cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 2526 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2526 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2526 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 2526 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 2526
in 'msaprobs'
muscle

The residue for every species at site 2526 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 RWYRAPELLL R D---S----- Site 1674
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD RQYRAPEAIV K A--------- Site 1674
Danio.rerio.CDK1 LWYRAPEILL G C---K----- Site 1674
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge RWYRAPELLL N S---S----- Site 1674
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d LWYRPPDVLF G A---K----- Site 1674
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK LWYRPPDVLL G A---R----- Site 1674
Candida.guilliermondii.IME2 RWYRAPEMLL R R---K----- Site 1674
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -PYRENKNLT G T---A----- Site 1605
Chlamydomonas.reinhardtii.LF4 RWYRAPECLL T D---G----- Site 1674
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g RYYRAPELVF G A---T----- Site 1674
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -VYREDKNLT G T---A----- Site 1605
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 -PYREKKSLS G T---A----- Site 1605
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho FWYRAPELLL G A---R----- Site 1674
Schizosaccharomyces.octosporus.b.IME2 RWYRAPELLL R A---K----- Site 1674
Candida.albicans.MAPK3..Extracellular.signal.regul RWYRAPEIML T F---Q----- Site 1674
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. RYFKGPELLV D L---Q----- Site 1674
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -PYREGKNLT G T---A----- Site 1605
Suberites.domuncula.JNK..Stress.activated.protein. RYYRAPEVIV G M--------- Site 1674
Homo.sapiens.CLK3..Dual.specificity.protein.kinase RHYRPPEVIL E L--------- Site 1674
Aedes.aegypti.CDK1 LWYRAPEVLL G S---P----- Site 1674
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci RHYRAPEVIL A L--------- Site 1674
Homo.sapiens.CLK2..Dual.specificity.protein.kinase RHYRAPEVIL E L--------- Site 1674
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos RFYRSPEVIL G H--------- Site 1674
Homo.sapiens.HIPK1..Homeodomain.interacting.protei RYYRAPEIIL G L--------- Site 1674
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar RWYRSPELLV G D---T----- Site 1674
Species Residue at Site 2526
in 'msaprobs'
muscle

The residue for every species at site 2526 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 LWYRPPDLLL G S---K----- Site 1674
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. RYFKGPELLV D Y---Q----- Site 1674
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM RWYRAPEIML N S---K----- Site 1674
Strongylocentrotus.purpuratus.CDK1 LWYRAPEILL G C---R----- Site 1674
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -PYRENKNLT G T---A----- Site 1605
Drosophila.melanogaster.CDK1 LWYRAPEVLL G S---P----- Site 1674
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -SFKDNKSLT G T---A----- Site 1605
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -PYREHKNLT G T---A----- Site 1605
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH RQYRAPEVIL K S--------- Site 1674
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d LWYRPPDVLL G S---T----- Site 1674
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. LWYRPPDVLL G S---T----- Site 1674
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET RYYRAPEVIL G M--------- Site 1674
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 RWYRAPELLV G D---V----- Site 1674
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U RYYRAPEVIL G M--------- Site 1674
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. RWYRAPEVIL S W---M----- Site 1674
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo QYYRAPEILM G S---R----- Site 1674
Bombus.terrestris.CDK1 LWYRAPEILL G T---K----- Site 1674
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 RQYRSLEVLI G S--------- Site 1674
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar RWYRAPELLV G D---T----- Site 1674
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. RYYRAPEVIL G M--------- Site 1674
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d LWYRPPELLL G E---E----- Site 1674
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. RWYRAPECLL T D---G----- Site 1674
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. RYYRAPELIF G N---Q----- Site 1674
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G RYYRAPELIF G N---Q----- Site 1674
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -VYREDKNLT G T---A----- Site 1605
Species Residue at Site 2526
in 'msaprobs'
muscle

The residue for every species at site 2526 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -PYRENKNLT G T---A----- Site 1605
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO RYYRAPEIIL G L--------- Site 1674
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C RYFKGPELLV D L---Q----- Site 1674
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl QYYRAPEILM G S---R----- Site 1674
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 RWYRSPELLV G D---T----- Site 1674
Homo.sapiens.HIPK3..Homeodomain.interacting.protei RYYRAPEIIL G L--------- Site 1674
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O QWYRAPELLL G A---K----- Site 1674
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d RWYRSPELLL G A--------- Site 1674
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci RHYRAPEVIL E L--------- Site 1674
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O LWYRAPELLL G A---K----- Site 1674
Naegleria.gruberi.LF4 RWYRAPECLL T D---G----- Site 1674
Saccharomyces.bayanus.IME2 RWYRSPEILL R S---G----- Site 1674
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. RYFKGPELLV D Y---Q----- Site 1674
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a RWYRAPEVIL S W---M----- Site 1674
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki IFYRAPELLF G A---K----- Site 1674
Dictyostelium.discoideum.DYRK1..Probable.serine.th RFYRSPEILL E L--------- Site 1674
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos RFYRSPEVLL G T--------- Site 1674
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos RFYRAPEVIL G A--------- Site 1674
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d RWYRSPELLL G A--------- Site 1674
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a RWYRAPEVLL S S---R----- Site 1674
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific LNYMPPEAIK D T---SSN--- Site 1674
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos RFYRSPEVIL G H--------- Site 1674
Aspergillus.nidulans.IME2 RWYRAPEVLL R A---G----- Site 1674
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi PGFRAPEVLT K C---P----- Site 1674
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se QYYRAPELLM G A---R----- Site 1674
Species Residue at Site 2526
in 'msaprobs'
muscle

The residue for every species at site 2526 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. RWYRAPEVLL R S---S----- Site 1674
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep LWYRAPEILL G C---K----- Site 1674
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. RYYRAPEVIL G M--------- Site 1674
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. RYYRAPELIF G A---T----- Site 1674
Penicillium.marneffei.IME2 RWYRAPEVLL R A---G----- Site 1674
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen RWYRAPEIML N W---M----- Site 1674
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a KWYRSPRLLL S P---N----- Site 1674
Drosophila.melanogaster.MAK RWYRAPEVLL H S---T----- Site 1674
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH RFYRAPEIIL G F--------- Site 1674
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr RFYRAPEIII G K--------- Site 1674
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de LWYRPPELLL G E---E----- Site 1674
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep IWYRSPELLL G S---K----- Site 1674
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d LWYRAPELLL G T---T----- Site 1674
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin RYYRAPEVIL G M--------- Site 1674
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a RYYRAPEVIL G M--------- Site 1674
Homo.sapiens.CLK1..Dual.specificity.protein.kinase RHYRAPEVIL A L--------- Site 1674
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis PGFRAPEVLT K C---P----- Site 1674
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -VYREDKNLT G T---A----- Site 1605
Candida.parapsilosis.IME2 RWYRSPEILL R Q---S----- Site 1674
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p IWYRAPELLL G A---H----- Site 1674
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen RYYRAPELIF G A---T----- Site 1674
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. RYYRAPEVIL G M--------- Site 1674
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki RYFKGPELLV D Y---Q----- Site 1674
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U RHYRAPEVIL A L--------- Site 1674
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a KWYRSPRLLL S P---N----- Site 1674
Species Residue at Site 2526
in 'msaprobs'
muscle

The residue for every species at site 2526 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d LWYRPPDILL G S---T----- Site 1674
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. RYFKGPELLV D Y---Q----- Site 1674
Yarrowia.lipolytica.SSN3..Serine.threonine.protein IWYRAPELLL G A---R----- Site 1674
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. RWYRAPEVIL N W---M----- Site 1674
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos RFYRSPEVLL G T--------- Site 1674
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE RYFKGPELLV D Y---Q----- Site 1674
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH RYYRAPELIF G S---T----- Site 1674
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD RHYRAPELIF G S---T----- Site 1674
Candida.orthopsilosis.IME2 RWYRSPEILL R Q---N----- Site 1674
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot RWYRAPELLF G A---R----- Site 1674
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str RYYRAPEVIL G M--------- Site 1674
Debaryomyces.hansenii.IME2 RWYRSPEILL R R---M----- Site 1674
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati RYYRAPELIF G A---T----- Site 1674
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin IWYRAPELLL G A---R----- Site 1674
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE LWYRPPEILL G S---Q----- Site 1674
Caenorhabditis.briggsae.CDK1 LWYRAPEILM G A---Q----- Site 1674
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO RYFKGPELLV D Y---Q----- Site 1674
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de RWYRAPELLY G A---R----- Site 1674
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos RFYRAPEIIL G C--------- Site 1674
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. LWYRAPEVLL Q S--------- Site 1674
Monosiga.brevicollis.CDK1 LWYRAPEVLL G S---S----- Site 1674
Saccharomyces.cerevisiae.SKY1 REYRSPEVLL G A--------- Site 1674
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP RWYRAPEIML T F---Q----- Site 1674
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U EYKQSP-LMF A CVCVC----- Site 1674
Drosophila.melanogaster.GSK3..Protein.kinase.shagg RYYRAPELIF G A---I----- Site 1674
Species Residue at Site 2526
in 'msaprobs'
muscle

The residue for every species at site 2526 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -PYKEGKNLT G T---A----- Site 1605
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. RWYRAPEVLL S S---H----- Site 1674
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d RWYRAPELLV G D---V----- Site 1674
Dictyostelium.discoideum.CDK10..Probable.cyclin.de LWYRSPELLL G C---Q----- Site 1674
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d RWYRSPELLL G A--------- Site 1674
Ajellomyces.capsulatus.CDK1 LWYRAPEILL G G---R----- Site 1674
Dictystelium.discoideum.MAPK3..Extracellular.signa RWYRAPEVIL S W---N----- Site 1674
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep LWYRAPEVLL Q S--------- Site 1674
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep LWYRAPELLL G T---T----- Site 1674
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac RYYRAPEVIL G M--------- Site 1674
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. RWYRAPEVIL S W---M----- Site 1674
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO LWYRAPEVLL A Q--------- Site 1674
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri QYYRAPEILM G S---R----- Site 1674
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha RYYRAPEVIL G M--------- Site 1674
Saccharomyces.cerevisiae.CDK1 LWYRAPEVLL G G---K----- Site 1674
Lodderomyces.elongisporus.IME2 RWYRLPEILL R Q---Q----- Site 1674
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen RWYRAPEIML N W---M----- Site 1674
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un RHYRAPEVIL E L--------- Site 1674
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar RWYRSPELLL G A--------- Site 1674
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. RYYRAPELIF G A---T----- Site 1674
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D RWYRAPEILV A S---R----- Site 1674
Homo.sapiens.CLK4..Dual.specificity.protein.kinase RHYRAPEVIL A L--------- Site 1674
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U RYYRAPEIIL G L--------- Site 1674
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d RWYRSPELLV G D---T----- Site 1674
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen RYYRAPELIF G A---T----- Site 1674
Species Residue at Site 2526
in 'msaprobs'
muscle

The residue for every species at site 2526 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 LWYRAPEILM G A---Q----- Site 1674
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep LWYRAPEVLL Q S--------- Site 1674
Cryptococcus.neoformans.SSN3..Serine.threonine.pro IWYRAPELIL G A---K----- Site 1674
Salmo.salar.CDK1 LWYRAPEILL G C---K----- Site 1674
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d RWYRSPELLF G A---R----- Site 1674
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d RWYRAPELLY G A---R----- Site 1674
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi VNYMPPEAIK D M---SSSREN Site 1674
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen RYYRAPELIF G A---T----- Site 1674
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable KSWMAPEALN - F---------  
Aspergillus.fumigatus.IME2 RWYRAPEVLL R A---G----- Site 1674
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan FWYRAPELLL G A---R----- Site 1674
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha RHYRAPEVIL E L--------- Site 1674
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha RWYRAPEVIL N W---M----- Site 1674
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S QYYRAPELLM G A---R----- Site 1674
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma RYYRAPEIIL G L--------- Site 1674
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina RWYRAPEIML N S---K----- Site 1674
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d LWYRPPDVLL G S---S----- Site 1674
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. LWYRAPELLL G T---T----- Site 1674
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de RWYRAPELLV G D---T----- Site 1674
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S RYYRAPEVIL G M--------- Site 1674
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. RWYRAPEVIL N W---M----- Site 1674
Candida.glabrata.IME2 RWYRSPEILL R S---G----- Site 1674
Homo.sapiens.MAK..Serine.threonine.protein.kinase. RWYRAPEVLL R S---S----- Site 1674
Schizosaccharomyces.pombe.IME2 RWYRAPELLL R D---S----- Site 1674
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P RWYRAPEIML T F---Q----- Site 1674
Species Residue at Site 2526
in 'msaprobs'
muscle

The residue for every species at site 2526 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl LWYRPPDVLF G A---K----- Site 1674
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom RFYRAPEILL G L--------- Site 1674
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -PYREDKNLT G T---A----- Site 1605
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d LWYRPPDVLL G S---T----- Site 1674
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d RWYRAPELLV G D---T----- Site 1674
Branchiostoma.floridae.CDK1 LWYRAPEILL G S---K----- Site 1674
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara RHYRAPEVIL E L--------- Site 1674
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH RYYRAPELIF G A---T----- Site 1674
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD RWYRAPELIV K E---S----- Site 1674
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR RYYRAPELIF G A---T----- Site 1674
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. LWYRAPELLL G M---T----- Site 1674
Homo.sapiens.ICK..Serine.threonine.protein.kinase. RWYRAPEVLL R S---T----- Site 1674
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci RHYRPPEVIL E L--------- Site 1674
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos RFYRSPEVLL G M--------- Site 1674
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep LWYRAPEILL G C---K----- Site 1674
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act RWYRAPELML S L---H----- Site 1674
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. RWYRAPEIML N W---M----- Site 1674
Lachancea.thermotolerans.SKY1 REYRSPEVLL G C--------- Site 1674
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a KWYRSPRLLL S P---N----- Site 1674
Dictyostelium.discoideum.CDK1 LWYRAPEVLL G S---K----- Site 1674
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. RWYRAPEVIL N W---M----- Site 1674
Xenopus.tropicalis.IME2 LWYRAPEILL G C---K----- Site 1674
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U RYYRAPEIIL G L--------- Site 1674
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. RYFKGPELLV D Y---Q----- Site 1674
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d LWYRAPEILL G C---K----- Site 1674
Species Residue at Site 2526
in 'msaprobs'
muscle

The residue for every species at site 2526 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara LWYRAPEILL G C---K----- Site 1674
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. LWYRPPDALL G A---T----- Site 1674
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD RWYRAPEILL G S---T----- Site 1674
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos RFYRSPEVLL G M--------- Site 1674
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen RYYRAPELIF G A---T----- Site 1674
Drosophila.melanogaster.GSK3H..Putative.glycogen.s RYYRAPELIF G S---T----- Site 1674
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD LWYRAPEVLF G D---R----- Site 1674
Encephalitozoon.cuniculi.CDK1 LWYRPPELLL G C---K----- Site 1674
Saccharomyces.kluyveri.IME2 RWYRSPEILL R Q---S----- Site 1674
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci RHYRAPEVIL A L--------- Site 1674
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a RWYRAPEIML N S---K----- Site 1674
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. LWYRPPDALL G A---T----- Site 1674
Cryptococcus.neoformans.IME2 RWYRAPEVLL R S---S----- Site 1674
Homo.sapiens.HIPK4..Homeodomain.interacting.protei RFYRAPEILL G L--------- Site 1674
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote RQYRSLEVLI G S--------- Site 1674
Candida.lusitaniae.IME2 RWYRAPEILL R H---A----- Site 1674
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom RYYRAPEIIL G L--------- Site 1674
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A FWYRAPELLL G A---R----- Site 1674
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep RWYRAPELLY G A---R----- Site 1674
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. RWYRAPELLV G D---T----- Site 1674
Gallus.gallus.CDK2 LWYRAPEILL G C---K----- Site 1674
Emericella.nidulans.CDK1 LWYRSPEILL G G---R----- Site 1674
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. RWYRAPECLL T D---G----- Site 1674
Homo.sapiens.CDK1 LWYRSPEVLL G S---A----- Site 1674
Candida.albicans.CDK1 LWYRAPEILL G G---K----- Site 1674
Species Residue at Site 2526
in 'msaprobs'
muscle

The residue for every species at site 2526 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca RYFKGPELLV D Y---Q----- Site 1674
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a RWYRAPELML S L---H----- Site 1674
Mus.musculus.ICK..Serine.threonine.protein.kinase. RWYRAPEVLL R S---T----- Site 1674
Saccharomyces.castelli.IME2 RWYRSPEILL R N---G----- Site 1674
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec RHYRAPEVIL D L--------- Site 1674
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep RWYRAPELLF G A---R----- Site 1674
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. LWYRPPDVLL G S---T----- Site 1674
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly RYYRAPELIF G A---T----- Site 1674
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS RGFRAPEVLM K C---G----- Site 1674
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli RWYRAPELLF G A---R----- Site 1674
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho LWYRPPELLL G E---R----- Site 1674
Homo.sapiens.HIPK2..Homeodomain.interacting.protei RYYRAPEIIL G L--------- Site 1674
Acyrthosiphon.pisum.CDK1 LWYRAPEILL G A---K----- Site 1674
Candida.tropicalis.CDK1 RWYRSPEILL R Q---K----- Site 1674
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin FWYRAPELLL G A---R----- Site 1674
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G RYYRAPELIF G A---T----- Site 1674
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR RYFKGPELLV D Y---Q----- Site 1674
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de LWYRPPDILL G S---T----- Site 1674
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 RYFKGPELLV D L---Q----- Site 1674
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d LWYRPPDVLL G S---S----- Site 1674
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA RWYRAPEVIL N W---M----- Site 1674
Candida.albicans.SSN3..Serine.threonine.protein.ki IWYRAPELLL G T---R----- Site 1674
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF RWYRAPECLL T D---G----- Site 1674
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA RYYRAPELIF G A---T----- Site 1674
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara RWYRAPEVIL N W---M----- Site 1674
Species Residue at Site 2526
in 'msaprobs'
muscle

The residue for every species at site 2526 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de RWYRSPELLL G E---R----- Site 1674
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei RYFKGPELLV D Y---Q----- Site 1674
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U RYYRAPEVIL G L--------- Site 1674
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d LWYRAPELLL G A---K----- Site 1674
Candida.dubliniensis.IME2 RWYRSPEILL R Q---K----- Site 1674
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a RYYRAPEVIL G M--------- Site 1674
Aspergillus.niger.IME2 RWYRAPEVLL R A---G----- Site 1674
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge RWYRAPEIML N W---M----- Site 1674
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d RWYRAPELVL K D---T----- Site 1674
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. LWYRPPDVLL G S---T----- Site 1674
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein RYFKGPELLV D Y---Q----- Site 1674
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty RFYRSPEVLL G I--------- Site 1674
Schizosaccharomyces.japonicus.IME2 RWYRAPELLL R D---P----- Site 1674
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. RYYRAPEVIL G M--------- Site 1674
Gallus.gallus.CDK1 LWYRSPEVLL G S---A----- Site 1674
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep LWYRPPDVLF G A---K----- Site 1674
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P RYYRAPELIF G A---T----- Site 1674
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE LWYRAPEVLL Q S--------- Site 1674
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. RYYRAPELIF G A---T----- Site 1674
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. RWYRAPEVIL N W---M----- Site 1674
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ RYHKGPELLV N L---N----- Site 1674
Kluyveromyces.waltii.IME2 RWYRSPEILL R K---G----- Site 1674
Debaryomyces.hansenii.SKY1 RQYRSPEVLL G Y--------- Site 1674
Saccharomyces.cerevisiae.IME2 RWYRSPEILL R S---G----- Site 1674
Schizosaccharomyces.japonicus.b.IME2 RWYRAPELLL R T---R----- Site 1674
Species Residue at Site 2526
in 'msaprobs'
muscle

The residue for every species at site 2526 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un LWYRAPEVLL Q S--------- Site 1674
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein RYFKGPELLV D Y---Q----- Site 1674
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a KWYRSPRLLL S P---N----- Site 1674
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep LWYRAPEVLL Q S--------- Site 1674
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST RYYRAPELMF G A---T----- Site 1674
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk RWYRAPEVIL N W---M----- Site 1674
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de RWYRAPELVL K D---T----- Site 1674
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act RYYRAPEVIL G M--------- Site 1674
Candida.albicans.IME2 RWYRSPEILL R Q---K----- Site 1674
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d LWYRAPEVLL Q S--------- Site 1674
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k LWYRAPELLL D T---E----- Site 1674
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. RWYRAPEIML N W---M----- Site 1674
Kluyveromyces.lactis.IME2 RWYRSPEILL R K---G----- Site 1674
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina RWYRAPELML S L---H----- Site 1674
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. RYYRAPEVIL G M--------- Site 1674
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. RWYRAPEIML N W---M----- Site 1674
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -VYREDKNLT G T---A----- Site 1605
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. RWYRAPEIML N W---M----- Site 1674
Amphimedon.queenslandica.CDK1 LWYRSPELLL G S---Q----- Site 1674
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d RWYRAPELLV G D---T----- Site 1674
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U LWYRAPEILL G C---R----- Site 1674
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME LWYRAPELLL C S---P----- Site 1674
Neurospora.crassa.IME2 RWYRAPEVLL R A---G----- Site 1674
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME LWYRPPDVLF G A---K----- Site 1674
Dictyostelium.discoideum.DYRK2..Probable.serine.th RFYRSPEVIL G T--------- Site 1674
Species Residue at Site 2526
in 'msaprobs'
muscle

The residue for every species at site 2526 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep LWYRAPEVLL Q S--------- Site 1674
Hydra.magnipapillata.CDK1 LWYRAPEILL G T---K----- Site 1674
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar LWYRAPELLL G V---T----- Site 1674
Ashbya.gossypii.IME2 RWYRSPEILL R Q---G----- Site 1674
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi VNYMAPEAIR D M---SSSREN Site 1674
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos RFYRAPEIIL G S--------- Site 1674
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p RYYRAPELIF G A---T----- Site 1674
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace RWYRAPEILL G S---S----- Site 1674
Schizosaccharomyces.pombe.b.IME2 RWYRAPELLL R S---G----- Site 1674
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a RWYRAPEIML N S---K----- Site 1674
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom RYYRAPEIIL G L--------- Site 1674
Schizosaccharomyces.pombe.CDK1 LWYRAPEVLL G S---R----- Site 1674
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch RHYRAPEVIL E L--------- Site 1674
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -PYRENKNLT G T---A----- Site 1605
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac RYYRAPEVIL G M--------- Site 1674
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep LWYRAPEILL G S---K----- Site 1674
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable KSWMAPEALK - F---------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep LWYRAPEILL G S---K----- Site 1674
Yarrowia.lipolytica.IME2 RWYRAPEILL R C---E----- Site 1674
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil IWYRAPELLL G A---R----- Site 1674
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli LWYRAPEILL G C---K----- Site 1674
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K RGFRAPEVLM K C---S----- Site 1674
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly RYYRAPELIF G A---T----- Site 1674
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk RYYRAPELIF G A---T----- Site 1674
Species Residue at Site 2526
in 'msaprobs'
muscle

The residue for every species at site 2526 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro RFYRSPEVLL G I--------- Site 1674
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo QYYRAPEILM G S---R----- Site 1674
Scheffersomyces.stipitis.SKY1 RQYRSPEVLL G Y--------- Site 1674
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep LWYRPPDVLF G A---K----- Site 1674

Generated by PhyloBot at 16:19, October 23rd 2019
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