cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 2313 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2313 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2313 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 2313 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 2313
in 'msaprobs'
muscle

The residue for every species at site 2313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 VKIADFGLAR E I----N-S-- Site 1458
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD AQLVDLGNAC W T----D---- Site 1456
Danio.rerio.CDK1 IKLADFGLAR A F----G-V-- Site 1457
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge LKICDFGLAR V T----S-E-- Site 1458
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d LKLADFGLAR A F----G-I-- Site 1458
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK LKLADFGLAR A V----G-L-- Site 1458
Candida.guilliermondii.IME2 VKLADYGLAR H V----E-N-- Site 1458
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ VYIIDYGLAK K Y----R-D-- Site 1456
Chlamydomonas.reinhardtii.LF4 LKLADFGSCR G I----Y-S-- Site 1458
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g LKLCDFGSAK V L----V-P-- Site 1458
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 LFLIDFGLAK K F----R-D-- Site 1456
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 VHLIDFGMAK Q Y----R-D-- Site 1456
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho VKIADMGFAR L F----N-S-- Site 1455
Schizosaccharomyces.octosporus.b.IME2 VKIADFGLAR S S----T-S-- Site 1458
Candida.albicans.MAPK3..Extracellular.signal.regul LKICDFGLAR S I----A-S-- Site 1458
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. LRLIDWGLAE F Y----H-P-- Site 1458
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 IYLIDFGLSK R Y----R-D-- Site 1456
Suberites.domuncula.JNK..Stress.activated.protein. LKILDFGLAR T A----D-Q-- Site 1458
Homo.sapiens.CLK3..Dual.specificity.protein.kinase IRVADFGSAT F D----H---- Site 1456
Aedes.aegypti.CDK1 IKVADFGLGR S F----N-I-- Site 1458
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci IKVVDFGSAT Y D----D---- Site 1455
Homo.sapiens.CLK2..Dual.specificity.protein.kinase VRVVDFGSAT F D----H---- Site 1455
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos VKVIDFGSSC Y E----H---- Site 1456
Homo.sapiens.HIPK1..Homeodomain.interacting.protei VKVIDFGSAS H V----S-K-- Site 1536
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar IKLCDFGFAR M L----T-G-- Site 1455
Species Residue at Site 2313
in 'msaprobs'
muscle

The residue for every species at site 2313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 LKLADFGLAR L A----S-I-- Site 1456
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. LRLIDWGLAE F Y----H-P-- Site 1458
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM LKICDFGLAR I A----D-P-- Site 1458
Strongylocentrotus.purpuratus.CDK1 IKLADFGLAR A F----G-V-- Site 1458
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca VYVIDFGLAK R Y----R-D-- Site 1456
Drosophila.melanogaster.CDK1 IKVADFGLGR S F----G-I-- Site 1458
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 IYIIDFGLAK R Y----K-D-- Site 1455
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. VNLIDFGLAK R Y----R-D-- Site 1456
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH CKVVDFGNAC W A----D---- Site 1456
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d LKLADFGLAR A K----S-V-- Site 1457
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. LKLADFGLAR A K----S-I-- Site 1457
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET LKILDFGLAR T A----G-T-- Site 1458
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 VKLCDFGFAR T L----A-A-- Site 1458
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U LKILDFGLAR T A----G-T-- Site 1458
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. LKILDFGLAR H A----D-A-- Site 1455
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo LKICDFGLAR V E----E-L-- Site 1456
Bombus.terrestris.CDK1 IKLADFGLAR T F----G-V-- Site 1458
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 VKIADLGNAC W V----H---- Site 1455
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar VKLCDFGFAR T L----A-A-- Site 1458
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. LKILDFGLAR T A----G-T-- Site 1458
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d IKLADFGLAR L Y----N-S-- Site 1455
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. LKLGDFGSCR S V----Y-S-- Site 1458
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. LKLCDFGSAK R L----A-A-- Site 1458
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G LKLCDFGSAK K L----S-P-- Site 1458
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 LFLIDFGLAK K F----R-D-- Site 1458
Species Residue at Site 2313
in 'msaprobs'
muscle

The residue for every species at site 2313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 VYIIDFGLAK K Y----R-D-- Site 1456
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO VKVIDFGSAS H V----S-K-- Site 1456
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C LRLIDWGLAE F Y----H-P-- Site 1458
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl LKICDFGLAR V E----E-L-- Site 1456
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 IKLCDFGFAR L L----A-G-- Site 1455
Homo.sapiens.HIPK3..Homeodomain.interacting.protei VKVIDFGSAS H V----S-K-- Site 1536
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O LKVGDFGLAR E Y----G-S-- Site 1457
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d LKLCDFGFAR N L----S-EG- Site 1456
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci VRVVDFGSAT F D----H---- Site 1456
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O LKVGDFGLAR E Y----G-S-- Site 1457
Naegleria.gruberi.LF4 LKLADFGSCQ G T----K-G-- Site 1458
Saccharomyces.bayanus.IME2 IKLADFGLAR H V----E-N-- Site 1458
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. LRLIDWGLAE F Y----H-P-- Site 1458
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a LKILDFGLAR Q T----D-S-- Site 1456
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki LKLADFGLAR Q Y----G-S-- Site 1458
Dictyostelium.discoideum.DYRK1..Probable.serine.th IKIIDFGSSC H S----N---- Site 1536
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos IKIVDFGSSC Q L----G---- Site 1458
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos IKVIDFGSSC Y E----H---- Site 1456
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d LKLCDFGFAR N L----S-EG- Site 1456
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a VKLCDFGLAR S L----G-D-- Site 1458
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific LKLIDFGIAN Q I----Q-P-- Site 1455
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos VKVIDFGSSC Y E----H---- Site 1536
Aspergillus.nidulans.IME2 VKIADFGLAR E T----H-S-- Site 1458
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi YALVDFGLAQ G T----R-D-- Site 1455
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se LKICDFGLAR T W----D-Q-- Site 1455
Species Residue at Site 2313
in 'msaprobs'
muscle

The residue for every species at site 2313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. VKIADFGLAR E L----R-S-- Site 1458
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep IKLADFGLAR A F----G-V-- Site 1457
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. LKILDFGLAR T A----G-T-- Site 1458
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. VKLCDFGSAK V L----V-K-- Site 1458
Penicillium.marneffei.IME2 VKIADFGLAR E T----H-S-- Site 1458
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen LKILDFGLAR L T----D-D-- Site 1537
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a LKIGDFGLAR I V----D-Q-- Site 1455
Drosophila.melanogaster.MAK IKIADFGLAR E I----R-S-- Site 1458
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH LKICDLGSAS D A----S-E-- Site 1536
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr LKLCDFGSAS H V----A-D-- Site 1458
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de IKLADFGLAR L Y----N-S-- Site 1455
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep VKIGDFGLAR I F----Q-S-- Site 1458
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d VKTADFGLAR A Y----G-V-- Site 1457
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin LKILDFGLAR T A----G-T-- Site 1458
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a LKILDFGLAR T A----C-T-- Site 1458
Homo.sapiens.CLK1..Dual.specificity.protein.kinase IKVVDFGSAT Y D----D---- Site 1537
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis YALVDFGLAQ G T----H-DTK Site 1455
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 LFLIDFGLAK K F----R-D-- Site 1458
Candida.parapsilosis.IME2 IKLGDYGLAR H V----N-T-- Site 1458
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p VKIGDLGLGR L I----R-D-- Site 1455
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen LKLCDFGSAK Q L----V-R-- Site 1458
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. LKILDFGLAR T A----C-T-- Site 1458
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki LRLIDWGLAE F Y----H-P-- Site 1458
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U IKVVDFGSAT F D----D---- Site 1456
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a LKIGDFGLAR I V----D-Q-- Site 1537
Species Residue at Site 2313
in 'msaprobs'
muscle

The residue for every species at site 2313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d LKLADFGLAR A K----S-I-- Site 1457
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. LRLIDWGLAE F Y----H-P-- Site 1458
Yarrowia.lipolytica.SSN3..Serine.threonine.protein LKIGDLGLAR L F----S-N-- Site 1455
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. LKILDFGLAR H A----D-A-- Site 1455
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos IKIVDFGSSC Q L----G---- Site 1536
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE LRLIDWGLAE F Y----H-P-- Site 1458
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH LKLCDFGSAK A L----V-R-- Site 1458
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD LKLCDFGSAK I L----I-K-- Site 1458
Candida.orthopsilosis.IME2 IKLGDYGLAR H V----N-T-- Site 1458
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot LKLADFGLAK A F----G-S-- Site 1457
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str LKILDFGLAR T A----V-E-- Site 1458
Debaryomyces.hansenii.IME2 LKLADYGLAR H I----G-N-- Site 1458
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati LKLCDFGSAK V L----I-K-- Site 1458
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin VKIGDLGLAR K F----Y-N-- Site 1456
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE VKIADFGLAR N F----S-F-- Site 1458
Caenorhabditis.briggsae.CDK1 IKLADFGLAR A I----G-I-- Site 1457
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO LRLIDWGLAE F Y----H-P-- Site 1458
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de LKIADFGLAR V F----S-P-- Site 1456
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos TKVIDFGSSC F E----Y---- Site 1536
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. IKLADFGLAR I Y----S-F-- Site 1458
Monosiga.brevicollis.CDK1 IKLADFGLAR A F----G-I-- Site 1458
Saccharomyces.cerevisiae.SKY1 IKIADLGNAC W Y----D---- Site 1455
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP LKVCDFGLAR S V----A-K-- Site 1458
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U CYFCIFLFQE A S----Q-H-- Site 1456
Drosophila.melanogaster.GSK3..Protein.kinase.shagg LKLCDFGSAK Q L----L-H-- Site 1458
Species Residue at Site 2313
in 'msaprobs'
muscle

The residue for every species at site 2313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas IHIIDFGLAK K Y----R-D-- Site 1456
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. VKLCDFGLAR S L----G-D-- Site 1455
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d VKLCDFGFAR T L----A-A-- Site 1455
Dictyostelium.discoideum.CDK10..Probable.cyclin.de LKLADFGLAR K F----G-Y-- Site 1457
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d LKLCDFGFAR N L----S-EG- Site 1456
Ajellomyces.capsulatus.CDK1 LKLADFGLAR A F----G-V-- Site 1457
Dictystelium.discoideum.MAPK3..Extracellular.signa LKICDLGLAR V E----D-A-- Site 1456
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep IKLADFGLAR I Y----S-F-- Site 1458
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep VKTADFGLAR A Y----G-I-- Site 1457
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac LKILDFGLAR T A----G-T-- Site 1458
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. LKILDFGLAR H T----D-T-- Site 1537
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO LKIADFGLAK T Y----G-S-- Site 1458
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri LKICDFGLAR V E----E-L-- Site 1456
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha LKILDFGLAR T A----G-T-- Site 1458
Saccharomyces.cerevisiae.CDK1 LKLGDFGLAR A F----G-V-- Site 1457
Lodderomyces.elongisporus.IME2 VKLGDYGLAR H I----S-N-- Site 1458
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen LKILDFGLAR H T----D-D-- Site 1537
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un IRVVDFGSAT F D----H---- Site 1456
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar LKLCDFGFAR N L----S-EG- Site 1456
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. LKICDLGSAK Q L----K-P-- Site 1458
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D LKVADFGLAR T L----S-S-- Site 1456
Homo.sapiens.CLK4..Dual.specificity.protein.kinase IKVVDFGSAT Y D----D---- Site 1456
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U VKVIDFGSAS H V----S-K-- Site 1536
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d IKLCDFGFAR L L----T-G-- Site 1534
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen LKLCDFGSAK Q L----V-R-- Site 1458
Species Residue at Site 2313
in 'msaprobs'
muscle

The residue for every species at site 2313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 IKLADFGLAR A I----G-I-- Site 1458
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep VKLADFGLAR I Y----S-Y-- Site 1455
Cryptococcus.neoformans.SSN3..Serine.threonine.pro VKIGDLGLAR L W----H-K-- Site 1456
Salmo.salar.CDK1 IKLADFGLAR A F----G-V-- Site 1457
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d LKLADFGLAK S F----G-S-- Site 1457
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d LKIADFGLAR V F----S-P-- Site 1456
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi LKLIDFGIAN Q M----Q-P-- Site 1538
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen LKLCDFGSAK Q L----V-R-- Site 1458
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable CKLQDLSSNV L M----T-D-- Site 1545
Aspergillus.fumigatus.IME2 VKIADFGLAR E T----H-S-- Site 1458
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan VKIADMGFAR L S----N-S-- Site 1455
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha VRLIDFGTAT F D----Y---- Site 1456
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha LKILDFGLAR H A----D-A-- Site 1455
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S LKICDFGLAR T W----D-S-- Site 1455
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma VKVIDFGSAS H V----S-K-- Site 1536
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina LKICDFGLAR I A----D-P-- Site 1458
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d LKLADFGLAR A K----S-V-- Site 1457
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. VKTADFGLAR A Y----G-V-- Site 1457
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de IKLCDFGFAR I L----T-G-- Site 1455
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S LKILDFGLAR T A----G-T-- Site 1458
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. LKILDFGLAR H A----D-Q-- Site 1456
Candida.glabrata.IME2 VKLADFGLAR H V----E-N-- Site 1458
Homo.sapiens.MAK..Serine.threonine.protein.kinase. VKIADFGLAR E L----R-S-- Site 1458
Schizosaccharomyces.pombe.IME2 VKIADFGLAR E I----N-S-- Site 1458
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P LKVCDFGLAR S I----A-S-- Site 1458
Species Residue at Site 2313
in 'msaprobs'
muscle

The residue for every species at site 2313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl LKLADFGLAR A F----G-I-- Site 1458
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom VKVIDFGSAS I F----S-E-- Site 1536
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. LFLIDFGLAK K Y----R-D-- Site 1455
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d LKLADFGLAR A K----S-V-- Site 1457
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d IKICDFGFAR I L----I-P-- Site 1458
Branchiostoma.floridae.CDK1 IKLADFGLAR A F----G-V-- Site 1458
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara IRVVDFGSAT F D----H---- Site 1455
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH LKLCDFGSAK I L----V-A-- Site 1458
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD AKLCDFGFAR P N----SII-- Site 1456
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR LKLCDFGSAK Y L----V-R-- Site 1458
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. VKIADFGLAR T Y----G-M-- Site 1457
Homo.sapiens.ICK..Serine.threonine.protein.kinase. VKIADFGLAR E I----R-S-- Site 1458
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci IRVADFGSAT F D----H---- Site 1456
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos IKIVDFGSSC Q L----G---- Site 1458
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep IKLADFGLAR A F----G-V-- Site 1457
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act LKIGDFGMAR G L----C-T-- Site 1455
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. LKILDFGLAR H T----D-D-- Site 1537
Lachancea.thermotolerans.SKY1 IKIADLGNAC W Y----D---- Site 1456
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a LKIGDFGLAR I M----D-P-- Site 1458
Dictyostelium.discoideum.CDK1 LKLADFGLAR A V----S-I-- Site 1458
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. LKILDFGLAR Q A----D-S-- Site 1455
Xenopus.tropicalis.IME2 IKLADFGLAR A F----G-V-- Site 1457
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U VKVIDFGSAS H V----S-K-- Site 1536
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. LRLIDWGLAE F Y----H-P-- Site 1458
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d IKLADFGLAR A F----G-V-- Site 1457
Species Residue at Site 2313
in 'msaprobs'
muscle

The residue for every species at site 2313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara IKLADFGLAR A F----G-V-- Site 1458
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. LKLADFGLAR A K----S-I-- Site 1457
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD VKVADFGLAR S I----T-S-- Site 1456
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos IKIVDFGSSC Q L----G---- Site 1536
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen LKLCDFGSAK Q L----V-R-- Site 1458
Drosophila.melanogaster.GSK3H..Putative.glycogen.s LKLCDFGSAK Q L----I-S-- Site 1458
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD LKIADFGLAR S F----G-T-- Site 1457
Encephalitozoon.cuniculi.CDK1 IKLADFGLGR A A----G-I-- Site 1457
Saccharomyces.kluyveri.IME2 VKIADYGLAR H V----T-N-- Site 1458
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci IKVVDFGSAT Y D----D---- Site 1536
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a LKICDFGLAR V A----D-P-- Site 1458
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. LKLADFGLAR A K----S-I-- Site 1457
Cryptococcus.neoformans.IME2 VKLADFGLAR A T----N-S-- Site 1458
Homo.sapiens.HIPK4..Homeodomain.interacting.protei VKVIDFGSAS I F----S-E-- Site 1536
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote VKIADLGNAC W V----H---- Site 1456
Candida.lusitaniae.IME2 LKLCDYGLAK S V----K-N-- Site 1458
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom VKVIDFGSAS H V----S-K-- Site 1536
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A VKIADMGFAR L F----N-A-- Site 1458
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep LKIADFGLAR L F----S-N-- Site 1455
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. IKLCDFGFAT T F----I-G-- Site 1457
Gallus.gallus.CDK2 IKLADFGLAR A F----G-V-- Site 1457
Emericella.nidulans.CDK1 LKLADFGLAR A F----G-V-- Site 1457
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. LKLGDFGSCR S V----Y-S-- Site 1458
Homo.sapiens.CDK1 IKLADFGLAR A F----G-I-- Site 1458
Candida.albicans.CDK1 LKLADFGLAR A F----G-V-- Site 1457
Species Residue at Site 2313
in 'msaprobs'
muscle

The residue for every species at site 2313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca LRLIDWGLAE F Y----H-P-- Site 1458
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a LKIGDFGMAR G L----C-T-- Site 1455
Mus.musculus.ICK..Serine.threonine.protein.kinase. VKIADFGLAR E I----R-S-- Site 1458
Saccharomyces.castelli.IME2 VKLADFGLAR H V----E-N-- Site 1458
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec VKVVDFGNAT Y E----H---- Site 1456
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep LKLADFGLAK S F----G-S-- Site 1457
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. LKLADFGLAR A K----S-V-- Site 1457
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly LKLCDFGSAK I L----V-R-- Site 1458
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS GVLVDFGLAE A QMDYKS---- Site 1455
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli LKLADFGLAK A F----G-S-- Site 1457
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho LKLADFGLAR A F----S-L-- Site 1457
Homo.sapiens.HIPK2..Homeodomain.interacting.protei VKVIDFGSAS H V----S-K-- Site 1536
Acyrthosiphon.pisum.CDK1 IKLADFGLAR A F----S-F-- Site 1458
Candida.tropicalis.CDK1 VKLGDYGLAR H V----S-N-- Site 1458
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin VKIADMGFAR L F----N-A-- Site 1455
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G LKLCDFGSAK V L----V-K-- Site 1458
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR LRLIDWGLAE F Y----H-P-- Site 1458
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de LKLADFGLAR A K----S-I-- Site 1457
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 LRLIDWGLAE F Y----H-P-- Site 1458
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d LKLADFGLAR A K----S-V-- Site 1457
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA LKILDFGLAR H A----D-A-- Site 1537
Candida.albicans.SSN3..Serine.threonine.protein.ki VKIGDLGLAR K F----K-S-- Site 1456
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF LKLADFGSCR G I----Y-S-- Site 1458
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA LKLCDFGSAK V L----V-R-- Site 1458
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara LKILDFGLAR H T----D-A-- Site 1456
Species Residue at Site 2313
in 'msaprobs'
muscle

The residue for every species at site 2313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de LKIADFGLAR V I----T-E-- Site 1456
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei LRLIDWGLAE F Y----H-P-- Site 1458
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U VKVIDFGSAS Y V----S-K-- Site 1536
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d LKVGDFGLAR E Y----G-S-- Site 1457
Candida.dubliniensis.IME2 IKLGDYGLAR H V----S-N-- Site 1458
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a LKILDFGLAR T A----C-T-- Site 1458
Aspergillus.niger.IME2 VKIADFGLAR E T----H-S-- Site 1458
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge LKILDFGLAR H T----D-E-- Site 1537
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d TKLCDFGFAR T L----A-A-- Site 1458
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. LKLADFGLAR A K----S-V-- Site 1457
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein LRLIDWGLAE F Y----H-P-- Site 1458
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty IRVIDFGSSC Q T----G---- Site 1536
Schizosaccharomyces.japonicus.IME2 VKIADFGLAR E L----R-S-- Site 1458
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. LKILDFGLAR T A----I-E-- Site 1458
Gallus.gallus.CDK1 IKLADFGLAR A F----G-I-- Site 1457
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep LKLADFGLAR A F----G-I-- Site 1457
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P LKLCDFGSAK I L----V-E-- Site 1458
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE VKLADFGLSK K Y----T-N-- Site 1456
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. LKLCDFGSAK Y L----V-R-- Site 1458
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. LKILDFGLAR Q A----D-S-- Site 1455
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ LRLIDWGLAE F Y----H-P-- Site 1458
Kluyveromyces.waltii.IME2 VKIADYGLAR H V----T-N-- Site 1458
Debaryomyces.hansenii.SKY1 VKIADLGNAC W T----S---- Site 1455
Saccharomyces.cerevisiae.IME2 IKLADFGLAR H V----E-N-- Site 1458
Schizosaccharomyces.japonicus.b.IME2 LKIADFGLAR P L----H-S-- Site 1456
Species Residue at Site 2313
in 'msaprobs'
muscle

The residue for every species at site 2313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un IKLADFGLAR I Y----S-F-- Site 1455
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein LRLIDWGLAE F Y----H-P-- Site 1458
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a LKIGDFGLAR I M----D-P-- Site 1458
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep IKLADFGLAR I Y----S-F-- Site 1458
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST FKICDFGSAK C L----K-P-- Site 1458
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk LKILDFGLAR H T----D-S-- Site 1455
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de TKLCDFGFAR T L----A-A-- Site 1455
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act LKILDFGLAR T A----A-T-- Site 1458
Candida.albicans.IME2 IKLGDYGLAR H V----S-N-- Site 1458
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d VKLADFGLAR I Y----S-C-- Site 1458
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k LKIADFGLAR E Y----G-S-- Site 1457
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. LKILDFGLAR H T----D-D-- Site 1541
Kluyveromyces.lactis.IME2 VKLADYGLAR H V----N-N-- Site 1458
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina LKIGDFGMAR G L----C-T-- Site 1455
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. LKILDFGLAR T A----G-T-- Site 1458
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. LRILDFGLAR Q A----D-E-- Site 1455
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 LFLIDFGLAK K F----R-D-- Site 1458
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. LRILDFGLAR Q A----D-E-- Site 1455
Amphimedon.queenslandica.CDK1 IKLADFGLAR A F----G-V-- Site 1457
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d IKICDFGFAQ I L----I-P-- Site 1458
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U IKLADFGLAR A F----G-V-- Site 1458
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME LKVGDFGLAR E Y----G-S-- Site 1457
Neurospora.crassa.IME2 VKIADFGLAR E T----H-S-- Site 1458
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME LKLADFGLAR A F----G-I-- Site 1457
Dictyostelium.discoideum.DYRK2..Probable.serine.th IKLIDFGSSC F E----N---- Site 1456
Species Residue at Site 2313
in 'msaprobs'
muscle

The residue for every species at site 2313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep VKLADFGLAR I Y----S-Y-- Site 1458
Hydra.magnipapillata.CDK1 IKLADFGLAR A F----G-L-- Site 1458
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar VKIADFGLAR T Y----G-M-- Site 1457
Ashbya.gossypii.IME2 VKIADYGLAR H V----T-N-- Site 1458
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi LKLIDFGIAN Q M----Q-P-- Site 1538
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos TKVIDFGSSC F E----Y---- Site 1536
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p LKLCDFGSAK Q L----K-P-- Site 1458
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace VKLCDFGLAR S L----Y-Q-- Site 1455
Schizosaccharomyces.pombe.b.IME2 IKLGDFGLAR P S----V-S-- Site 1458
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a LKICDFGLAR V A----D-P-- Site 1458
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom VKVIDFGSAS H V----S-K-- Site 1536
Schizosaccharomyces.pombe.CDK1 LKLADFGLAR S F----G-V-- Site 1458
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch VRVVDFGSAT F D----H---- Site 1456
Saccoglossus.kowalevskii.CDK1 IKLADFGLAR A F----G-V-- Site 1458
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas VYIIDFGLAK K Y----R-D-- Site 1456
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac LKILDFGLAR T A----G-T-- Site 1458
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep IKLADFGLAR A F----G-V-- Site 1458
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable CKLQDMSSQA L M----T-H-- Site 1455
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep IKLADFGLAR A F----G-V-- Site 1458
Yarrowia.lipolytica.IME2 IKIADFGLSR H I----E-D-- Site 1458
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil VKIGDLGLAR K F----H-N-- Site 1456
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli IKLADFGLAR A F----G-V-- Site 1457
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K GVLVDFGLAE E N----E---- Site 1455
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly LKLCDFGSAK I L----V-E-- Site 1458
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk LKLCDFGSAK I L----V-A-- Site 1458
Species Residue at Site 2313
in 'msaprobs'
muscle

The residue for every species at site 2313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro IRVIDFGSSC Q T----G---- Site 1536
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo LKICDFGLAR V E----E-L-- Site 1456
Scheffersomyces.stipitis.SKY1 VKIADLGNAC W T----N---- Site 1456
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep LKLADFGLAR A F----G-I-- Site 1457

Generated by PhyloBot at 15:32, October 23rd 2019
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