cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 1903 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1903 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1903 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1903 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1903
in 'msaprobs'
muscle

The residue for every species at site 1903 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ----DKPFSY N SVRDIMSQIF Site 1086
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ----YRGMPI T LVKTLMKQTL Site 1086
Danio.rerio.CDK1 ----VSGISL P LVKSYLFQLL Site 1086
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -----QALSE E HCQYFLYQIL Site 1086
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -----GDLDP E IVKSFMYQLL Site 1086
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -----GKLHA P EVSALFYQLL Site 1086
Candida.guilliermondii.IME2 ----GKRFTA S TVRSILWQLL Site 1086
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -----RKFSL K TVLMLADQMI Site 1086
Chlamydomonas.reinhardtii.LF4 -----HYVAE E RIKNYMYQLM Site 1086
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---RRKSIPN L SIKLYAFQLF Site 1086
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -----RHFTI K TVLMLVDQMI Site 1086
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 -----RRFSV K TVVQVAVQMI Site 1086
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ANKKPVQLPR G MVKSLLYQIL Site 1086
Schizosaccharomyces.octosporus.b.IME2 ----GKPFTK Y TACHILNQIV Site 1086
Candida.albicans.MAPK3..Extracellular.signal.regul ------NLSD D HIQYFIYQTL Site 1086
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -----PTLTD Y DIRYYIYELL Site 1086
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -----RKFSL K TVLMIAIQTI Site 1086
Suberites.domuncula.JNK..Stress.activated.protein. ------ELDH D RMSYLLYQLL Site 1086
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ----FQPYPL P HVRHMAYQLC Site 1086
Aedes.aegypti.CDK1 ----EKMMDS D LVKSYMYQIT Site 1086
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ----FLPFRM D HIRKMAYQIC Site 1086
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ----YLPYPI H QVRHMAFQLC Site 1086
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ----FQGFSL S IVRRFTLSVL Site 1086
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ----FSPLPL K YIRPILQQVA Site 1086
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -----RGVPE Q LVRSITWQTL Site 1086
Species Residue at Site 1903
in 'msaprobs'
muscle

The residue for every species at site 1903 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---EEKLMDL N ILKKMVYQLI Site 1086
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -----QILTD F DIRFYMYELL Site 1086
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ------RLSN D HICYFLYQIL Site 1086
Strongylocentrotus.purpuratus.CDK1 ----PSGLPP G LVKSYLHQLL Site 1086
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -----RRFSL K TVLMLADQMI Site 1086
Drosophila.melanogaster.CDK1 ----DKHMES E LVRSYLYQIT Site 1086
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -----RKFTL K TVLMIAIQML Site 1086
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -----RKFSL K TVLMLGDQML Site 1086
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ----YKGLKL N KVREICRCIL Site 1086
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -----NLMSM H NVKIFMFQLL Site 1086
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -----GGLNA F NIKLFLFQLL Site 1086
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ------ELDH E RMSYLLYQML Site 1086
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -----NGLDY Q VVQKYLFQII Site 1086
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ------ELDH E RMSYLLYQML Site 1086
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ------EFSE E KIQYLVYQML Site 1086
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -----QPLSS D HVKVFLYQIL Site 1086
Bombus.terrestris.CDK1 -----GGLDQ A LVKSYLYQLL Site 1086
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ----YQGLPL P CVKKIIQQVL Site 1086
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -----NGLDY S RVRKYLFQIL Site 1086
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ------ELDH E RMSYLLYQML Site 1086
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -----VHFSE D HIKSFMKQLM Site 1086
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -----HPLSE K KIMLYMYQLC Site 1086
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---RMTNPPL I LVKVFMFQLL Site 1086
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---RQVAPPP I LIKVFLFQLI Site 1086
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -----RHFTI K TVLMLVDQMI Site 1086
Species Residue at Site 1903
in 'msaprobs'
muscle

The residue for every species at site 1903 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -----RKLSL K SVLMLADQMI Site 1086
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ----FSPLPL K YIRPILEQVL Site 1086
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -----PTLTD Y DIRYYIYELL Site 1086
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -----QPLSS D HVKVFLYQIL Site 1086
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -----RGVPE H LVKSITWQTL Site 1086
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ----FSPLPL K VIRPILQQVA Site 1086
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -----QPFLP G EVKTLMIQLL Site 1086
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -----NGALP D KVRSYIFQLI Site 1086
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ----YLPYPI H QVRHMAFQLC Site 1086
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -----QPFLP G EVKTLMIQLL Site 1086
Naegleria.gruberi.LF4 -----KYFPE H QLKSYMYQVL Site 1086
Saccharomyces.bayanus.IME2 ----RRVFSI P SLKSILSQIL Site 1086
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -----QILTD F DIRFYMYELL Site 1086
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ------RLSE E RVQYLVYQML Site 1086
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -----IILKP A DIKSYMKMLL Site 1086
Dictyostelium.discoideum.DYRK1..Probable.serine.th ----FHGVSL N LIKKFAHQIL Site 1086
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ----FRGVSL N LTRKLAQQLC Site 1086
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ----FQGFSL P LVRKFAHSIL Site 1086
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -----NGVPP E KVKSYIYQLI Site 1086
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -----RLLKD I HKRCIFYQLL Site 1086
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ------TVKP L DRKAYWRNML Site 1086
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ----FHGFNL S IVRRFTFSIL Site 1086
Aspergillus.nidulans.IME2 ----HKYLDG K HVKSILYQIL Site 1086
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -----NSLSF Q EVREYMYNLF Site 1086
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -----QALTP D HVKVFVYQIL Site 1086
Species Residue at Site 1903
in 'msaprobs'
muscle

The residue for every species at site 1903 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -----KLFPE S VIRNIMYQIL Site 1086
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ----LTGIPL P LIKSYLFQLL Site 1086
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ------ELDH E RMSYLLYQML Site 1086
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---LNQRMPL I YVKLYTYQIF Site 1086
Penicillium.marneffei.IME2 ----HKYLEA K HVKSILYQIM Site 1086
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ------KLTD D HVQFLIYQIL Site 1086
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ------TLAE E HAKLFMYQLL Site 1086
Drosophila.melanogaster.MAK -----THLPE P ELKSILFQVL Site 1086
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ----NVGLSI K AVRLYAYQMF Site 1086
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ----DVGLHI K AVRSYSQQLF Site 1086
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -----VHFSE D HIKSFMKQLM Site 1086
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---NGSHFSD A TIKSLIWQVL Site 1086
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -----TPFSE A QVKCIMLQVL Site 1086
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ------ELDH E RMSYLLYQML Site 1086
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ------ELDH E RMSYLLYQML Site 1086
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ----FLPFRL D HIRKMAYQIC Site 1086
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -----NSLSF Q EVREYMLNLF Site 1086
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -----RHFTI K TVLMLVDQMI Site 1086
Candida.parapsilosis.IME2 ----GTRFSS M TLRSILSQLL Site 1086
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---RTRQIPP S ILKSILWQII Site 1086
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---AKLTIPI L YVKVYMYQLF Site 1086
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ------ELDH E RMSYLLYQML Site 1086
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -----QTLTD Y DIRFYMYEIL Site 1086
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ----FLPFHI N DIRNMAYQIC Site 1086
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ------TLTE D HAKLFMYQLL Site 1086
Species Residue at Site 1903
in 'msaprobs'
muscle

The residue for every species at site 1903 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -----NVINM H NVKLFLFQLL Site 1086
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -----QTLTD Y DIRFYMYEIL Site 1086
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---ERKPIPE Y TLKSILWQLL Site 1086
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ------HLSE D KVQYLVYQML Site 1086
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ----FRGVSL N LTRKLAQQLC Site 1086
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -----QTLSD Y DIRYYLYELL Site 1086
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---SKIPLPL L YVKLYLYQLS Site 1086
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---SKQPVPN I FVKLYIYQLC Site 1086
Candida.orthopsilosis.IME2 ----GTRFSS M TLRSILTQLL Site 1086
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -----LVLTP A NIKAYILMTL Site 1086
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ------DLDH E RLSYLLYQML Site 1086
Debaryomyces.hansenii.IME2 ----RIKFSP A TLKSVLTQLL Site 1086
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---NNQRMPN L FVKLYAYQMC Site 1086
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---EKRLIAP R MLKSIMWQIL Site 1086
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---VDMMLPQ E YVKSFMWQLL Site 1086
Caenorhabditis.briggsae.CDK1 ----EEYLPS E TLKSYTFQIL Site 1086
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -----QTLTD Y EIRYYLFELL Site 1086
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -----RPLAP A QVKSYLQMLL Site 1086
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ----FQGFSV Q LVRKFAQSIL Site 1086
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ----EPGVPT E TIKDMMLQLF Site 1086
Monosiga.brevicollis.CDK1 ----GKYMDK D LVKSYTYQIL Site 1086
Saccharomyces.cerevisiae.SKY1 ----HRGIPL I YVKQISKQLL Site 1086
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ------QLSD D HCQYFVYQTL Site 1086
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -----RGLPT A RVRPCLLQVL Site 1086
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---TKQTIPI N FIRLYMYQLF Site 1086
Species Residue at Site 1903
in 'msaprobs'
muscle

The residue for every species at site 1903 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -----RKFSL K TVLMTADQML Site 1086
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -----GLLQD V HVRSIFYQLL Site 1086
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -----NGLDY Q VVQKYLFQII Site 1086
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -----KPFKL S EIKCFLLQLL Site 1086
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -----NGVPP E KVKSYIYQLI Site 1086
Ajellomyces.capsulatus.CDK1 ----RLGLGE A MVKKFMAQLV Site 1086
Dictystelium.discoideum.MAPK3..Extracellular.signa -----QPLSD D HCQYFVYQML Site 1086
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ----EPGVPT E TIKDMMFQLL Site 1086
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -----TPFSE A QVKCIVLQVL Site 1086
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ------ELDH E RMSYLLYQML Site 1086
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ------EFSE D KVQYLVYQML Site 1086
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ----KSGMSP P TIQRLSRELL Site 1086
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -----QPLSS D HIKVFLYQIL Site 1086
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ------ELDH E RMSYLLYQML Site 1086
Saccharomyces.cerevisiae.CDK1 ----DQPLGA D IVKKFMMQLC Site 1086
Lodderomyces.elongisporus.IME2 ----NMRFSQ T TLKSILSQLL Site 1086
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ------KLTD D HVQFLIYQIL Site 1086
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ----YFPYPI H QVRHMALQVC Site 1086
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -----NGVPP E KVKSYIYQLI Site 1086
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---LHQPMDR Y EIKIYMFQLF Site 1086
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -----NVLKD V HKRFVMYQLI Site 1086
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ----FLPFQI D HIRQMAYQIC Site 1086
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ----FSPLPL K YIRPVLQQVG Site 1086
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -----RGVPE P LVKNITWQTL Site 1086
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---AKLITPI I YIKVYMYQLF Site 1086
Species Residue at Site 1903
in 'msaprobs'
muscle

The residue for every species at site 1903 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ----DEYLPL E TLKSYTFQIL Site 1086
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ----PPGLPA E TIKDLMRQFL Site 1086
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---ARASIPP S TLRRLLHQLL Site 1086
Salmo.salar.CDK1 ----VSGIAL P LVKSYLFQLL Site 1086
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -----LVLTP A HIKSYMLMTL Site 1086
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -----RPLAQ A QVKSYLQMLL Site 1086
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ------SIDP W ERKSYWKNML Site 1086
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---AKQTLPV I YVKLYMYQLF Site 1086
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---AKKIIDS E WMQNVLGQVL Site 1086
Aspergillus.fumigatus.IME2 ----HKYLEG K HVKSILYQIL Site 1086
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ANKKPLQLPR G MVKSLLYQIL Site 1086
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ----FLPYPL Q QIRLMAGQIC Site 1086
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ------EFSD E KIQYLVYQML Site 1086
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -----QTLTI D HVKVFVYQIL Site 1086
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ----FSPLPL K YIRPVLQQVA Site 1086
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ------QLSN D HICYFLYQIL Site 1086
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -----NIMSM H NVKLFLYQIL Site 1086
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -----TPFSE A QVKCIVLQVL Site 1086
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -----RGVPE H MVKSIIWQTL Site 1086
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ------DLDH D RMSYLLYQML Site 1086
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ------KQSD D KVQYLIYQIL Site 1086
Candida.glabrata.IME2 ----KRVFSI P SLKSILAQVL Site 1086
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -----KLFPE S VIRNIMYQIL Site 1086
Schizosaccharomyces.pombe.IME2 ----NDPLTL E QVQDIMRQIF Site 1086
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ------KLTD D HIQYFIYQTL Site 1086
Species Residue at Site 1903
in 'msaprobs'
muscle

The residue for every species at site 1903 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -----GDIDM A VCRSFMLQLL Site 1086
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ----FAPLPA R HIRTVTLQVL Site 1086
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -----RRFTM K TVLMLADQMI Site 1086
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -----NLMNM H NVKIFMFQLL Site 1086
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -----NGVSD G VIKSVLWQTL Site 1086
Branchiostoma.floridae.CDK1 ----PSGLPT E LVKSYVHQIL Site 1086
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ----YLPYPI H QVRHMAFQVC Site 1086
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---QKLSMPM L EVKLYIYQLL Site 1086
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -----KRISG E KCREITWQVL Site 1086
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---QRQSIPM I YVKLYMYQLL Site 1086
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. -----TPFSE A QVKCIILQVL Site 1086
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -----KLFPE S AIRNIMYQIL Site 1086
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ----FQPYPL P HVRHMAYQLC Site 1086
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ----FRGVSL N LTRKFAQQMC Site 1086
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ----LTGIPL P LIKSYLFQLL Site 1086
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -----QPLTL E HVRYFLYQLL Site 1086
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ------KLTD D HVQFLIYQIL Site 1086
Lachancea.thermotolerans.SKY1 ----HRGIPV M YVKQIAKQLL Site 1086
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ------PLLE E HARLFMYQLL Site 1086
Dictyostelium.discoideum.CDK1 -----PALCP Q LIKSYLYQLL Site 1086
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ------TLSE D RIQFLVYQML Site 1086
Xenopus.tropicalis.IME2 ----ISGISL A LVKSYLFQLL Site 1086
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ----FSPLPL K YIRPILQQVA Site 1086
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -----QTLTD Y DIRFYMYEIL Site 1086
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ----ISGISL A LVKSYLFQLL Site 1086
Species Residue at Site 1903
in 'msaprobs'
muscle

The residue for every species at site 1903 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ----TGEFPL S LVKNYLFQLL Site 1086
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -----GGLHP H NVRLFMFQLL Site 1086
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -----I-LEE I HKQYTIYQLL Site 1086
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ----FRGVSL N LTRKFAQQMC Site 1086
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---AKQTLPV I YVKLYMYQLF Site 1086
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---AKQTLPV N FVRLYMYQLL Site 1086
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -----KPFLE E QVKCLMLQVL Site 1086
Encephalitozoon.cuniculi.CDK1 ---EGRLVEE G FVRKMSQQLL Site 1086
Saccharomyces.kluyveri.IME2 ----RNVFSL P TLKSILSQIL Site 1086
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ----FLPFQI D HIRQMAYQIC Site 1086
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ------HLSN D HICYFLYQIL Site 1086
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -----GGLHP H NVRLFMFQLL Site 1086
Cryptococcus.neoformans.IME2 ----GRPLAA G LIASCFHQIS Site 1086
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ----FAPLPA R HIRTVTLQVL Site 1086
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ----YQGLPL P CVKKIIQQVL Site 1086
Candida.lusitaniae.IME2 ----GRPLSS K IVKGMLYQLL Site 1086
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ----FSPLPL K YIRPILQQVA Site 1086
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ATKKPVMVPK G MVKSLLYQIL Site 1086
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -----RPLTA S QVKSYMMMLL Site 1086
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -----RGVPE Q QVKSIMWQTL Site 1086
Gallus.gallus.CDK2 ----LGGIAL P LIKSYLFQLL Site 1086
Emericella.nidulans.CDK1 ----NLGLGD A MVKKFMAQLI Site 1086
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -----YPLSE K KIMHYMYQLC Site 1086
Homo.sapiens.CDK1 ----GQYMDS S LVKSYLYQIL Site 1086
Candida.albicans.CDK1 ----GVGLGA N MIKRFMNQLI Site 1086
Species Residue at Site 1903
in 'msaprobs'
muscle

The residue for every species at site 1903 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -----QTLSD Y DIRFYMYEIL Site 1086
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -----QPLTL E HVRYFLYQLL Site 1086
Mus.musculus.ICK..Serine.threonine.protein.kinase. -----KLFPE S AIRNIMYQIL Site 1086
Saccharomyces.castelli.IME2 ----KRVFSI P SLKSILAQIL Site 1086
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ----FQPFPI E HIRIMAYQII Site 1086
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -----LVLTP S HIKAYMLMTL Site 1086
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -----GGLHP D NVKLFLFQLL Site 1086
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---SAQRMPD V LVKLYTYQMA Site 1086
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -----RDLPI K GIKKYIWELL Site 1086
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -----LVLTP A NIKAYILMSL Site 1086
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -----VKFTL S EIKRVMQMLL Site 1086
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ----FSPLPL K YIRPVLQQVA Site 1086
Acyrthosiphon.pisum.CDK1 ---FGFGLPE P QIKSYLYQIL Site 1086
Candida.tropicalis.CDK1 ----NIKFSP V TLKSILSQLL Site 1086
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ATKKQVVVPR G MVKSLLYQIL Site 1086
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---AKQIIPL L YIKLYMYQLF Site 1086
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -----QTLSD Y DIRYYLYELL Site 1086
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -----NIINM H NVKLFLFQLL Site 1086
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -----PTLTD Y DIRYYIYELL Site 1086
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -----NIMSM H NVKLFLYQIL Site 1086
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ------EFSD E KIQYLVYQML Site 1086
Candida.albicans.SSN3..Serine.threonine.protein.ki ---DFKPIPC P TIKSLIWQIL Site 1086
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -----HYLAE D RVKTYMYQLI Site 1086
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---AKQTISL I YVKLYMYQLF Site 1086
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ------LLTE D RIQFLVYQML Site 1086
Species Residue at Site 1903
in 'msaprobs'
muscle

The residue for every species at site 1903 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -----VKFTE P QIKCYMKQLF Site 1086
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -----QTLTD Y DIRFYMYEIL Site 1086
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ----FSPLPL K VIRAILQQVA Site 1086
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -----QPFLP G EVKTLMIQLL Site 1086
Candida.dubliniensis.IME2 ----NIKFSP V TLKSILSQLL Site 1086
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ------ELDH E RMSYLLYQML Site 1086
Aspergillus.niger.IME2 ----HKPFDG K HVKSILYQIL Site 1086
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ------KLTD D HVQFLIYQIL Site 1086
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -----HGLES K RLRKYLFQIL Site 1086
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -----GGLHP D NVKLFLFQLL Site 1086
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -----QTLTD Y DIRFYMYEIL Site 1086
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ----FRGVSL N LARKFAQQLG Site 1086
Schizosaccharomyces.japonicus.IME2 ----LIPFSI D AVKDLVRQIF Site 1086
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ------DLDH E RLSYLLYQML Site 1086
Gallus.gallus.CDK1 ----GQYLDR S RVKSYLYQIL Site 1086
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -----GDLDP E IVKSFLFQLL Site 1086
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---MKTTMPI L EVKLYIYQLF Site 1086
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -----KVIPE K QAKHIIGQMM Site 1086
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---QRQQIPM I YVKLYMYQLL Site 1086
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ------KLGE D RIQFLVYQML Site 1086
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -----PTFKL P DIQYYFTQLL Site 1086
Kluyveromyces.waltii.IME2 ----KRVFSL P SLKSILTQLI Site 1086
Debaryomyces.hansenii.SKY1 ----HRGIPV V FVKQIAKQLL Site 1086
Saccharomyces.cerevisiae.IME2 ----RRVFSI P SLKSILSQIL Site 1086
Schizosaccharomyces.japonicus.b.IME2 ----GRQFSV P TVREMLRQIL Site 1086
Species Residue at Site 1903
in 'msaprobs'
muscle

The residue for every species at site 1903 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ----DPGVPS E IIKDMMLQLL Site 1086
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -----QILTD F DIRFYMYELL Site 1086
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ------PLLE E HARLFMYQLL Site 1086
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ----EPGVPT E TIKDMMFQLL Site 1086
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---LKMQMPR V EIKFYAYQLF Site 1086
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ------KLSE D RIQFLVYQIL Site 1086
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -----HGLES K RLRKYLFQIL Site 1086
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ------ELDH E RLSYLLYQML Site 1086
Candida.albicans.IME2 ----NIKFSP V TLKSILSQLL Site 1086
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ----PPGLPL E TIKDLMKQFL Site 1086
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -----KPFLP S EIKTLIQQLL Site 1086
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ------KLTD D HVQFLIYQIL Site 1086
Kluyveromyces.lactis.IME2 ----RRVFSL P TLRSILFQIL Site 1086
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -----QPLTL E HVRYFLYQLL Site 1086
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ------ELDH E RMSYLLYQML Site 1086
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ------ALSD E HVQFLVYQLL Site 1086
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -----RHFTI K TVLMLVDQMI Site 1086
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ------ALSD E HVQFLVYQLL Site 1086
Amphimedon.queenslandica.CDK1 --------PT G IPTDYLYQLL Site 1086
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -----NGVAD G VIKSVLWQTL Site 1086
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ----AGELPL S LVKNYLFQLL Site 1086
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---RKQSFFP G EVKCLTQQLL Site 1086
Neurospora.crassa.IME2 ----HKCLDN S SVKSILFQIM Site 1086
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -----GEIDM A VCRSFMLQLL Site 1086
Dictyostelium.discoideum.DYRK2..Probable.serine.th ----FQGYNL N LVRRFGAQIL Site 1086
Species Residue at Site 1903
in 'msaprobs'
muscle

The residue for every species at site 1903 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ----PPGLPV E TIKDLMRQFL Site 1086
Hydra.magnipapillata.CDK1 ----KEGIKM N QIKSYTHQLL Site 1086
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -----TPFSE A QVKCIILQVL Site 1086
Ashbya.gossypii.IME2 ----RRVFSL P TLRSILSQIL Site 1086
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ------SINP W ERKSYWKNML Site 1086
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ----FQGFSV Q LVRKFAQSIL Site 1086
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---QRTPMSR L EIKYYMFQLF Site 1086
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -----NLLKD I HKRYVMYQLL Site 1086
Schizosaccharomyces.pombe.b.IME2 ----GRLFTK E TAFNILLQII Site 1086
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ------HLSN D HICYFLYQIL Site 1086
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ----FSPLPL K VIRPVLQQVA Site 1086
Schizosaccharomyces.pombe.CDK1 ---GATSLDP R LVQKFTYQLV Site 1086
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ----YLPYSI G QVRHMAYQIC Site 1086
Saccoglossus.kowalevskii.CDK1 ----PSGLPL P LVKSYLFQLL Site 1086
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -----RKFSL K TVLLLADQMI Site 1086
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ------ELDH E RMSYLLYQML Site 1086
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ----TSELPL P VVKSYLAQLL Site 1086
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---LKAVVDT E WMHTMLSQVL Site 1086
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ----GSELPL H LIKSYLFQLL Site 1086
Yarrowia.lipolytica.IME2 ----KVPFQP H AVRSMLWQII Site 1086
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---EKRMIPP R MVRSIMWQLL Site 1086
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ----VTGISL P LVKSYLFQLL Site 1086
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -----RDMPI K GIKKYMFELL Site 1086
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---MKTTMPI L EVKLYTYQLF Site 1086
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---QKLSMPM L EVKLYIYQLL Site 1086
Species Residue at Site 1903
in 'msaprobs'
muscle

The residue for every species at site 1903 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ----FRGVSL N LARKFAQQLG Site 1086
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -----QPLSS D HVKVFLYQIL Site 1086
Scheffersomyces.stipitis.SKY1 ----HRGIPI V FVKQIAKQLL Site 1086
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -----GDLDP E IVKSFLFQLL Site 1086

Generated by PhyloBot at 16:31, October 23rd 2019
Questions/Comments? help@phylobot.com