cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1939 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1939 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1939 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1939 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1939
in 'msaprobs'
muscle

The residue for every species at site 1939 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 RDMKPENILV S PIE------- Site 1129
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD TDLKPENVLL E KSF------- Site 1129
Danio.rerio.CDK1 RDLKPQNLLI N A--------- Site 1129
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge RDLKPSNLLL N A--------- Site 1129
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d RDLKPQNLLI N R--------- Site 1129
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK RDLKPQNLLI H E--------- Site 1129
Candida.guilliermondii.IME2 RDIKPQNILI S SMS------- Site 1129
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ RDIKPDNFLM G LGR------- Site 1126
Chlamydomonas.reinhardtii.LF4 RDIKPENILI M D--------- Site 1129
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g RDIKPQNLLV D YK-------- Site 1129
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 RDIKPDNFLM G IGR------- Site 1126
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 RDIKPDNFLI G RPG------- Site 1129
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho RDLKPANILV M GEG------- Site 1126
Schizosaccharomyces.octosporus.b.IME2 RDVKPENILV K KVT------- Site 1122
Candida.albicans.MAPK3..Extracellular.signal.regul RDLKPSNLLL N S--------- Site 1129
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. RDVKPHNVMI D HE-------- Site 1129
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 RDIKPDNFLM G LGK------- Site 1126
Suberites.domuncula.JNK..Stress.activated.protein. RDLKPSNIVV K E--------- Site 1129
Homo.sapiens.CLK3..Dual.specificity.protein.kinase TDLKPENILF V NSE------- Site 1129
Aedes.aegypti.CDK1 RDLKPQNLLI N K--------- Site 1129
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci TDLKPENILF V KSD------- Site 1129
Homo.sapiens.CLK2..Dual.specificity.protein.kinase TDLKPENILF V NSD------- Site 1129
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos CDLKPENIVL Y QKG------- Site 1129
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ADLKPENIML V DPV------- Site 1129
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar RDVKPENILI T K--------- Site 1129
Species Residue at Site 1939
in 'msaprobs'
muscle

The residue for every species at site 1939 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 RDLKPQNLLI D T--------- Site 1129
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. RDVKPHNVMI D HQ-------- Site 1129
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM RDLKPSNLLL N K--------- Site 1129
Strongylocentrotus.purpuratus.CDK1 RDLKPQNLLI D A--------- Site 1129
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca RDIKPDNFLM G LGR------- Site 1126
Drosophila.melanogaster.CDK1 RDLKPQNLLI D K--------- Site 1129
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 RDIKPDNYLI G SGK------- Site 1126
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. RDIKPDNFLM G IGK------- Site 1126
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH SDLKPENILL C ST-------- Site 1122
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d RDLKPQNLLI N E--------- Site 1129
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. RDLKPQNLLI S E--------- Site 1129
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET RDLKPSNIVV K S--------- Site 1129
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 RDIKPENILV S Q--------- Site 1129
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U RDLKPSNIVV K S--------- Site 1129
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. RDLKPGNLAV N E--------- Site 1129
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo RDIKPGNLLV N S--------- Site 1129
Bombus.terrestris.CDK1 RDLKPQNLLI D R--------- Site 1129
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 TDIKPENILL S VNE------- Site 1129
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar RDIKPENILV S Q--------- Site 1129
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. RDLKPSNIVV K S--------- Site 1129
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d RDIKCSNILL N N--------- Site 1129
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. RDVKPENILV K Q--------- Site 1129
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. RDIKPHNVLV D EQ-------- Site 1129
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G RDIKPHNVLV N EA-------- Site 1129
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 RDIKPDNFLM G IGR------- Site 1129
Species Residue at Site 1939
in 'msaprobs'
muscle

The residue for every species at site 1939 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 RDLKPDNFLM G LGR------- Site 1126
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ADLKPENIML V DPV------- Site 1129
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C RDVKPHNVMI D HE-------- Site 1129
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl RDIKPGNLLV N S--------- Site 1129
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 RDVKPENILI T K--------- Site 1129
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ADLKPENIML V DPV------- Site 1129
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O RDLKTSNLLL S H--------- Site 1129
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d RDIKPENLLI S A--------- Site 1129
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci TDLKPENILF V NSD------- Site 1129
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O RDLKTSNLLL S H--------- Site 1129
Naegleria.gruberi.LF4 RDVKPENILV M KITTPPSIPT Site 1126
Saccharomyces.bayanus.IME2 RDLKPENILI T PST------- Site 1129
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. RDVKPHNVMI D HQ-------- Site 1129
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a RDLKPGNLAI N E--------- Site 1129
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki RDLKPNNLLM S I--------- Site 1129
Dictyostelium.discoideum.DYRK1..Probable.serine.th CDLKPENILL R NPK------- Site 1129
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos CDLKPENILL C NPK------- Site 1129
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos CDLKPENILL K QQG------- Site 1129
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d RDIKPENLLI S H--------- Site 1129
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a RDQKPANVLL D S--------- Site 1129
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific SDLKPANFLI V D--------- Site 1129
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos CDLKPENIVL Y QRG------- Site 1129
Aspergillus.nidulans.IME2 RDIKPENILV S TSA------- Site 1129
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi RDVKPSNFLY N RR-------- Site 1129
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se RDIKPGNLLV N S--------- Site 1129
Species Residue at Site 1939
in 'msaprobs'
muscle

The residue for every species at site 1939 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. RDMKPENLLC M G--------- Site 1129
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep RDLKPQNLLI N T--------- Site 1129
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. RDLKPSNIVV K S--------- Site 1129
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. RDIKPQNLLV N PH-------- Site 1129
Penicillium.marneffei.IME2 RDIKPENILV S TSA------- Site 1129
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen RDLKPSNLAV N E--------- Site 1129
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a RDLKPANIFI S TE-------- Site 1129
Drosophila.melanogaster.MAK RDLKPENLLC S G--------- Site 1129
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH SDIKPDNMLV N EK-------- Site 1129
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ADIKPDNILV N ES-------- Site 1129
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de RDIKCSNILL N N--------- Site 1129
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep RDLKPSNILV M GEG------- Site 1126
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d RDLKVSNLLM T D--------- Site 1129
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin RDLKPSNIVV K S--------- Site 1129
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a RDLKPSNIVV K S--------- Site 1129
Homo.sapiens.CLK1..Dual.specificity.protein.kinase TDLKPENILF V QSD------- Site 1129
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis RDVKPSNFLY N RR-------- Site 1129
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 RDIKPDNFLM G IGR------- Site 1129
Candida.parapsilosis.IME2 RDVKPENILV I PTS------- Site 1129
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p RDLKPANIMI T A--------- Site 1129
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen RDIKPQNLLV D PD-------- Site 1129
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. RDLKPSNIVV K S--------- Site 1129
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki RDVKPHNVMI D HE-------- Site 1129
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U TDLKPENILF V ESD------- Site 1129
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a RDLKPANIFI S TE-------- Site 1129
Species Residue at Site 1939
in 'msaprobs'
muscle

The residue for every species at site 1939 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d RDLKPQNLLI N E--------- Site 1129
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. RDVKPHNVMI D HE-------- Site 1129
Yarrowia.lipolytica.SSN3..Serine.threonine.protein RDLKPANTMV T S--------- Site 1129
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. RDLKPGNLAV N E--------- Site 1129
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos CDLKPENILL C NPK------- Site 1128
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE RDVKPHNVMI D AE-------- Site 1129
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH RDIKPQNLLV N PE-------- Site 1129
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD RDIKPQNLLL D TS-------- Site 1129
Candida.orthopsilosis.IME2 RDVKPENILV I PTA------- Site 1129
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot RDLKPNNLLL D E--------- Site 1129
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str RDLKPSNIVV K S--------- Site 1129
Debaryomyces.hansenii.IME2 RDVKPENILI M PTS------- Site 1129
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati RDIKPQNLLV N TE-------- Site 1129
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin RDLKPANIMV T V--------- Site 1129
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE RDLKPQNILV S N--------- Site 1129
Caenorhabditis.briggsae.CDK1 RDLKPQNLLV D E--------- Site 1129
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO RDVKPHNVMI D HE-------- Site 1129
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de RDLKPANLLI S A--------- Site 1129
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos CDLKPENILL K HHG------- Site 1129
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. RDLKPQNILV T S--------- Site 1129
Monosiga.brevicollis.CDK1 RDMKPQNLLI D R--------- Site 1129
Saccharomyces.cerevisiae.SKY1 TDIKPENVLM E IGD------- Site 1129
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP RDLKPSNLLL N A--------- Site 1129
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U RWTTPVNVFL R I--------- Site 1129
Drosophila.melanogaster.GSK3..Protein.kinase.shagg RDIKPQNLLL D PE-------- Site 1129
Species Residue at Site 1939
in 'msaprobs'
muscle

The residue for every species at site 1939 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas RDIKPDNFLI G RGK------- Site 1129
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. RDQKPSNVLL D A--------- Site 1129
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d RDIKPENILV S Q--------- Site 1129
Dictyostelium.discoideum.CDK10..Probable.cyclin.de RDLKCSNLLY G N--------- Site 1129
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d RDIKPENLLI S H--------- Site 1129
Ajellomyces.capsulatus.CDK1 RDLKPQNLLI D R--------- Site 1129
Dictystelium.discoideum.MAPK3..Extracellular.signa RDLKPSNLLI N E--------- Site 1129
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep RDLKPQNILV T S--------- Site 1129
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep RDLKVSNLLM T D--------- Site 1129
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac RDLKPSNIVV K S--------- Site 1129
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. RDLKPGNLAV N E--------- Site 1129
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO RDLKPQNLLV S S--------- Site 1129
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri RDIKPGNLLV N S--------- Site 1129
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha RDLKPSNIVV K S--------- Site 1129
Saccharomyces.cerevisiae.CDK1 RDLKPQNLLI N K--------- Site 1129
Lodderomyces.elongisporus.IME2 RDVKPENILI L PTL------- Site 1129
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen RDLKPSNLAV N E--------- Site 1129
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un TDLKPENILF V SSD------- Site 1129
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar RDIKPENLLI S H--------- Site 1129
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. RDIKPQNILV D PD-------- Site 1129
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D RDLKPSNILI D S--------- Site 1129
Homo.sapiens.CLK4..Dual.specificity.protein.kinase TDLKPENILF V KSD------- Site 1129
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ADLKPENIML V DPS------- Site 1129
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d RDVKPENILI T K--------- Site 1129
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen RDIKPQNLLV D PD-------- Site 1129
Species Residue at Site 1939
in 'msaprobs'
muscle

The residue for every species at site 1939 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 RDLKPQNLLV D N--------- Site 1129
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep RDLKPENILV T S--------- Site 1129
Cryptococcus.neoformans.SSN3..Serine.threonine.pro RDLKPANILV T S--------- Site 1129
Salmo.salar.CDK1 RDLKPQNLLI N A--------- Site 1129
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d RDLKPNNLLL D E--------- Site 1129
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d RDLKPANLLI S A--------- Site 1129
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi SDLKPANFLI V D--------- Site 1129
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen RDIKPQNLLL D PD-------- Site 1129
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable RNLKPSNIIL I S--------- Site 1129
Aspergillus.fumigatus.IME2 RDIKPENILV S TSA------- Site 1129
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan RDLKPANILV M GEG------- Site 1126
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha TDLKPENILF V NSN------- Site 1129
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha RDLKPGNLAV N E--------- Site 1129
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S RDIKPGNLLV N S--------- Site 1129
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ADLKPENIML V DPS------- Site 1129
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina RDLKPSNLLI N T--------- Site 1129
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d RDLKPQNLLI N E--------- Site 1129
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. RDLKVSNLLM T D--------- Site 1129
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de RDVKPENILI T K--------- Site 1129
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S RDLKPSNIVV K A--------- Site 1129
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. RDLKPGNLAV N E--------- Site 1129
Candida.glabrata.IME2 RDLKPENILI T PST------- Site 1129
Homo.sapiens.MAK..Serine.threonine.protein.kinase. RDMKPENLLC M G--------- Site 1129
Schizosaccharomyces.pombe.IME2 RDMKPENILI S SNS------- Site 1129
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P RDLKPSNLLL N S--------- Site 1129
Species Residue at Site 1939
in 'msaprobs'
muscle

The residue for every species at site 1939 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl RDLKPQNLLI N K--------- Site 1129
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ADLKPENIML V DQT------- Site 1129
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. RDIKPDNFLM G IGR------- Site 1409
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d RDLKPQNLLI N E--------- Site 1129
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d RDVKPENILI T K--------- Site 1129
Branchiostoma.floridae.CDK1 RDLKPQNLLI D A--------- Site 1129
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara TDLKPENILF V NSD------- Site 1129
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH RDIKPQNLLL D PE-------- Site 1129
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD RDVKPENILY S K--------- Site 1129
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR RDIKPQNLLI D PE-------- Site 1129
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. RDLKVSNLLM T D--------- Site 1129
Homo.sapiens.ICK..Serine.threonine.protein.kinase. RDLKPENLLC M G--------- Site 1129
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci TDLKPENILF V NSE------- Site 1129
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos CDLKPENILL C NPK------- Site 1129
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep RDLKPQNLLI N A--------- Site 1129
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act RDLKPSNLLV N E--------- Site 1129
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. RDLKPSNLAV N E--------- Site 1129
Lachancea.thermotolerans.SKY1 TDIKPENVLM D VG-------- Site 1126
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a RDLKPANLFI N TE-------- Site 1129
Dictyostelium.discoideum.CDK1 RDLKPQNLLI D R--------- Site 1129
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. RDLKPGNLAV N E--------- Site 1129
Xenopus.tropicalis.IME2 RDLKPQNLLI N S--------- Site 1129
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ADLKPENIML V DPV------- Site 1129
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. RDVKPHNVMI D HE-------- Site 1129
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d RDLKPQNLLI N S--------- Site 1129
Species Residue at Site 1939
in 'msaprobs'
muscle

The residue for every species at site 1939 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara RDLKPQNLLI N E--------- Site 1129
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. RDLKPQNLLL S H--------- Site 1129
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD RDIKPSNLLL N S--------- Site 1129
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos CDLKPENILL C NPK------- Site 1128
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen RDIKPQNLLL D PD-------- Site 1129
Drosophila.melanogaster.GSK3H..Putative.glycogen.s RDIKPQNMLL D SE-------- Site 1129
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD RDLKVSNLLL T D--------- Site 1129
Encephalitozoon.cuniculi.CDK1 RDLKPQNILV D P--------- Site 1129
Saccharomyces.kluyveri.IME2 RDIKPENILI S PAN------- Site 1129
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci TDLKPENILF V KSD------- Site 1129
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a RDLKPSNLLL N T--------- Site 1129
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. RDLKPQNLLI S H--------- Site 1129
Cryptococcus.neoformans.IME2 RDMKPENLLI T T--------- Site 1129
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ADLKPENIML V DQT------- Site 1129
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote TDIKPENILL S VNE------- Site 1129
Candida.lusitaniae.IME2 RDVKPENILV T STQ------- Site 1129
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ADLKPENIML V DPV------- Site 1129
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A RDLKPANILV M GEG------- Site 1126
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep RDLKPANLLI S S--------- Site 1129
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. RDVKPENILI T K--------- Site 1129
Gallus.gallus.CDK2 RDLKPQNLLI N A--------- Site 1129
Emericella.nidulans.CDK1 RDLKPQNLLI D R--------- Site 1129
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. RDVKPENILI K Q--------- Site 1129
Homo.sapiens.CDK1 RDLKPQNLLI D D--------- Site 1129
Candida.albicans.CDK1 RDLKPQNLLI D K--------- Site 1129
Species Residue at Site 1939
in 'msaprobs'
muscle

The residue for every species at site 1939 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca RDVKPHNVMI D HE-------- Site 1129
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a RDLKPSNLLV N E--------- Site 1129
Mus.musculus.ICK..Serine.threonine.protein.kinase. RDLKPENLLC M G--------- Site 1129
Saccharomyces.castelli.IME2 RDIKPENILV S PNK------- Site 1129
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec TDLKPENILF V DSE------- Site 1129
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep RDLKPNNLLL D E--------- Site 1129
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. RDLKPQNLLI S D--------- Site 1129
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly RDIKPQNLLV D TR-------- Site 1129
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS RDIKPTNFLF N LE-------- Site 1129
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli RDLKPNNLLL D E--------- Site 1129
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho RDMKAANVLI T R--------- Site 1129
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ADLKPENIML V DPS------- Site 1129
Acyrthosiphon.pisum.CDK1 RDLKPQNLLV N T--------- Site 1129
Candida.tropicalis.CDK1 RDVKPENILV I PTL------- Site 1129
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin RDLKPANILV M GDG------- Site 1126
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G RDIKPQNLLL D PS-------- Site 1129
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR RDVKPHNVMI D HD-------- Site 1129
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de RDLKPQNLLI N E--------- Site 1129
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 RDVKPHNVMI D HE-------- Site 1129
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d RDLKPQNLLI N E--------- Site 1129
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA RDLKPGNLAV N E--------- Site 1129
Candida.albicans.SSN3..Serine.threonine.protein.ki RDLKPANIMV S S--------- Site 1129
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF RDIKPENILI M D--------- Site 1129
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA RDIKPQNLLL N PE-------- Site 1129
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara RDLKPGNLAV N Q--------- Site 1129
Species Residue at Site 1939
in 'msaprobs'
muscle

The residue for every species at site 1939 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de RDLKAANLLI D N--------- Site 1129
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei RDVKPHNVMI D HE-------- Site 1129
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ADLKPENIML V DPV------- Site 1129
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d RDLKTSNLLL S H--------- Site 1129
Candida.dubliniensis.IME2 RDVKPENILV I PTL------- Site 1129
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a RDLKPSNIVV K S--------- Site 1129
Aspergillus.niger.IME2 RDIKPENILV S TSA------- Site 1129
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge RDLKPSNLAV N E--------- Site 1129
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d RDIKPENILV S Q--------- Site 1129
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. RDLKPQNLLI S D--------- Site 1129
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein RDVKPHNVMI D HE-------- Site 1129
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty CDLKPENVLL V NAK------- Site 1129
Schizosaccharomyces.japonicus.IME2 RDMKPENILI S EFP------- Site 1129
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. RDLKPSNIVV R S--------- Site 1129
Gallus.gallus.CDK1 RDLKPQNLLI D D--------- Site 1129
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep RDLKPQNLLI N R--------- Site 1129
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P RDIKPQNLLL D PT-------- Site 1129
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE RDLKPQNILV N R--------- Site 1129
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. RDIKPQNLLI D PE-------- Site 1129
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. RDLKPGNLAV N E--------- Site 1129
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ RDVKPQNVMI D PT-------- Site 1129
Kluyveromyces.waltii.IME2 RDLKPENILI S PSN------- Site 1129
Debaryomyces.hansenii.SKY1 TDLKPENVLI E IGD------- Site 1129
Saccharomyces.cerevisiae.IME2 RDLKPENILI T PST------- Site 1129
Schizosaccharomyces.japonicus.b.IME2 RDIKPENILI K NKA------- Site 1219
Species Residue at Site 1939
in 'msaprobs'
muscle

The residue for every species at site 1939 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un RDLKPQNILV T S--------- Site 1129
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein RDVKPHNVMI D HQ-------- Site 1129
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a RDLKPANLFI N TE-------- Site 1129
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep RDLKPQNILV T S--------- Site 1129
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST RDIKPQNLLV D PT-------- Site 1129
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk RDLKPGNLAV N E--------- Site 1129
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de RDIKPENILV S Q--------- Site 1129
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act RDLKPSNIVV K S--------- Site 1129
Candida.albicans.IME2 RDVKPENILV I PTL------- Site 1129
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d RDLKPENILV T S--------- Site 1129
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k RDLKTANLLY T N--------- Site 1129
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. RDLKPSNLAV N E--------- Site 1129
Kluyveromyces.lactis.IME2 RDIKPENILI S PSH------- Site 1129
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina RDLKPSNLLV N E--------- Site 1129
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. RDLKPSNIVV K S--------- Site 1129
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. RDLKPSNVAV N E--------- Site 1129
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 RDIKPDNFLM G IGR------- Site 1129
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. RDLKPSNVAV N E--------- Site 1129
Amphimedon.queenslandica.CDK1 RDLKPQNLLI S S--------- Site 1129
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d RDIKPENILI T K--------- Site 1129
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U RDLKPQNLLI N E--------- Site 1129
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME RDLKTSNLLL S H--------- Site 1129
Neurospora.crassa.IME2 RDIKPENILV S TSS------- Site 1129
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME RDLKPQNLLI N K--------- Site 1129
Dictyostelium.discoideum.DYRK2..Probable.serine.th ADLKPENILL K SPT------- Site 1129
Species Residue at Site 1939
in 'msaprobs'
muscle

The residue for every species at site 1939 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep RDLKPENILV T S--------- Site 1129
Hydra.magnipapillata.CDK1 RDLKPQNLLI D T--------- Site 1129
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar RDLKVFNLLM T D--------- Site 1129
Ashbya.gossypii.IME2 RDIKPENILI S PAN------- Site 1129
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi SDLKPANFVI V D--------- Site 1131
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos CDLKPENILL K HHG------- Site 1129
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p RDIKPQNLLV D PE-------- Site 1129
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace RDQKPSNILL D S--------- Site 1129
Schizosaccharomyces.pombe.b.IME2 RDIKPENILV K RIS------- Site 1126
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a RDLKPSNLLL N T--------- Site 1129
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ADLKPENIML V DPV------- Site 1224
Schizosaccharomyces.pombe.CDK1 RDLKPQNLLI D K--------- Site 1129
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch TDLKPENILF V NSD------- Site 1129
Saccoglossus.kowalevskii.CDK1 RDLKPQNLLI D S--------- Site 1129
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas RDVKPDNFLM G LGK------- Site 1126
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac RDLKPSNIVV K S--------- Site 1129
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep RDLKPQNLLL D G--------- Site 1129
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable RNLKPSNIVL V N--------- Site 1129
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep RDLKPQNLLI N E--------- Site 1129
Yarrowia.lipolytica.IME2 RDIKPENILV S RYL------- Site 1129
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil RDLKPANIMV T I--------- Site 1129
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli RDLKPQNLLI N A--------- Site 1129
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K RDVKPTNFLY N PI-------- Site 1129
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly RDIKPQNLLL D PT-------- Site 1129
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk RDIKPQNLLL D PE-------- Site 1129
Species Residue at Site 1939
in 'msaprobs'
muscle

The residue for every species at site 1939 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro CDLKPENVLL V NAK------- Site 1129
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo RDIKPGNLLV N S--------- Site 1129
Scheffersomyces.stipitis.SKY1 TDLKPENVLI E IGD------- Site 1126
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep RDLKPQNLLI N R--------- Site 1129

Generated by PhyloBot at 15:39, October 23rd 2019
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