cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 2513 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2513 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2513 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 2513 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 2513
in 'msaprobs'
muscle

The residue for every species at site 2513 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 --Y----TEY V STRWYRAPEL Site 1604
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD --F----TDD I QTRQYRAPEA Site 1604
Danio.rerio.CDK1 --Y----THE V VTLWYRAPEI Site 1604
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge --M----TEY V VTRWYRAPEL Site 1604
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d --Y----SAE V VTLWYRPPDV Site 1604
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK --Y----SNE V VTLWYRPPDV Site 1604
Candida.guilliermondii.IME2 --F----TTY I STRWYRAPEM Site 1604
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -------HKH I ---PYRENKN Site 1547
Chlamydomonas.reinhardtii.LF4 --Y----TEY I STRWYRAPEC Site 1604
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g --N----VSY I CSRYYRAPEL Site 1604
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -------RHH I ---VYREDKN Site 1595
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 -------KQH I ---PYREKKS Site 1547
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ADL----DPV V VTFWYRAPEL Site 1604
Schizosaccharomyces.octosporus.b.IME2 --L----TEY V STRWYRAPEL Site 1604
Candida.albicans.MAPK3..Extracellular.signal.regul --M----TEY V ATRWYRAPEI Site 1604
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. --Y----NVR V ASRYFKGPEL Site 1604
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -------HVH I ---PYREGKN Site 1547
Suberites.domuncula.JNK..Stress.activated.protein. --M----TPY V VTRYYRAPEV Site 1604
Homo.sapiens.CLK3..Dual.specificity.protein.kinase --H----TTI V ATRHYRPPEV Site 1604
Aedes.aegypti.CDK1 --Y----THE I VTLWYRAPEV Site 1604
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci --H----STL V STRHYRAPEV Site 1604
Homo.sapiens.CLK2..Dual.specificity.protein.kinase --H----STI V STRHYRAPEV Site 1604
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos --V----YTY I QSRFYRSPEV Site 1604
Homo.sapiens.HIPK1..Homeodomain.interacting.protei --C----STY L QSRYYRAPEI Site 1604
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar --Y----TDY V ATRWYRSPEL Site 1604
Species Residue at Site 2513
in 'msaprobs'
muscle

The residue for every species at site 2513 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 --Y----TTE V VTLWYRPPDL Site 1604
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. --Y----NVR V ASRYFKGPEL Site 1604
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM --L----TEY V ATRWYRAPEI Site 1604
Strongylocentrotus.purpuratus.CDK1 --Y----THE V VTLWYRAPEI Site 1604
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -------NRH I ---PYRENKN Site 1547
Drosophila.melanogaster.CDK1 --Y----THE I VTLWYRAPEV Site 1604
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -------GRH I ---SFKDNKS Site 1546
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -------HQH I ---PYREHKN Site 1537
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH --F----AEE I QTRQYRAPEV Site 1604
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d --Y----SNE V VTLWYRPPDV Site 1604
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. --Y----SHE V VTLWYRPPDV Site 1604
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET --M----TPY V VTRYYRAPEV Site 1604
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 --Y----TDY V ATRWYRAPEL Site 1604
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U --M----TPY V VTRYYRAPEV Site 1604
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. --M----TGY V VTRWYRAPEV Site 1604
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo --M----TQE V VTQYYRAPEI Site 1604
Bombus.terrestris.CDK1 --Y----THE I VTLWYRAPEI Site 1604
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 --F----TED I QTRQYRSLEV Site 1604
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar --Y----TDY V ATRWYRAPEL Site 1604
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. --M----TPY V VTRYYRAPEV Site 1604
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d --Y----TNK V ITLWYRPPEL Site 1604
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. --Y----TEY I STRWYRAPEC Site 1604
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. --N----VAY I CSRYYRAPEL Site 1604
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G --N----VAY I CSRYYRAPEL Site 1604
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -------RHH I ---VYREDKN Site 1540
Species Residue at Site 2513
in 'msaprobs'
muscle

The residue for every species at site 2513 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -------HQH I ---PYRENKN Site 1547
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO --C----NTY L QSRYYRAPEI Site 1604
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C --Y----NVR V ASRYFKGPEL Site 1604
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl --M----TQE V VTQYYRAPEI Site 1604
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 --Y----TDY V ATRWYRSPEL Site 1604
Homo.sapiens.HIPK3..Homeodomain.interacting.protei --C----STY L QSRYYRAPEI Site 1604
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O --Y----TPV V VTQWYRAPEL Site 1604
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d --Y----TEY V ATRWYRSPEL Site 1604
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci --H----STI V STRHYRAPEV Site 1604
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O --Y----TPV V VTLWYRAPEL Site 1604
Naegleria.gruberi.LF4 --Y----TEY I STRWYRAPEC Site 1604
Saccharomyces.bayanus.IME2 --Y----TAY V STRWYRSPEI Site 1604
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. --Y----NVR V ASRYFKGPEL Site 1604
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a --M----TGY V VTRWYRAPEV Site 1604
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki --F----SPQ A VTIFYRAPEL Site 1604
Dictyostelium.discoideum.DYRK1..Probable.serine.th --M----YKY I QSRFYRSPEI Site 1604
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos --I----YQY I QSRFYRSPEV Site 1604
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos --V----YTY I QSRFYRAPEV Site 1604
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d --Y----TEY V ATRWYRSPEL Site 1604
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a --L----TEY V ATRWYRAPEV Site 1604
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific --K----DSQ V GTLNYMPPEA Site 1604
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos --V----YTY I QSRFYRSPEV Site 1604
Aspergillus.nidulans.IME2 --Y----TTY V STRWYRAPEV Site 1604
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi --V----APR A GTPGFRAPEV Site 1661
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se --M----THE V VTQYYRAPEL Site 1604
Species Residue at Site 2513
in 'msaprobs'
muscle

The residue for every species at site 2513 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. --Y----TDY V STRWYRAPEV Site 1604
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep --Y----THE V VTLWYRAPEI Site 1604
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. --M----TPY V VTRYYRAPEV Site 1604
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. --N----ISY I CSRYYRAPEL Site 1604
Penicillium.marneffei.IME2 --Y----TTY V STRWYRAPEV Site 1604
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen --M----TGY V ATRWYRAPEI Site 1604
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a --L----SEG L VTKWYRSPRL Site 1604
Drosophila.melanogaster.MAK --F----TDY V STRWYRAPEV Site 1604
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH --I----TPY L VSRFYRAPEI Site 1604
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr --I----TPY L VSRFYRAPEI Site 1604
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de --Y----TNK V ITLWYRPPEL Site 1604
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep N-E----NGV V VTIWYRSPEL Site 1604
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d --M----TPK V VTLWYRAPEL Site 1604
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin --M----TPY V VTRYYRAPEV Site 1604
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a --M----TPY V VTRYYRAPEV Site 1604
Homo.sapiens.CLK1..Dual.specificity.protein.kinase --H----STL V STRHYRAPEV Site 1604
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis --V----APR A GTPGFRAPEV Site 1661
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -------RHH I ---VYREDKN Site 1540
Candida.parapsilosis.IME2 --Y----TGY V STRWYRSPEI Site 1604
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p YSS----DRV V VTIWYRAPEL Site 1604
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen --N----VSY I CSRYYRAPEL Site 1604
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. --M----TPY V VTRYYRAPEV Site 1604
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki --Y----NVR V ASRYFKGPEL Site 1604
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U --H----STL V STRHYRAPEV Site 1604
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a --L----SEG L VTKWYRSPRL Site 1604
Species Residue at Site 2513
in 'msaprobs'
muscle

The residue for every species at site 2513 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d --Y----SNE V VTLWYRPPDI Site 1604
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. --Y----NVR V ASRYFKGPEL Site 1604
Yarrowia.lipolytica.SSN3..Serine.threonine.protein YSG----DKV V VTIWYRAPEL Site 1604
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. --M----TGY V VTRWYRAPEV Site 1604
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos --I----YQY I QSRFYRSPEV Site 1604
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE --Y----NVR V ASRYFKGPEL Site 1604
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH --N----VSY I CSRYYRAPEL Site 1604
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD --N----VSY I CSRHYRAPEL Site 1604
Candida.orthopsilosis.IME2 --Y----TGY V STRWYRSPEI Site 1604
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot --Y----THQ V VTRWYRAPEL Site 1604
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str --M----TPY V VTRYYRAPEV Site 1604
Debaryomyces.hansenii.IME2 --Y----TSY V ATRWYRSPEI Site 1604
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati --N----ISY I CSRYYRAPEL Site 1604
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin YTG----DKV V VTIWYRAPEL Site 1604
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE --Y----THE V VTLWYRPPEI Site 1604
Caenorhabditis.briggsae.CDK1 --Y----THE V VTLWYRAPEI Site 1604
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO --Y----NVR V ASRYFKGPEL Site 1604
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de --Y----THQ V ATRWYRAPEL Site 1604
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos --L----YTY I QSRFYRAPEI Site 1604
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. --L----TSV V VTLWYRAPEV Site 1604
Monosiga.brevicollis.CDK1 --Y----THE V VTLWYRAPEV Site 1604
Saccharomyces.cerevisiae.SKY1 --Y----TNS I QTREYRSPEV Site 1604
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP --M----TEY V ATRWYRAPEI Site 1604
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U --H----SDI R LNEYKQSP-L Site 1605
Drosophila.melanogaster.GSK3..Protein.kinase.shagg --N----VSY I CSRYYRAPEL Site 1604
Species Residue at Site 2513
in 'msaprobs'
muscle

The residue for every species at site 2513 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -------HTH I ---PYKEGKN Site 1547
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. --V----TEY V ATRWYRAPEV Site 1604
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d --Y----TDY V ATRWYRAPEL Site 1604
Dictyostelium.discoideum.CDK10..Probable.cyclin.de --I----TPC M VTLWYRSPEL Site 1604
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d --Y----TEY V ATRWYRSPEL Site 1604
Ajellomyces.capsulatus.CDK1 --Y----THE V VTLWYRAPEI Site 1604
Dictystelium.discoideum.MAPK3..Extracellular.signa --M----TEY V ATRWYRAPEV Site 1604
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep --L----TSV V VTLWYRAPEV Site 1604
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep --M----TPK V VTLWYRAPEL Site 1604
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac --M----TPY V VTRYYRAPEV Site 1604
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. --M----TGY V VTRWYRAPEV Site 1604
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO --L----TSV V VTLWYRAPEV Site 1604
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri --M----TQE V VTQYYRAPEI Site 1604
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha --M----TPY V VTRYYRAPEV Site 1604
Saccharomyces.cerevisiae.CDK1 --Y----THE I VTLWYRAPEV Site 1604
Lodderomyces.elongisporus.IME2 --Y----TAY V STRWYRLPEI Site 1604
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen --M----TGY V ATRWYRAPEI Site 1604
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un --H----STI V STRHYRAPEV Site 1604
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar --Y----TEY V ATRWYRSPEL Site 1604
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. --N----VSY I CSRYYRAPEL Site 1604
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D --L----TDY V ATRWYRAPEI Site 1604
Homo.sapiens.CLK4..Dual.specificity.protein.kinase --H----STL V STRHYRAPEV Site 1604
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U --C----STY L QSRYYRAPEI Site 1604
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d --Y----TDY V ATRWYRSPEL Site 1604
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen --N----VSY I CSRYYRAPEL Site 1604
Species Residue at Site 2513
in 'msaprobs'
muscle

The residue for every species at site 2513 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 --Y----THE V VTLWYRAPEI Site 1604
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep --L----TPV V VTLWYRAPEV Site 1604
Cryptococcus.neoformans.SSN3..Serine.threonine.pro YGG----DKV V VTIWYRAPEL Site 1604
Salmo.salar.CDK1 --Y----THE V VTLWYRAPEI Site 1604
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d --Y----THQ V VTRWYRSPEL Site 1604
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d --Y----THQ V ATRWYRAPEL Site 1604
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi --K----DSQ V GTVNYMPPEA Site 1604
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen --N----VSY I CSRYYRAPEL Site 1604
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable --WNIRAEED P FRKSWMAPEA Site 1616
Aspergillus.fumigatus.IME2 --Y----TTY V STRWYRAPEV Site 1604
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ADL----DPV V VTFWYRAPEL Site 1604
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha --H----SVV I STRHYRAPEV Site 1604
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha --M----TGY V VTRWYRAPEV Site 1604
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S --M----THE V VTQYYRAPEL Site 1604
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma --C----STY L QSRYYRAPEI Site 1604
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina --L----TEY V ATRWYRAPEI Site 1604
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d --Y----SNE V VTLWYRPPDV Site 1604
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. --M----TPK V VTLWYRAPEL Site 1604
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de --Y----TDC V ATRWYRAPEL Site 1604
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S --M----TPY V VTRYYRAPEV Site 1604
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. --M----TGY V VTRWYRAPEV Site 1604
Candida.glabrata.IME2 --Y----TAY V STRWYRSPEI Site 1604
Homo.sapiens.MAK..Serine.threonine.protein.kinase. --Y----TDY V STRWYRAPEV Site 1604
Schizosaccharomyces.pombe.IME2 --Y----TEY V STRWYRAPEL Site 1604
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P --M----TEY V ATRWYRAPEI Site 1604
Species Residue at Site 2513
in 'msaprobs'
muscle

The residue for every species at site 2513 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl --Y----SAE V VTLWYRPPDV Site 1604
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom --K----EPY I QSRFYRAPEI Site 1604
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -------RQH I ---PYREDKN Site 1547
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d --Y----SNE V VTLWYRPPDV Site 1604
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d --Y----TDY V ATRWYRAPEL Site 1604
Branchiostoma.floridae.CDK1 --Y----THE V VTLWYRAPEI Site 1604
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara --H----STI V STRHYRAPEV Site 1604
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH --N----VSY I CSRYYRAPEL Site 1604
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD --F----TDY V ATRWYRAPEL Site 1604
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR --N----VSY I CSRYYRAPEL Site 1604
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. --M----TPK V VTLWYRAPEL Site 1604
Homo.sapiens.ICK..Serine.threonine.protein.kinase. --Y----TDY V STRWYRAPEV Site 1604
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci --H----TTI V ATRHYRPPEV Site 1604
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos --I----YQY I QSRFYRSPEV Site 1604
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep --Y----THE V VTLWYRAPEI Site 1604
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act --M----TEY V ATRWYRAPEL Site 1604
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. --M----TGY V ATRWYRAPEI Site 1604
Lachancea.thermotolerans.SKY1 --Y----TNS I QTREYRSPEV Site 1604
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a --L----SEG L VTKWYRSPRL Site 1604
Dictyostelium.discoideum.CDK1 --Y----THE I VTLWYRAPEV Site 1604
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. --M----TGY V VTRWYRAPEV Site 1604
Xenopus.tropicalis.IME2 --Y----THE V VTLWYRAPEI Site 1604
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U --C----STY L QSRYYRAPEI Site 1604
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. --Y----NVR V ASRYFKGPEL Site 1604
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d --F----THE V VTLWYRAPEI Site 1604
Species Residue at Site 2513
in 'msaprobs'
muscle

The residue for every species at site 2513 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara --Y----THE V VTLWYRAPEI Site 1604
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. --Y----SSE V VTLWYRPPDA Site 1604
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD --L----TEY V ATRWYRAPEI Site 1604
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos --I----YQY I QSRFYRSPEV Site 1604
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen --N----VSY I CSRYYRAPEL Site 1604
Drosophila.melanogaster.GSK3H..Putative.glycogen.s --N----VSY I CSRYYRAPEL Site 1604
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD --S----TPK V VTLWYRAPEV Site 1604
Encephalitozoon.cuniculi.CDK1 --Y----TTE V VTLWYRPPEL Site 1604
Saccharomyces.kluyveri.IME2 --Y----TAY V STRWYRSPEI Site 1604
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci --H----STL V STRHYRAPEV Site 1604
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a --L----TEY V ATRWYRAPEI Site 1604
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. --Y----SSE V VTLWYRPPDA Site 1604
Cryptococcus.neoformans.IME2 --Y----TEY V STRWYRAPEV Site 1604
Homo.sapiens.HIPK4..Homeodomain.interacting.protei --K----EPY I QSRFYRAPEI Site 1604
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote --F----TED I QTRQYRSLEV Site 1604
Candida.lusitaniae.IME2 --L----TPY V STRWYRAPEI Site 1604
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom --C----STY L QSRYYRAPEI Site 1604
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ADL----DPV V VTFWYRAPEL Site 1604
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep --Y----SHQ V ATRWYRAPEL Site 1604
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. --Y----TDY V ATRWYRAPEL Site 1604
Gallus.gallus.CDK2 --Y----THE V VTLWYRAPEI Site 1604
Emericella.nidulans.CDK1 --Y----THE V VTLWYRSPEI Site 1604
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. --Y----TEY I STRWYRAPEC Site 1604
Homo.sapiens.CDK1 --Y----THE V VTLWYRSPEV Site 1604
Candida.albicans.CDK1 --Y----THE V VTLWYRAPEI Site 1604
Species Residue at Site 2513
in 'msaprobs'
muscle

The residue for every species at site 2513 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca --Y----NVR V ASRYFKGPEL Site 1604
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a --M----TEY V ATRWYRAPEL Site 1604
Mus.musculus.ICK..Serine.threonine.protein.kinase. --Y----TDY V STRWYRAPEV Site 1604
Saccharomyces.castelli.IME2 --Y----TAY V STRWYRSPEI Site 1604
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec --H----TSV V STRHYRAPEV Site 1604
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep --Y----THQ V VTRWYRAPEL Site 1604
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. --Y----SNE V VTLWYRPPDV Site 1604
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly --N----ISY I CSRYYRAPEL Site 1604
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS --R----ANR A GTRGFRAPEV Site 1604
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli --Y----THQ V VTRWYRAPEL Site 1604
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho --Y----TNR V VTLWYRPPEL Site 1604
Homo.sapiens.HIPK2..Homeodomain.interacting.protei --C----STY L QSRYYRAPEI Site 1604
Acyrthosiphon.pisum.CDK1 --Y----THE V ITLWYRAPEI Site 1604
Candida.tropicalis.CDK1 --Y----TAY V STRWYRSPEI Site 1604
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ADL----DPV V VTFWYRAPEL Site 1604
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G --N----VSY I CSRYYRAPEL Site 1604
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR --Y----NVR V ASRYFKGPEL Site 1604
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de --Y----SNE V VTLWYRPPDI Site 1604
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 --Y----NVR V ASRYFKGPEL Site 1604
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d --Y----SNE V VTLWYRPPDV Site 1604
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA --M----TGY V VTRWYRAPEV Site 1604
Candida.albicans.SSN3..Serine.threonine.protein.ki YTG----DKV V VTIWYRAPEL Site 1604
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF --Y----TEY I STRWYRAPEC Site 1604
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA --N----VSY I CSRYYRAPEL Site 1604
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara --M----TGY V VTRWYRAPEV Site 1604
Species Residue at Site 2513
in 'msaprobs'
muscle

The residue for every species at site 2513 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de --Y----TGC V VTRWYRSPEL Site 1604
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei --Y----NVR V ASRYFKGPEL Site 1604
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U --C----STY L QSRYYRAPEV Site 1604
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d --Y----TPV V VTLWYRAPEL Site 1604
Candida.dubliniensis.IME2 --Y----TAY V STRWYRSPEI Site 1604
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a --M----TPY V VTRYYRAPEV Site 1604
Aspergillus.niger.IME2 --Y----TTY V STRWYRAPEV Site 1604
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge --M----TGY V ATRWYRAPEI Site 1604
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d --Y----TDY V ATRWYRAPEL Site 1604
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. --Y----SNE V VTLWYRPPDV Site 1604
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein --Y----NVR V ASRYFKGPEL Site 1604
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty --I----YQY I QSRFYRSPEV Site 1604
Schizosaccharomyces.japonicus.IME2 --Y----TEY I STRWYRAPEL Site 1604
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. --M----TPY V VTRYYRAPEV Site 1604
Gallus.gallus.CDK1 --Y----THE V VTLWYRSPEV Site 1604
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep --Y----SAE V VTLWYRPPDV Site 1604
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P --N----VSY I CSRYYRAPEL Site 1604
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE --F----TTC V VTLWYRAPEV Site 1604
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. --N----VSY I CSRYYRAPEL Site 1604
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. --M----TGY V VTRWYRAPEV Site 1604
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ --Y----NVR V ASRYHKGPEL Site 1604
Kluyveromyces.waltii.IME2 --Y----TAY V STRWYRSPEI Site 1604
Debaryomyces.hansenii.SKY1 --F----TDE I QTRQYRSPEV Site 1604
Saccharomyces.cerevisiae.IME2 --Y----TAY V STRWYRSPEI Site 1604
Schizosaccharomyces.japonicus.b.IME2 --F----TEY V STRWYRAPEL Site 1604
Species Residue at Site 2513
in 'msaprobs'
muscle

The residue for every species at site 2513 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un --L----TSV V VTLWYRAPEV Site 1604
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein --Y----NVR V ASRYFKGPEL Site 1604
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a --L----SEG L VTKWYRSPRL Site 1604
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep --L----TSV V VTLWYRAPEV Site 1604
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST --N----VSY I CSRYYRAPEL Site 1604
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk --M----TGY V VTRWYRAPEV Site 1604
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de --Y----TDY V ATRWYRAPEL Site 1604
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act --M----TPY V VTRYYRAPEV Site 1604
Candida.albicans.IME2 --Y----TAY V STRWYRSPEI Site 1604
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d --L----TPV V VTLWYRAPEV Site 1604
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k --L----SKG V VTLWYRAPEL Site 1604
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. --M----TGY V ATRWYRAPEI Site 1604
Kluyveromyces.lactis.IME2 --Y----TTY V STRWYRSPEI Site 1604
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina --M----TEY V ATRWYRAPEL Site 1604
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. --M----TPY V VTRYYRAPEV Site 1604
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. --M----TGY V ATRWYRAPEI Site 1604
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -------RHH I ---VYREDKN Site 1540
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. --M----TGY V ATRWYRAPEI Site 1604
Amphimedon.queenslandica.CDK1 --Y----THE V VTLWYRSPEL Site 1604
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d --Y----TDY V ATRWYRAPEL Site 1604
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U --Y----THE V VTLWYRAPEI Site 1604
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME --Y----TSL V VTLWYRAPEL Site 1604
Neurospora.crassa.IME2 --Y----TTY V STRWYRAPEV Site 1604
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME --Y----SAE V VTLWYRPPDV Site 1604
Dictyostelium.discoideum.DYRK2..Probable.serine.th --I----FTY I QSRFYRSPEV Site 1604
Species Residue at Site 2513
in 'msaprobs'
muscle

The residue for every species at site 2513 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep --L----TPV V VTLWYRAPEV Site 1604
Hydra.magnipapillata.CDK1 --Y----THE V VTLWYRAPEI Site 1604
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar --M----TPK V VTLWYRAPEL Site 1604
Ashbya.gossypii.IME2 --Y----TAY V STRWYRSPEI Site 1604
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi --K----DSQ V GTVNYMAPEA Site 1604
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos --L----YTY I QSRFYRAPEI Site 1604
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p --N----VSY I CSRYYRAPEL Site 1604
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace --L----TEY V ATRWYRAPEI Site 1604
Schizosaccharomyces.pombe.b.IME2 --L----TEY V STRWYRAPEL Site 1604
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a --L----TEY V ATRWYRAPEI Site 1604
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom --C----STY L QSRYYRAPEI Site 1604
Schizosaccharomyces.pombe.CDK1 --Y----THE I VTLWYRAPEV Site 1604
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch --H----STI V STRHYRAPEV Site 1604
Saccoglossus.kowalevskii.CDK1 --Y----TH- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -------HQH I ---PYRENKN Site 1547
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac --M----TPY V VTRYYRAPEV Site 1604
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep --Y----THE V VTLWYRAPEI Site 1604
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable --WNVRAEED P CQKSWMAPEA Site 1604
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep --Y----THE V VTLWYRAPEI Site 1604
Yarrowia.lipolytica.IME2 --Y----TAY V STRWYRAPEI Site 1604
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil YTG----DKV V VTIWYRAPEL Site 1604
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli --Y----THE V VTLWYRAPEI Site 1604
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K --R----ANR A GTRGFRAPEV Site 1604
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly --N----VSY I CSRYYRAPEL Site 1604
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk --N----VSY I CSRYYRAPEL Site 1604
Species Residue at Site 2513
in 'msaprobs'
muscle

The residue for every species at site 2513 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro --I----YQY I QSRFYRSPEV Site 1604
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo --M----TQE V VTQYYRAPEI Site 1604
Scheffersomyces.stipitis.SKY1 --F----TDE I QTRQYRSPEV Site 1604
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep --Y----SAE V VTLWYRPPDV Site 1604

Generated by PhyloBot at 15:32, October 23rd 2019
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