cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 2303 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2303 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2303 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 2303 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 2303
in 'msaprobs'
muscle

The residue for every species at site 2303 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 --------YK V KIADFGLARE Site 1445
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD --------PR A QLVDLGNACW Site 1445
Danio.rerio.CDK1 --------GE I KLADFGLARA Site 1445
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge --------CD L KICDFGLARV Site 1445
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d --------GE L KLADFGLARA Site 1445
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK --------GV L KLADFGLARA Site 1445
Candida.guilliermondii.IME2 --------YM V KLADYGLARH Site 1445
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ --------NQ V YIIDYGLAKK Site 1445
Chlamydomonas.reinhardtii.LF4 --------DC L KLADFGSCRG Site 1445
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g --------GI L KLCDFGSAKV Site 1445
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 --------NK L FLIDFGLAKK Site 1445
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 --------NK V HLIDFGMAKQ Site 1445
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho --------GR V KIADMGFARL Site 1445
Schizosaccharomyces.octosporus.b.IME2 --------YS V KIADFGLARS Site 1445
Candida.albicans.MAPK3..Extracellular.signal.regul --------CD L KICDFGLARS Site 1445
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. --------RK L RLIDWGLAEF Site 1445
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 --------ET I YLIDFGLSKR Site 1445
Suberites.domuncula.JNK..Stress.activated.protein. --------CS L KILDFGLART Site 1445
Homo.sapiens.CLK3..Dual.specificity.protein.kinase --------TS I RVADFGSATF Site 1445
Aedes.aegypti.CDK1 --------GL I KVADFGLGRS Site 1445
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci --------PD I KVVDFGSATY Site 1445
Homo.sapiens.CLK2..Dual.specificity.protein.kinase --------TA V RVVDFGSATF Site 1445
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos --------AS V KVIDFGSSCY Site 1445
Homo.sapiens.HIPK1..Homeodomain.interacting.protei --------YR V KVIDFGSASH Site 1445
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar --------SV I KLCDFGFARM Site 1445
Species Residue at Site 2303
in 'msaprobs'
muscle

The residue for every species at site 2303 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 --------GN L KLADFGLARL Site 1445
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. --------KK L RLIDWGLAEF Site 1445
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM --------CD L KICDFGLARI Site 1445
Strongylocentrotus.purpuratus.CDK1 --------GR I KLADFGLARA Site 1445
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca --------NQ V YVIDFGLAKR Site 1445
Drosophila.melanogaster.CDK1 --------GL I KVADFGLGRS Site 1445
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 --------HI I YIIDFGLAKR Site 1445
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. --------HV V NLIDFGLAKR Site 1445
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH --------MR C KVVDFGNACW Site 1445
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d --------GE L KLADFGLARA Site 1445
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. --------GE L KLADFGLARA Site 1445
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET --------CT L KILDFGLART Site 1445
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 --------GV V KLCDFGFART Site 1445
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U --------CT L KILDFGLART Site 1445
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. --------CE L KILDFGLARH Site 1445
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo --------CV L KICDFGLARV Site 1445
Bombus.terrestris.CDK1 --------GH I KLADFGLART Site 1445
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 --------LK V KIADLGNACW Site 1445
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar --------GV V KLCDFGFART Site 1445
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. --------CT L KILDFGLART Site 1445
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d --------GQ I KLADFGLARL Site 1445
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. --------DV L KLGDFGSCRS Site 1445
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. --------GE L KLCDFGSAKR Site 1445
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G --------GT L KLCDFGSAKK Site 1445
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 --------NK L FLIDFGLAKK Site 1445
Species Residue at Site 2303
in 'msaprobs'
muscle

The residue for every species at site 2303 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 --------NQ V YIIDFGLAKK Site 1445
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO --------YR V KVIDFGSASH Site 1445
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C --------RK L RLIDWGLAEF Site 1445
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl --------CV L KICDFGLARV Site 1445
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 --------SV I KLCDFGFARL Site 1445
Homo.sapiens.HIPK3..Homeodomain.interacting.protei --------YR V KVIDFGSASH Site 1445
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O --------GI L KVGDFGLARE Site 1445
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d --------DI L KLCDFGFARN Site 1445
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci --------TA V RVVDFGSATF Site 1445
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O --------GI L KVGDFGLARE Site 1445
Naegleria.gruberi.LF4 --------PT L KLADFGSCQG Site 1445
Saccharomyces.bayanus.IME2 --------YV I KLADFGLARH Site 1445
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. --------KK L RLIDWGLAEF Site 1445
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a --------CE L KILDFGLARQ Site 1445
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki --------GD L KLADFGLARQ Site 1445
Dictyostelium.discoideum.DYRK1..Probable.serine.th --------SA I KIIDFGSSCH Site 1445
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos --------SA I KIVDFGSSCQ Site 1445
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos --------SG I KVIDFGSSCY Site 1445
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d --------DV L KLCDFGFARN Site 1445
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a --------CR V KLCDFGLARS Site 1445
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific --------GS L KLIDFGIANQ Site 1445
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos --------VT V KVIDFGSSCY Site 1445
Aspergillus.nidulans.IME2 --------YT V KIADFGLARE Site 1445
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi --------KK Y ALVDFGLAQG Site 1445
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se --------CI L KICDFGLART Site 1445
Species Residue at Site 2303
in 'msaprobs'
muscle

The residue for every species at site 2303 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. --------EL V KIADFGLARE Site 1445
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep --------GA I KLADFGLARA Site 1445
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. --------CT L KILDFGLART Site 1445
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. --------HQ V KLCDFGSAKV Site 1445
Penicillium.marneffei.IME2 --------YT V KIADFGLARE Site 1445
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen --------CE L KILDFGLARL Site 1445
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a --------LV L KIGDFGLARI Site 1445
Drosophila.melanogaster.MAK --------DL I KIADFGLARE Site 1445
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH --------NI L KICDLGSASD Site 1445
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr --------TI L KLCDFGSASH Site 1445
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de --------GQ I KLADFGLARL Site 1445
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep --------GT V KIGDFGLARI Site 1445
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d --------GC V KTADFGLARA Site 1445
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin --------CT L KILDFGLART Site 1445
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a --------CT L KILDFGLART Site 1445
Homo.sapiens.CLK1..Dual.specificity.protein.kinase --------PD I KVVDFGSATY Site 1445
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis --------KK Y ALVDFGLAQG Site 1445
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 --------NK L FLIDFGLAKK Site 1445
Candida.parapsilosis.IME2 --------FI I KLGDYGLARH Site 1445
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p --------GK V KIGDLGLGRL Site 1445
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen --------AV L KLCDFGSAKQ Site 1445
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. --------CT L KILDFGLART Site 1445
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki --------RK L RLIDWGLAEF Site 1445
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U --------TD I KVVDFGSATF Site 1445
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a --------LV L KIGDFGLARI Site 1445
Species Residue at Site 2303
in 'msaprobs'
muscle

The residue for every species at site 2303 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d --------GE L KLADFGLARA Site 1445
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. --------RK L RLIDWGLAEF Site 1445
Yarrowia.lipolytica.SSN3..Serine.threonine.protein --------GV L KIGDLGLARL Site 1445
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. --------CE L KILDFGLARH Site 1445
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos --------SA I KIVDFGSSCQ Site 1445
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE --------RE L RLIDWGLAEF Site 1445
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH --------QQ L KLCDFGSAKA Site 1445
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD --------ST L KLCDFGSAKI Site 1445
Candida.orthopsilosis.IME2 --------FL I KLGDYGLARH Site 1445
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot --------GV L KLADFGLAKA Site 1445
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str --------CT L KILDFGLART Site 1445
Debaryomyces.hansenii.IME2 --------YV L KLADYGLARH Site 1445
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati --------HQ L KLCDFGSAKV Site 1445
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin --------GC V KIGDLGLARK Site 1445
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE --------GI V KIADFGLARN Site 1445
Caenorhabditis.briggsae.CDK1 --------GA I KLADFGLARA Site 1445
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO --------RK L RLIDWGLAEF Site 1445
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de --------GQ L KIADFGLARV Site 1445
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos --------SA T KVIDFGSSCF Site 1445
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. --------GQ I KLADFGLARI Site 1445
Monosiga.brevicollis.CDK1 --------GI I KLADFGLARA Site 1445
Saccharomyces.cerevisiae.SKY1 --------IQ I KIADLGNACW Site 1445
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP --------CD L KVCDFGLARS Site 1445
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U --------DP C YFCIFLFQEA Site 1445
Drosophila.melanogaster.GSK3..Protein.kinase.shagg --------AV L KLCDFGSAKQ Site 1445
Species Residue at Site 2303
in 'msaprobs'
muscle

The residue for every species at site 2303 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas --------TL I HIIDFGLAKK Site 1445
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. --------CT V KLCDFGLARS Site 1445
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d --------GV V KLCDFGFART Site 1445
Dictyostelium.discoideum.CDK10..Probable.cyclin.de --------GN L KLADFGLARK Site 1445
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d --------DV L KLCDFGFARN Site 1445
Ajellomyces.capsulatus.CDK1 --------GN L KLADFGLARA Site 1445
Dictystelium.discoideum.MAPK3..Extracellular.signa --------CL L KICDLGLARV Site 1445
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep --------GQ I KLADFGLARI Site 1445
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep --------GC V KTADFGLARA Site 1445
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac --------CT L KILDFGLART Site 1445
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. --------CE L KILDFGLARH Site 1445
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO --------GH L KIADFGLAKT Site 1445
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri --------CV L KICDFGLARV Site 1445
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha --------CT L KILDFGLART Site 1445
Saccharomyces.cerevisiae.CDK1 --------GN L KLGDFGLARA Site 1445
Lodderomyces.elongisporus.IME2 --------FI V KLGDYGLARH Site 1445
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen --------CE L KILDFGLARH Site 1445
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un --------TD I RVVDFGSATF Site 1445
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar --------DV L KLCDFGFARN Site 1445
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. --------LL L KICDLGSAKQ Site 1445
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D --------CR L KVADFGLART Site 1445
Homo.sapiens.CLK4..Dual.specificity.protein.kinase --------TD I KVVDFGSATY Site 1445
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U --------YR V KVIDFGSASH Site 1445
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d --------SA I KLCDFGFARL Site 1445
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen --------AV L KLCDFGSAKQ Site 1445
Species Residue at Site 2303
in 'msaprobs'
muscle

The residue for every species at site 2303 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 --------GA I KLADFGLARA Site 1445
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep --------GT V KLADFGLARI Site 1445
Cryptococcus.neoformans.SSN3..Serine.threonine.pro --------GV V KIGDLGLARL Site 1445
Salmo.salar.CDK1 --------GE I KLADFGLARA Site 1445
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d --------GV L KLADFGLAKS Site 1445
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d --------GQ L KIADFGLARV Site 1445
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi --------GM L KLIDFGIANQ Site 1445
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen --------AV L KLCDFGSAKQ Site 1445
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable --------DH C KLQDLSSNVL Site 1445
Aspergillus.fumigatus.IME2 --------YT V KIADFGLARE Site 1445
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan --------GR V KIADMGFARL Site 1445
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha --------TT V RLIDFGTATF Site 1445
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha --------CQ L KILDFGLARH Site 1445
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S --------CI L KICDFGLART Site 1445
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma --------YR V KVIDFGSASH Site 1445
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina --------CD L KICDFGLARI Site 1445
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d --------GE L KLADFGLARA Site 1445
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. --------GC V KTADFGLARA Site 1445
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de --------QV I KLCDFGFARI Site 1445
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S --------CT L KILDFGLART Site 1445
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. --------CE L KILDFGLARH Site 1445
Candida.glabrata.IME2 --------YV V KLADFGLARH Site 1445
Homo.sapiens.MAK..Serine.threonine.protein.kinase. --------EL V KIADFGLARE Site 1445
Schizosaccharomyces.pombe.IME2 --------FN V KIADFGLARE Site 1445
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P --------CD L KVCDFGLARS Site 1445
Species Residue at Site 2303
in 'msaprobs'
muscle

The residue for every species at site 2303 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl --------GE L KLADFGLARA Site 1445
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom --------FR V KVIDFGSASI Site 1445
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. --------NQ L FLIDFGLAKK Site 1445
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d --------GE L KLADFGLARA Site 1445
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d --------GM I KICDFGFARI Site 1445
Branchiostoma.floridae.CDK1 --------GN I KLADFGLARA Site 1445
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara --------TA I RVVDFGSATF Site 1445
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH --------GI L KLCDFGSAKI Site 1445
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD --------GV A KLCDFGFARP Site 1445
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR --------GI L KLCDFGSAKY Site 1445
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. --------GC V KIADFGLART Site 1445
Homo.sapiens.ICK..Serine.threonine.protein.kinase. --------EL V KIADFGLARE Site 1445
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci --------TS I RVADFGSATF Site 1445
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos --------SA I KIVDFGSSCQ Site 1445
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep --------GS I KLADFGLARA Site 1445
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act --------CE L KIGDFGMARG Site 1445
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. --------CE L KILDFGLARH Site 1445
Lachancea.thermotolerans.SKY1 --------IQ I KIADLGNACW Site 1445
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a --------LV L KIGDFGLARI Site 1445
Dictyostelium.discoideum.CDK1 --------GA L KLADFGLARA Site 1445
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. --------CE L KILDFGLARQ Site 1445
Xenopus.tropicalis.IME2 --------GA I KLADFGLARA Site 1445
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U --------YR V KVIDFGSASH Site 1445
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. --------RK L RLIDWGLAEF Site 1445
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d --------GA I KLADFGLARA Site 1445
Species Residue at Site 2303
in 'msaprobs'
muscle

The residue for every species at site 2303 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara --------GA I KLADFGLARA Site 1445
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. --------GE L KLADFGLARA Site 1445
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD --------CL V KVADFGLARS Site 1445
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos --------SA I KIVDFGSSCQ Site 1445
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen --------AV L KLCDFGSAKQ Site 1445
Drosophila.melanogaster.GSK3H..Putative.glycogen.s --------GV L KLCDFGSAKQ Site 1445
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD --------GV L KIADFGLARS Site 1445
Encephalitozoon.cuniculi.CDK1 --------EN I KLADFGLGRA Site 1445
Saccharomyces.kluyveri.IME2 --------YV V KIADYGLARH Site 1445
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci --------TD I KVVDFGSATY Site 1445
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a --------CD L KICDFGLARV Site 1445
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. --------GE L KLADFGLARA Site 1445
Cryptococcus.neoformans.IME2 LAYEKDVSVI V KLADFGLARA Site 1445
Homo.sapiens.HIPK4..Homeodomain.interacting.protei --------FR V KVIDFGSASI Site 1445
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote --------LQ V KIADLGNACW Site 1445
Candida.lusitaniae.IME2 --------FV L KLCDYGLAKS Site 1445
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom --------YR V KVIDFGSASH Site 1445
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A --------GR V KIADMGFARL Site 1445
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep --------GH L KIADFGLARL Site 1445
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. --------GI I KLCDFGFATT Site 1445
Gallus.gallus.CDK2 --------GA I KLADFGLARA Site 1445
Emericella.nidulans.CDK1 --------GN L KLADFGLARA Site 1445
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. --------DV L KLGDFGSCRS Site 1445
Homo.sapiens.CDK1 --------GT I KLADFGLARA Site 1445
Candida.albicans.CDK1 --------GN L KLADFGLARA Site 1445
Species Residue at Site 2303
in 'msaprobs'
muscle

The residue for every species at site 2303 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca --------RK L RLIDWGLAEF Site 1445
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a --------CE L KIGDFGMARG Site 1445
Mus.musculus.ICK..Serine.threonine.protein.kinase. --------EL V KIADFGLARE Site 1445
Saccharomyces.castelli.IME2 --------YV V KLADFGLARH Site 1445
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec --------PD V KVVDFGNATY Site 1445
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep --------GV L KLADFGLAKS Site 1445
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. --------GE L KLADFGLARA Site 1445
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly --------HQ L KLCDFGSAKI Site 1445
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS --------GR G VLVDFGLAEA Site 1445
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli --------GV L KLADFGLAKA Site 1445
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho --------GV L KLADFGLARA Site 1445
Homo.sapiens.HIPK2..Homeodomain.interacting.protei --------YR V KVIDFGSASH Site 1445
Acyrthosiphon.pisum.CDK1 -------GGI I KLADFGLARA Site 1445
Candida.tropicalis.CDK1 --------FI V KLGDYGLARH Site 1445
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin --------GR V KIADMGFARL Site 1445
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G --------GV L KLCDFGSAKV Site 1445
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR --------RK L RLIDWGLAEF Site 1445
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de --------GE L KLADFGLARA Site 1445
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 --------RK L RLIDWGLAEF Site 1445
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d --------GE L KLADFGLARA Site 1445
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA --------CQ L KILDFGLARH Site 1445
Candida.albicans.SSN3..Serine.threonine.protein.ki --------GV V KIGDLGLARK Site 1445
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF --------DC L KLADFGSCRG Site 1445
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA --------AV L KLCDFGSAKV Site 1445
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara --------CE L KILDFGLARH Site 1445
Species Residue at Site 2303
in 'msaprobs'
muscle

The residue for every species at site 2303 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de --------GI L KIADFGLARV Site 1445
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei --------RK L RLIDWGLAEF Site 1445
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U --------YR V KVIDFGSASY Site 1445
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d --------GI L KVGDFGLARE Site 1445
Candida.dubliniensis.IME2 --------FI I KLGDYGLARH Site 1445
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a --------CT L KILDFGLART Site 1445
Aspergillus.niger.IME2 --------YT V KIADFGLARE Site 1445
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge --------CE L KILDFGLARH Site 1445
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d --------GI T KLCDFGFART Site 1445
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. --------GE L KLADFGLARA Site 1445
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein --------RK L RLIDWGLAEF Site 1445
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty --------SQ I RVIDFGSSCQ Site 1445
Schizosaccharomyces.japonicus.IME2 --------YV V KIADFGLARE Site 1445
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. --------CT L KILDFGLART Site 1445
Gallus.gallus.CDK1 --------GV I KLADFGLARA Site 1445
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep --------GE L KLADFGLARA Site 1445
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P --------GI L KLCDFGSAKI Site 1445
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE --------QT V KLADFGLSKK Site 1445
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. --------GV L KLCDFGSAKY Site 1445
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. --------CE L KILDFGLARQ Site 1445
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ --------RK L RLIDWGLAEF Site 1445
Kluyveromyces.waltii.IME2 --------YV V KIADYGLARH Site 1445
Debaryomyces.hansenii.SKY1 --------IS V KIADLGNACW Site 1445
Saccharomyces.cerevisiae.IME2 --------YV I KLADFGLARH Site 1445
Schizosaccharomyces.japonicus.b.IME2 --------YT L KIADFGLARP Site 1445
Species Residue at Site 2303
in 'msaprobs'
muscle

The residue for every species at site 2303 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un --------GQ I KLADFGLARI Site 1445
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein --------KK L RLIDWGLAEF Site 1445
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a --------LV L KIGDFGLARI Site 1445
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep --------GQ I KLADFGLARI Site 1445
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST --------FS F KICDFGSAKC Site 1445
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk --------CE L KILDFGLARH Site 1445
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de --------GI T KLCDFGFART Site 1445
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act --------CT L KILDFGLART Site 1445
Candida.albicans.IME2 --------FI I KLGDYGLARH Site 1445
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d --------GQ V KLADFGLARI Site 1445
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k --------GV L KIADFGLARE Site 1445
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. --------CE L KILDFGLARH Site 1445
Kluyveromyces.lactis.IME2 --------YV V KLADYGLARH Site 1445
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina --------CE L KIGDFGMARG Site 1445
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. --------CT L KILDFGLART Site 1445
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. --------CE L RILDFGLARQ Site 1445
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 --------NK L FLIDFGLAKK Site 1445
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. --------CE L RILDFGLARQ Site 1445
Amphimedon.queenslandica.CDK1 --------GR I KLADFGLARA Site 1445
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d --------GI I KICDFGFAQI Site 1445
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U --------GA I KLADFGLARA Site 1445
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME --------GI L KVGDFGLARE Site 1445
Neurospora.crassa.IME2 --------YT V KIADFGLARE Site 1445
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME --------GE L KLADFGLARA Site 1445
Dictyostelium.discoideum.DYRK2..Probable.serine.th --------SG I KLIDFGSSCF Site 1445
Species Residue at Site 2303
in 'msaprobs'
muscle

The residue for every species at site 2303 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep --------GT V KLADFGLARI Site 1445
Hydra.magnipapillata.CDK1 --------GK I KLADFGLARA Site 1445
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar --------GC V KIADFGLART Site 1445
Ashbya.gossypii.IME2 --------YV V KIADYGLARH Site 1445
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi --------GM L KLIDFGIANQ Site 1445
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos --------SS T KVIDFGSSCF Site 1445
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p --------WS L KLCDFGSAKQ Site 1445
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace --------CF V KLCDFGLARS Site 1445
Schizosaccharomyces.pombe.b.IME2 --------YS I KLGDFGLARP Site 1445
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a --------CD L KICDFGLARV Site 1445
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom --------YR V KVIDFGSASH Site 1445
Schizosaccharomyces.pombe.CDK1 --------GN L KLADFGLARS Site 1445
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch --------TS V RVVDFGSATF Site 1445
Saccoglossus.kowalevskii.CDK1 --------GA I KLADFGLARA Site 1445
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas --------NL V YIIDFGLAKK Site 1445
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac --------CT L KILDFGLART Site 1445
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep --------GA I KLADFGLARA Site 1445
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable --------GY C KLQDMSSQAL Site 1445
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep --------GA I KLADFGLARA Site 1445
Yarrowia.lipolytica.IME2 --------FR I KIADFGLSRH Site 1445
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil --------GC V KIGDLGLARK Site 1445
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli --------GE I KLADFGLARA Site 1445
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K --------GR G VLVDFGLAEE Site 1445
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly --------GV L KLCDFGSAKI Site 1445
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk --------GI L KLCDFGSAKI Site 1445
Species Residue at Site 2303
in 'msaprobs'
muscle

The residue for every species at site 2303 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro --------SQ I RVIDFGSSCQ Site 1445
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo --------CV L KICDFGLARV Site 1445
Scheffersomyces.stipitis.SKY1 --------IS V KIADLGNACW Site 1445
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep --------GE L KLADFGLARA Site 1445

Generated by PhyloBot at 15:34, October 23rd 2019
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