinase. PIDIWAVGCI M AEVY------ Site 1702
Saccharomyces.castelli.IME2 PLDIWAFGCV A VEAT------ Site 1702
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ACDVWSLGCI L IEYY------ Site 1702
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep GVDMWAVGCI L AELL------ Site 1702
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. CLDMWGVGCI F VEMI------ Site 1702
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly AIDIWSLGCV M AELL------ Site 1702
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS KIDIWSVGVI L LSLL------ Site 1702
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli GVDMWAVGSI L AELL------ Site 1702
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho PIDLWGAGCI M AEMW------ Site 1702
Homo.sapiens.HIPK2..Homeodomain.interacting.protei AIDMWSLGCV I AELF------ Site 1702
Acyrthosiphon.pisum.CDK1 AVDLWSLGCI F TEMM------ Site 1702
Candida.tropicalis.CDK1 PIDIWAFGAV A VEIA------ Site 1702
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin AIDIWAIGCI F AELL------ Site 1702
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G DIDIWSAGCV F AEVL------ Site 1702
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR SLDMWSLGCM L ASMIF----- Site 1702
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de QIDMWGVGCI F YEMA------ Site 1702
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 SLDMWSLGCM F AGMIF----- Site 1702
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d QIDMWGVGCI F FEMA------ Site 1702
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA TVDIWSIGCI M AEML------ Site 1702
Candida.albicans.SSN3..Serine.threonine.protein.ki AVDLWAVGCI L AELL------ Site 1702
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF KMDMWGVGCV F FEIV------ Site 1702
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA DIDVWSAGCV L AELL------ Site 1702
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara TVDIWSVGCI M GEMF------ Site 1702
Species Residue at Site 2568
in 'msaprobs'
muscle

The residue for every species at site 2568 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de AIDMWSVGCI M AEMY------ Site 1702
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei SLDMWSLGCM L ASMIF----- Site 1702
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U AIDMWSLGCV I AELF------ Site 1702
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d AVDMWSVGCI F GELL------ Site 1702
Candida.dubliniensis.IME2 PIDIWAFGAV A VETA------ Site 1702
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a NVDIWSVGCI M AEMV------ Site 1702
Aspergillus.niger.IME2 PVDMWAVGAM A VEIA------ Site 1702
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge TVDIWSVGCI M AELL------ Site 1702
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d PVDIWALGCM I IEMA------ Site 1702
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. CLDMWGVGCI F VEMI------ Site 1702
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein SLDMWRLGCM L ASMIF----- Site 1702
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty KIDMWSLGCI L VEMH------ Site 1702
Schizosaccharomyces.japonicus.IME2 PVDVYAVGCM A FEIA------ Site 1702
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. NVDVWSIGCI F GELI------ Site 1702
Gallus.gallus.CDK1 PVDIWSIGTI F AELA------ Site 1702
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep SIDMWSAGCI F AELA------ Site 1702
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P KIDVWSTGCV M AELM------ Site 1702
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE TVDMWSIGCI I YEIY------ Site 1702
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. SIDVWSAGTV M AELL------ Site 1702
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. TVDIWSVGCI M AEMI------ Site 1702
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ SLDLWSVGCM L AAIVF----- Site 1702
Kluyveromyces.waltii.IME2 PLDIWAFGCV V VEVA------ Site 1702
Debaryomyces.hansenii.SKY1 SADLWSFACL I FELL------ Site 1702
Saccharomyces.cerevisiae.IME2 PLDIWAFGCV A VEVT------ Site 1702
Schizosaccharomyces.japonicus.b.IME2 AVDMYAFGCI A YELA------ Site 1702
Species Residue at Site 2568
in 'msaprobs'
muscle

The residue for every species at site 2568 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un PVDLWSVGCI F AEMF------ Site 1702
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein SLDMWSLGCM L ASMIF----- Site 1702
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a AIDMWAAGCI F AEML------ Site 1702
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep PVDLWSVGCI F AEMF------ Site 1702
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST QVDVWSSACV I AELL------ Site 1702
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk TVDIWSVGCI M AEMY------ Site 1702
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de PVDIWALGCM I IEMA------ Site 1702
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act NVDVWSIGCI M AEMV------ Site 1702
Candida.albicans.IME2 PIDIWAFGAV A VETA------ Site 1702
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d PVDVWSAGCI F AEMF------ Site 1702
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k AIDIWSVGCI F AEII------ Site 1702
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. TVDIWSVGCI M AELL------ Site 1702
Kluyveromyces.lactis.IME2 PLDIWAYGCV V VELA------ Site 1702
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina AIDLWSVGCI F GEML------ Site 1702
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. NVDIWSVGCI M GEMV------ Site 1702
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. TVDIWSVGCI M AELL------ Site 1702
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 RDDMESLGYV M MYFN------ Site 1702
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. TVDIWSVGCI M AELL------ Site 1702
Amphimedon.queenslandica.CDK1 PVDIWSIGCI F AEMV------ Site 1702
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d SVDIWAIGCV F AELL------ Site 1702
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U PVDIWSIGCI F AEMM------ Site 1702
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME PIDVWSVGCI F AEFL------ Site 1702
Neurospora.crassa.IME2 PVDIWAIGAM A VEIA------ Site 1702
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME SIDMWSAGCI L AELA------ Site 1702
Dictyostelium.discoideum.DYRK2..Probable.serine.th SIDIWSLGCI L VEIF------ Site 1702
Species Residue at Site 2568
in 'msaprobs'
muscle

The residue for every species at site 2568 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep PVDMWSVGCI F AEMF------ Site 1702
Hydra.magnipapillata.CDK1 AVDIWSIGCI F VEMM------ Site 1702
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar SIDMWAVGCI L AELL------ Site 1702
Ashbya.gossypii.IME2 PLDIWAFGCV A VEVA------ Site 1702
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi RSDVWSLGCI L YYMT------ Site 1702
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos PIDIWSFGCI L AELL------ Site 1702
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p QIDIWSSGCV M AELL------ Site 1702
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace GVDMWSIGCI L AEML------ Site 1702
Schizosaccharomyces.pombe.b.IME2 SVDLYAFGCI V FEIY------ Site 1702
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a SIDIWSVGCI L AEML------ Site 1702
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom AIDMWSLGCV I AELF------ Site 1702
Schizosaccharomyces.pombe.CDK1 GVDIWSVGCI F AEMI------ Site 1702
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch PCDVWSIGCI L FEYY------ Site 1702
Saccoglossus.kowalevskii.CDK1 ---------- - --EI------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas RDDLESLGYV L MYFN------ Site 1702
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac NVDLWSVGCI M GEMV------ Site 1702
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep AVDI-SIGCI F AEMV------ Site 1702
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable KSDIWSLGCI I LDMA------ Site 1702
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep AVDIWSIGCI F AEMV------ Site 1702
Yarrowia.lipolytica.IME2 PVDIWAFGAM A AEVA------ Site 1702
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil AVDLWSVGCI F AELI------ Site 1702
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli AVDIWSLGCI F AEMI------ Site 1702
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K KIDIWSVGVI L LSFI------ Site 1702
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly KIDVWSTGCV M AELM------ Site 1702
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk AIDIWSTGCV M AELM------ Site 1702
Species Residue at Site 2568
in 'msaprobs'
muscle

The residue for every species at site 2568 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro KIDMWSLGCI L VEMH------ Site 1702
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo AIDIWSVGCI F AELL------ Site 1702
Scheffersomyces.stipitis.SKY1 SSDLWSFACL V FELL------ Site 1702
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep SIDMWSAGCI F AELA------ Site 1702

Generated by PhyloBot at 02:17, October 16th 2019
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