cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 1937 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1937 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1937 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1937 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1937
in 'msaprobs'
muscle

The residue for every species at site 1937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 FHRDMKPENI L VSPIE----- Site 1120
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD IHTDLKPENV L LEKSF----- Site 1120
Danio.rerio.CDK1 LHRDLKPQNL L INA------- Site 1120
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge LHRDLKPSNL L LNA------- Site 1120
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d LHRDLKPQNL L INR------- Site 1120
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK LHRDLKPQNL L IHE------- Site 1120
Candida.guilliermondii.IME2 FHRDIKPQNI L ISSMS----- Site 1120
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ LHRDIKPDNF L MGLGR----- Site 1120
Chlamydomonas.reinhardtii.LF4 FHRDIKPENI L IMD------- Site 1120
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g CHRDIKPQNL L VDYK------ Site 1120
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 IHRDIKPDNF L MGIGR----- Site 1120
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 IYRDIKPDNF L IGRPG----- Site 1120
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho LHRDLKPANI L VMGEG----- Site 1120
Schizosaccharomyces.octosporus.b.IME2 MHRDVKPENI L VKKVT----- Site 1120
Candida.albicans.MAPK3..Extracellular.signal.regul LHRDLKPSNL L LNS------- Site 1120
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. MHRDVKPHNV M IDHE------ Site 1120
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 IHRDIKPDNF L MGLGK----- Site 1120
Suberites.domuncula.JNK..Stress.activated.protein. IHRDLKPSNI V VKE------- Site 1120
Homo.sapiens.CLK3..Dual.specificity.protein.kinase THTDLKPENI L FVNSE----- Site 1120
Aedes.aegypti.CDK1 LHRDLKPQNL L INK------- Site 1120
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci THTDLKPENI L FVKSD----- Site 1120
Homo.sapiens.CLK2..Dual.specificity.protein.kinase THTDLKPENI L FVNSD----- Site 1120
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos IHCDLKPENI V LYQKG----- Site 1120
Homo.sapiens.HIPK1..Homeodomain.interacting.protei IHADLKPENI M LVDPV----- Site 1120
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar IHRDVKPENI L ITK------- Site 1120
Species Residue at Site 1937
in 'msaprobs'
muscle

The residue for every species at site 1937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 FHRDLKPQNL L IDT------- Site 1120
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. MHRDVKPHNV M IDHQ------ Site 1120
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM LHRDLKPSNL L LNK------- Site 1120
Strongylocentrotus.purpuratus.CDK1 LHRDLKPQNL L IDA------- Site 1120
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca LHRDIKPDNF L MGLGR----- Site 1120
Drosophila.melanogaster.CDK1 LHRDLKPQNL L IDK------- Site 1120
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 LHRDIKPDNY L IGSGK----- Site 1120
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. IHRDIKPDNF L MGIGK----- Site 1120
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH IHSDLKPENI L LCST------ Site 1120
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d LHRDLKPQNL L INE------- Site 1120
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. LHRDLKPQNL L ISE------- Site 1120
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET IHRDLKPSNI V VKS------- Site 1120
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 IHRDIKPENI L VSQ------- Site 1120
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U IHRDLKPSNI V VKS------- Site 1120
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. VHRDLKPGNL A VNE------- Site 1120
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo LHRDIKPGNL L VNS------- Site 1120
Bombus.terrestris.CDK1 LHRDLKPQNL L IDR------- Site 1120
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 IHTDIKPENI L LSVNE----- Site 1120
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar IHRDIKPENI L VSQ------- Site 1120
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. IHRDLKPSNI V VKS------- Site 1120
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d LHRDIKCSNI L LNN------- Site 1120
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. FHRDVKPENI L VKQ------- Site 1120
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. CHRDIKPHNV L VDEQ------ Site 1120
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G CHRDIKPHNV L VNEA------ Site 1120
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 IHRDIKPDNF L MGIGR----- Site 1120
Species Residue at Site 1937
in 'msaprobs'
muscle

The residue for every species at site 1937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 LHRDLKPDNF L MGLGR----- Site 1120
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO IHADLKPENI M LVDPV----- Site 1120
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C MHRDVKPHNV M IDHE------ Site 1120
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl LHRDIKPGNL L VNS------- Site 1120
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 IHRDVKPENI L ITK------- Site 1120
Homo.sapiens.HIPK3..Homeodomain.interacting.protei IHADLKPENI M LVDPV----- Site 1120
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O LHRDLKTSNL L LSH------- Site 1120
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d VHRDIKPENL L ISA------- Site 1120
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci THTDLKPENI L FVNSD----- Site 1120
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O LHRDLKTSNL L LSH------- Site 1120
Naegleria.gruberi.LF4 FHRDVKPENI L VMKITTPPSI Site 1120
Saccharomyces.bayanus.IME2 FHRDLKPENI L ITPST----- Site 1120
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. MHRDVKPHNV M IDHQ------ Site 1120
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a IHRDLKPGNL A INE------- Site 1120
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki LHRDLKPNNL L MSI------- Site 1120
Dictyostelium.discoideum.DYRK1..Probable.serine.th IHCDLKPENI L LRNPK----- Site 1120
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos IHCDLKPENI L LCNPK----- Site 1120
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos IHCDLKPENI L LKQQG----- Site 1120
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d VHRDIKPENL L ISH------- Site 1120
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a IHRDQKPANV L LDS------- Site 1120
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific VHSDLKPANF L IVD------- Site 1120
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos IHCDLKPENI V LYQRG----- Site 1120
Aspergillus.nidulans.IME2 FHRDIKPENI L VSTSA----- Site 1120
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi VHRDVKPSNF L YNRR------ Site 1120
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se LHRDIKPGNL L VNS------- Site 1120
Species Residue at Site 1937
in 'msaprobs'
muscle

The residue for every species at site 1937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. FHRDMKPENL L CMG------- Site 1120
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep LHRDLKPQNL L INT------- Site 1120
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. IHRDLKPSNI V VKS------- Site 1120
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. CHRDIKPQNL L VNPH------ Site 1120
Penicillium.marneffei.IME2 FHRDIKPENI L VSTSA----- Site 1120
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen IHRDLKPSNL A VNE------- Site 1120
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a LHRDLKPANI F ISTE------ Site 1120
Drosophila.melanogaster.MAK FHRDLKPENL L CSG------- Site 1120
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH IHSDIKPDNM L VNEK------ Site 1120
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr LHADIKPDNI L VNES------ Site 1120
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de LHRDIKCSNI L LNN------- Site 1120
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep IHRDLKPSNI L VMGEG----- Site 1120
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d IHRDLKVSNL L MTD------- Site 1120
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin IHRDLKPSNI V VKS------- Site 1120
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a IHRDLKPSNI V VKS------- Site 1120
Homo.sapiens.CLK1..Dual.specificity.protein.kinase THTDLKPENI L FVQSD----- Site 1120
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis VHRDVKPSNF L YNRR------ Site 1120
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 IHRDIKPDNF L MGIGR----- Site 1120
Candida.parapsilosis.IME2 FHRDVKPENI L VIPTS----- Site 1120
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p MHRDLKPANI M ITA------- Site 1120
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen CHRDIKPQNL L VDPD------ Site 1120
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. IHRDLKPSNI V VKS------- Site 1120
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki MHRDVKPHNV M IDHE------ Site 1120
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U THTDLKPENI L FVESD----- Site 1120
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a LHRDLKPANI F ISTE------ Site 1120
Species Residue at Site 1937
in 'msaprobs'
muscle

The residue for every species at site 1937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d LHRDLKPQNL L INE------- Site 1120
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. MHRDVKPHNV M IDHE------ Site 1120
Yarrowia.lipolytica.SSN3..Serine.threonine.protein LHRDLKPANT M VTS------- Site 1120
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. IHRDLKPGNL A VNE------- Site 1120
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos IHCDLKPENI L LCNPK----- Site 1120
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE MHRDVKPHNV M IDAE------ Site 1120
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH CHRDIKPQNL L VNPE------ Site 1120
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD CHRDIKPQNL L LDTS------ Site 1120
Candida.orthopsilosis.IME2 FHRDVKPENI L VIPTA----- Site 1120
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot LHRDLKPNNL L LDE------- Site 1120
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str IHRDLKPSNI V VKS------- Site 1120
Debaryomyces.hansenii.IME2 FHRDVKPENI L IMPTS----- Site 1120
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati CHRDIKPQNL L VNTE------ Site 1120
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin LHRDLKPANI M VTV------- Site 1120
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE VHRDLKPQNI L VSN------- Site 1120
Caenorhabditis.briggsae.CDK1 IHRDLKPQNL L VDE------- Site 1120
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO MHRDVKPHNV M IDHE------ Site 1120
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de VHRDLKPANL L ISA------- Site 1120
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos IHCDLKPENI L LKHHG----- Site 1120
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. VHRDLKPQNI L VTS------- Site 1120
Monosiga.brevicollis.CDK1 LHRDMKPQNL L IDR------- Site 1120
Saccharomyces.cerevisiae.SKY1 IHTDIKPENV L MEIGD----- Site 1120
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP LHRDLKPSNL L LNA------- Site 1120
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U VHRWTTPVNV F LRI------- Site 1120
Drosophila.melanogaster.GSK3..Protein.kinase.shagg CHRDIKPQNL L LDPE------ Site 1120
Species Residue at Site 1937
in 'msaprobs'
muscle

The residue for every species at site 1937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas IHRDIKPDNF L IGRGK----- Site 1120
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. VHRDQKPSNV L LDA------- Site 1120
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d IHRDIKPENI L VSQ------- Site 1120
Dictyostelium.discoideum.CDK10..Probable.cyclin.de IHRDLKCSNL L YGN------- Site 1120
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d VHRDIKPENL L ISH------- Site 1120
Ajellomyces.capsulatus.CDK1 LHRDLKPQNL L IDR------- Site 1120
Dictystelium.discoideum.MAPK3..Extracellular.signa LHRDLKPSNL L INE------- Site 1120
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep VHRDLKPQNI L VTS------- Site 1120
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep IHRDLKVSNL L MTD------- Site 1120
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac IHRDLKPSNI V VKS------- Site 1120
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. VHRDLKPGNL A VNE------- Site 1120
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO IHRDLKPQNL L VSS------- Site 1120
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri LHRDIKPGNL L VNS------- Site 1120
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha IHRDLKPSNI V VKS------- Site 1120
Saccharomyces.cerevisiae.CDK1 LHRDLKPQNL L INK------- Site 1120
Lodderomyces.elongisporus.IME2 FHRDVKPENI L ILPTL----- Site 1120
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen IHRDLKPSNL A VNE------- Site 1120
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un THTDLKPENI L FVSSD----- Site 1120
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar VHRDIKPENL L ISH------- Site 1120
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. CHRDIKPQNI L VDPD------ Site 1120
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D IHRDLKPSNI L IDS------- Site 1120
Homo.sapiens.CLK4..Dual.specificity.protein.kinase THTDLKPENI L FVKSD----- Site 1120
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U IHADLKPENI M LVDPS----- Site 1120
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d IHRDVKPENI L ITK------- Site 1120
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen CHRDIKPQNL L VDPD------ Site 1120
Species Residue at Site 1937
in 'msaprobs'
muscle

The residue for every species at site 1937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 IHRDLKPQNL L VDN------- Site 1120
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep VHRDLKPENI L VTS------- Site 1120
Cryptococcus.neoformans.SSN3..Serine.threonine.pro LHRDLKPANI L VTS------- Site 1120
Salmo.salar.CDK1 LHRDLKPQNL L INA------- Site 1120
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d LHRDLKPNNL L LDE------- Site 1120
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d VHRDLKPANL L ISA------- Site 1120
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi VHSDLKPANF L IVD------- Site 1120
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen CHRDIKPQNL L LDPD------ Site 1120
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable IHRNLKPSNI I LIS------- Site 1120
Aspergillus.fumigatus.IME2 FHRDIKPENI L VSTSA----- Site 1120
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan LHRDLKPANI L VMGEG----- Site 1120
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha THTDLKPENI L FVNSN----- Site 1120
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha IHRDLKPGNL A VNE------- Site 1120
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S LHRDIKPGNL L VNS------- Site 1120
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma IHADLKPENI M LVDPS----- Site 1120
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina LHRDLKPSNL L INT------- Site 1120
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d LHRDLKPQNL L INE------- Site 1120
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. IHRDLKVSNL L MTD------- Site 1120
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de IHRDVKPENI L ITK------- Site 1120
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S IHRDLKPSNI V VKA------- Site 1120
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. IHRDLKPGNL A VNE------- Site 1120
Candida.glabrata.IME2 FHRDLKPENI L ITPST----- Site 1120
Homo.sapiens.MAK..Serine.threonine.protein.kinase. FHRDMKPENL L CMG------- Site 1120
Schizosaccharomyces.pombe.IME2 FHRDMKPENI L ISSNS----- Site 1120
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P LHRDLKPSNL L LNS------- Site 1120
Species Residue at Site 1937
in 'msaprobs'
muscle

The residue for every species at site 1937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl LHRDLKPQNL L INK------- Site 1120
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom IHADLKPENI M LVDQT----- Site 1120
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. IHRDIKPDNF L MGIGR----- Site 1120
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d LHRDLKPQNL L INE------- Site 1120
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d IHRDVKPENI L ITK------- Site 1120
Branchiostoma.floridae.CDK1 LHRDLKPQNL L IDA------- Site 1120
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara THTDLKPENI L FVNSD----- Site 1120
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH CHRDIKPQNL L LDPE------ Site 1120
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD IHRDVKPENI L YSK------- Site 1120
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR CHRDIKPQNL L IDPE------ Site 1120
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. IHRDLKVSNL L MTD------- Site 1120
Homo.sapiens.ICK..Serine.threonine.protein.kinase. FHRDLKPENL L CMG------- Site 1120
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci THTDLKPENI L FVNSE----- Site 1120
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos IHCDLKPENI L LCNPK----- Site 1120
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep LHRDLKPQNL L INA------- Site 1120
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act IHRDLKPSNL L VNE------- Site 1120
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. IHRDLKPSNL A VNE------- Site 1120
Lachancea.thermotolerans.SKY1 IHTDIKPENV L MDVG------ Site 1120
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a LHRDLKPANL F INTE------ Site 1120
Dictyostelium.discoideum.CDK1 LHRDLKPQNL L IDR------- Site 1120
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. IHRDLKPGNL A VNE------- Site 1120
Xenopus.tropicalis.IME2 LHRDLKPQNL L INS------- Site 1120
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U IHADLKPENI M LVDPV----- Site 1120
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. MHRDVKPHNV M IDHE------ Site 1120
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d LHRDLKPQNL L INS------- Site 1120
Species Residue at Site 1937
in 'msaprobs'
muscle

The residue for every species at site 1937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara IHRDLKPQNL L INE------- Site 1120
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. LHRDLKPQNL L LSH------- Site 1120
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD LHRDIKPSNL L LNS------- Site 1120
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos IHCDLKPENI L LCNPK----- Site 1120
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen CHRDIKPQNL L LDPD------ Site 1120
Drosophila.melanogaster.GSK3H..Putative.glycogen.s CHRDIKPQNM L LDSE------ Site 1120
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD AHRDLKVSNL L LTD------- Site 1120
Encephalitozoon.cuniculi.CDK1 FHRDLKPQNI L VDP------- Site 1120
Saccharomyces.kluyveri.IME2 FHRDIKPENI L ISPAN----- Site 1120
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci THTDLKPENI L FVKSD----- Site 1120
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a LHRDLKPSNL L LNT------- Site 1120
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. LHRDLKPQNL L ISH------- Site 1120
Cryptococcus.neoformans.IME2 FHRDMKPENL L ITT------- Site 1120
Homo.sapiens.HIPK4..Homeodomain.interacting.protei IHADLKPENI M LVDQT----- Site 1120
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote IHTDIKPENI L LSVNE----- Site 1120
Candida.lusitaniae.IME2 FHRDVKPENI L VTSTQ----- Site 1120
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom IHADLKPENI M LVDPV----- Site 1120
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A LHRDLKPANI L VMGEG----- Site 1120
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep MHRDLKPANL L ISS------- Site 1120
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. IHRDVKPENI L ITK------- Site 1120
Gallus.gallus.CDK2 LHRDLKPQNL L INA------- Site 1120
Emericella.nidulans.CDK1 LHRDLKPQNL L IDR------- Site 1120
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. FHRDVKPENI L IKQ------- Site 1120
Homo.sapiens.CDK1 LHRDLKPQNL L IDD------- Site 1120
Candida.albicans.CDK1 LHRDLKPQNL L IDK------- Site 1120
Species Residue at Site 1937
in 'msaprobs'
muscle

The residue for every species at site 1937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca MHRDVKPHNV M IDHE------ Site 1120
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a IHRDLKPSNL L VNE------- Site 1120
Mus.musculus.ICK..Serine.threonine.protein.kinase. FHRDLKPENL L CMG------- Site 1120
Saccharomyces.castelli.IME2 FHRDIKPENI L VSPNK----- Site 1120
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec THTDLKPENI L FVDSE----- Site 1120
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep LHRDLKPNNL L LDE------- Site 1120
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. LHRDLKPQNL L ISD------- Site 1120
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly CHRDIKPQNL L VDTR------ Site 1120
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS IHRDIKPTNF L FNLE------ Site 1120
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli LHRDLKPNNL L LDE------- Site 1120
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho LHRDMKAANV L ITR------- Site 1120
Homo.sapiens.HIPK2..Homeodomain.interacting.protei IHADLKPENI M LVDPS----- Site 1120
Acyrthosiphon.pisum.CDK1 IHRDLKPQNL L VNT------- Site 1120
Candida.tropicalis.CDK1 FHRDVKPENI L VIPTL----- Site 1120
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin LHRDLKPANI L VMGDG----- Site 1120
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G CHRDIKPQNL L LDPS------ Site 1120
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR MHRDVKPHNV M IDHD------ Site 1120
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de LHRDLKPQNL L INE------- Site 1120
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 MHRDVKPHNV M IDHE------ Site 1120
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d LHRDLKPQNL L INE------- Site 1120
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA VHRDLKPGNL A VNE------- Site 1120
Candida.albicans.SSN3..Serine.threonine.protein.ki LHRDLKPANI M VSS------- Site 1120
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF FHRDIKPENI L IMD------- Site 1120
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA CHRDIKPQNL L LNPE------ Site 1120
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara IHRDLKPGNL A VNQ------- Site 1120
Species Residue at Site 1937
in 'msaprobs'
muscle

The residue for every species at site 1937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de LHRDLKAANL L IDN------- Site 1120
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei MHRDVKPHNV M IDHE------ Site 1120
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U IHADLKPENI M LVDPV----- Site 1120
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d LHRDLKTSNL L LSH------- Site 1120
Candida.dubliniensis.IME2 FHRDVKPENI L VIPTL----- Site 1120
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a IHRDLKPSNI V VKS------- Site 1120
Aspergillus.niger.IME2 FHRDIKPENI L VSTSA----- Site 1120
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge IHRDLKPSNL A VNE------- Site 1120
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d IHRDIKPENI L VSQ------- Site 1120
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. LHRDLKPQNL L ISD------- Site 1120
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein MHRDVKPHNV M IDHE------ Site 1120
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty IHCDLKPENV L LVNAK----- Site 1120
Schizosaccharomyces.japonicus.IME2 FHRDMKPENI L ISEFP----- Site 1120
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. IHRDLKPSNI V VRS------- Site 1120
Gallus.gallus.CDK1 LHRDLKPQNL L IDD------- Site 1120
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep LHRDLKPQNL L INR------- Site 1120
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P CHRDIKPQNL L LDPT------ Site 1120
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE IHRDLKPQNI L VNR------- Site 1120
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. CHRDIKPQNL L IDPE------ Site 1120
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. IHRDLKPGNL A VNE------- Site 1120
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ MHRDVKPQNV M IDPT------ Site 1120
Kluyveromyces.waltii.IME2 FHRDLKPENI L ISPSN----- Site 1120
Debaryomyces.hansenii.SKY1 IHTDLKPENV L IEIGD----- Site 1120
Saccharomyces.cerevisiae.IME2 FHRDLKPENI L ITPST----- Site 1120
Schizosaccharomyces.japonicus.b.IME2 MHRDIKPENI L IKNKA----- Site 1120
Species Residue at Site 1937
in 'msaprobs'
muscle

The residue for every species at site 1937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un VHRDLKPQNI L VTS------- Site 1120
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein MHRDVKPHNV M IDHQ------ Site 1120
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a LHRDLKPANL F INTE------ Site 1120
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep VHRDLKPQNI L VTS------- Site 1120
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST CHRDIKPQNL L VDPT------ Site 1120
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk IHRDLKPGNL A VNE------- Site 1120
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de IHRDIKPENI L VSQ------- Site 1120
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act IHRDLKPSNI V VKS------- Site 1120
Candida.albicans.IME2 FHRDVKPENI L VIPTL----- Site 1120
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d VHRDLKPENI L VTS------- Site 1120
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k IHRDLKTANL L YTN------- Site 1120
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. IHRDLKPSNL A VNE------- Site 1120
Kluyveromyces.lactis.IME2 FHRDIKPENI L ISPSH----- Site 1120
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina IHRDLKPSNL L VNE------- Site 1120
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. IHRDLKPSNI V VKS------- Site 1120
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. IHRDLKPSNV A VNE------- Site 1120
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 IHRDIKPDNF L MGIGR----- Site 1120
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. IHRDLKPSNV A VNE------- Site 1120
Amphimedon.queenslandica.CDK1 LHRDLKPQNL L ISS------- Site 1120
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d IHRDIKPENI L ITK------- Site 1120
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U IHRDLKPQNL L INE------- Site 1120
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME LHRDLKTSNL L LSH------- Site 1120
Neurospora.crassa.IME2 FHRDIKPENI L VSTSS----- Site 1120
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME LHRDLKPQNL L INK------- Site 1120
Dictyostelium.discoideum.DYRK2..Probable.serine.th IHADLKPENI L LKSPT----- Site 1120
Species Residue at Site 1937
in 'msaprobs'
muscle

The residue for every species at site 1937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep VHRDLKPENI L VTS------- Site 1120
Hydra.magnipapillata.CDK1 LHRDLKPQNL L IDT------- Site 1120
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar IHRDLKVFNL L MTD------- Site 1120
Ashbya.gossypii.IME2 YHRDIKPENI L ISPAN----- Site 1120
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi VHSDLKPANF V IVD------- Site 1120
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos IHCDLKPENI L LKHHG----- Site 1120
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p CHRDIKPQNL L VDPE------ Site 1120
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace IHRDQKPSNI L LDS------- Site 1120
Schizosaccharomyces.pombe.b.IME2 MHRDIKPENI L VKRIS----- Site 1120
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a LHRDLKPSNL L LNT------- Site 1120
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom IHADLKPENI M LVDPV----- Site 1120
Schizosaccharomyces.pombe.CDK1 IHRDLKPQNL L IDK------- Site 1120
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch THTDLKPENI L FVNSD----- Site 1120
Saccoglossus.kowalevskii.CDK1 LHRDLKPQNL L IDS------- Site 1120
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas IHRDVKPDNF L MGLGK----- Site 1120
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac IHRDLKPSNI V VKS------- Site 1120
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep IHRDLKPQNL L LDG------- Site 1120
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable VHRNLKPSNI V LVN------- Site 1120
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep IHRDLKPQNL L INE------- Site 1120
Yarrowia.lipolytica.IME2 FHRDIKPENI L VSRYL----- Site 1120
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil LHRDLKPANI M VTI------- Site 1120
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli LHRDLKPQNL L INA------- Site 1120
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K IHRDVKPTNF L YNPI------ Site 1120
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly CHRDIKPQNL L LDPT------ Site 1120
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk CHRDIKPQNL L LDPE------ Site 1120
Species Residue at Site 1937
in 'msaprobs'
muscle

The residue for every species at site 1937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro IHCDLKPENV L LVNAK----- Site 1120
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo LHRDIKPGNL L VNS------- Site 1120
Scheffersomyces.stipitis.SKY1 IHTDLKPENV L IEIGD----- Site 1120
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep LHRDLKPQNL L INR------- Site 1120

Generated by PhyloBot at 02:56, October 16th 2019
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