cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 1902 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1902 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1902 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1902 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1902
in 'msaprobs'
muscle

The residue for every species at site 1902 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -----DKPFS Y NSVRDIMSQI Site 1085
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -----YRGMP I TLVKTLMKQT Site 1085
Danio.rerio.CDK1 -----VSGIS L PLVKSYLFQL Site 1085
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ------QALS E EHCQYFLYQI Site 1085
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ------GDLD P EIVKSFMYQL Site 1085
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ------GKLH A PEVSALFYQL Site 1085
Candida.guilliermondii.IME2 -----GKRFT A STVRSILWQL Site 1085
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ------RKFS L KTVLMLADQM Site 1085
Chlamydomonas.reinhardtii.LF4 ------HYVA E ERIKNYMYQL Site 1085
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ----RRKSIP N LSIKLYAFQL Site 1085
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ------RHFT I KTVLMLVDQM Site 1085
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ------RRFS V KTVVQVAVQM Site 1085
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho KANKKPVQLP R GMVKSLLYQI Site 1085
Schizosaccharomyces.octosporus.b.IME2 -----GKPFT K YTACHILNQI Site 1085
Candida.albicans.MAPK3..Extracellular.signal.regul -------NLS D DHIQYFIYQT Site 1085
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ------PTLT D YDIRYYIYEL Site 1085
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ------RKFS L KTVLMIAIQT Site 1085
Suberites.domuncula.JNK..Stress.activated.protein. -------ELD H DRMSYLLYQL Site 1085
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -----FQPYP L PHVRHMAYQL Site 1085
Aedes.aegypti.CDK1 -----EKMMD S DLVKSYMYQI Site 1085
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -----FLPFR M DHIRKMAYQI Site 1085
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -----YLPYP I HQVRHMAFQL Site 1085
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -----FQGFS L SIVRRFTLSV Site 1085
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -----FSPLP L KYIRPILQQV Site 1085
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ------RGVP E QLVRSITWQT Site 1085
Species Residue at Site 1902
in 'msaprobs'
muscle

The residue for every species at site 1902 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ----EEKLMD L NILKKMVYQL Site 1085
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ------QILT D FDIRFYMYEL Site 1085
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -------RLS N DHICYFLYQI Site 1085
Strongylocentrotus.purpuratus.CDK1 -----PSGLP P GLVKSYLHQL Site 1085
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ------RRFS L KTVLMLADQM Site 1085
Drosophila.melanogaster.CDK1 -----DKHME S ELVRSYLYQI Site 1085
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ------RKFT L KTVLMIAIQM Site 1085
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ------RKFS L KTVLMLGDQM Site 1085
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -----YKGLK L NKVREICRCI Site 1085
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ------NLMS M HNVKIFMFQL Site 1085
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ------GGLN A FNIKLFLFQL Site 1085
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -------ELD H ERMSYLLYQM Site 1085
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ------NGLD Y QVVQKYLFQI Site 1085
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -------ELD H ERMSYLLYQM Site 1085
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -------EFS E EKIQYLVYQM Site 1085
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ------QPLS S DHVKVFLYQI Site 1085
Bombus.terrestris.CDK1 ------GGLD Q ALVKSYLYQL Site 1085
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -----YQGLP L PCVKKIIQQV Site 1085
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ------NGLD Y SRVRKYLFQI Site 1085
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -------ELD H ERMSYLLYQM Site 1085
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ------VHFS E DHIKSFMKQL Site 1085
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ------HPLS E KKIMLYMYQL Site 1085
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ----RMTNPP L ILVKVFMFQL Site 1085
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ----RQVAPP P ILIKVFLFQL Site 1085
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ------RHFT I KTVLMLVDQM Site 1085
Species Residue at Site 1902
in 'msaprobs'
muscle

The residue for every species at site 1902 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ------RKLS L KSVLMLADQM Site 1085
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -----FSPLP L KYIRPILEQV Site 1085
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ------PTLT D YDIRYYIYEL Site 1085
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ------QPLS S DHVKVFLYQI Site 1085
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ------RGVP E HLVKSITWQT Site 1085
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -----FSPLP L KVIRPILQQV Site 1085
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ------QPFL P GEVKTLMIQL Site 1085
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ------NGAL P DKVRSYIFQL Site 1085
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -----YLPYP I HQVRHMAFQL Site 1085
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ------QPFL P GEVKTLMIQL Site 1085
Naegleria.gruberi.LF4 ------KYFP E HQLKSYMYQV Site 1085
Saccharomyces.bayanus.IME2 -----RRVFS I PSLKSILSQI Site 1085
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ------QILT D FDIRFYMYEL Site 1085
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -------RLS E ERVQYLVYQM Site 1085
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ------IILK P ADIKSYMKML Site 1085
Dictyostelium.discoideum.DYRK1..Probable.serine.th -----FHGVS L NLIKKFAHQI Site 1085
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -----FRGVS L NLTRKLAQQL Site 1085
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -----FQGFS L PLVRKFAHSI Site 1085
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ------NGVP P EKVKSYIYQL Site 1085
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ------RLLK D IHKRCIFYQL Site 1085
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific -------TVK P LDRKAYWRNM Site 1085
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -----FHGFN L SIVRRFTFSI Site 1085
Aspergillus.nidulans.IME2 -----HKYLD G KHVKSILYQI Site 1085
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ------NSLS F QEVREYMYNL Site 1085
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ------QALT P DHVKVFVYQI Site 1085
Species Residue at Site 1902
in 'msaprobs'
muscle

The residue for every species at site 1902 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ------KLFP E SVIRNIMYQI Site 1085
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -----LTGIP L PLIKSYLFQL Site 1085
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -------ELD H ERMSYLLYQM Site 1085
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ----LNQRMP L IYVKLYTYQI Site 1085
Penicillium.marneffei.IME2 -----HKYLE A KHVKSILYQI Site 1085
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -------KLT D DHVQFLIYQI Site 1085
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -------TLA E EHAKLFMYQL Site 1085
Drosophila.melanogaster.MAK ------THLP E PELKSILFQV Site 1085
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -----NVGLS I KAVRLYAYQM Site 1085
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -----DVGLH I KAVRSYSQQL Site 1085
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ------VHFS E DHIKSFMKQL Site 1085
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ----NGSHFS D ATIKSLIWQV Site 1085
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ------TPFS E AQVKCIMLQV Site 1085
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -------ELD H ERMSYLLYQM Site 1085
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -------ELD H ERMSYLLYQM Site 1085
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -----FLPFR L DHIRKMAYQI Site 1085
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ------NSLS F QEVREYMLNL Site 1085
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ------RHFT I KTVLMLVDQM Site 1085
Candida.parapsilosis.IME2 -----GTRFS S MTLRSILSQL Site 1085
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ----RTRQIP P SILKSILWQI Site 1085
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ----AKLTIP I LYVKVYMYQL Site 1085
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -------ELD H ERMSYLLYQM Site 1085
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ------QTLT D YDIRFYMYEI Site 1085
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -----FLPFH I NDIRNMAYQI Site 1085
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -------TLT E DHAKLFMYQL Site 1085
Species Residue at Site 1902
in 'msaprobs'
muscle

The residue for every species at site 1902 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ------NVIN M HNVKLFLFQL Site 1085
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ------QTLT D YDIRFYMYEI Site 1085
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ----ERKPIP E YTLKSILWQL Site 1085
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -------HLS E DKVQYLVYQM Site 1085
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -----FRGVS L NLTRKLAQQL Site 1085
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ------QTLS D YDIRYYLYEL Site 1085
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ----SKIPLP L LYVKLYLYQL Site 1085
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ----SKQPVP N IFVKLYIYQL Site 1085
Candida.orthopsilosis.IME2 -----GTRFS S MTLRSILTQL Site 1085
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ------LVLT P ANIKAYILMT Site 1085
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -------DLD H ERLSYLLYQM Site 1085
Debaryomyces.hansenii.IME2 -----RIKFS P ATLKSVLTQL Site 1085
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ----NNQRMP N LFVKLYAYQM Site 1085
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ----EKRLIA P RMLKSIMWQI Site 1085
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ----VDMMLP Q EYVKSFMWQL Site 1085
Caenorhabditis.briggsae.CDK1 -----EEYLP S ETLKSYTFQI Site 1085
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ------QTLT D YEIRYYLFEL Site 1085
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ------RPLA P AQVKSYLQML Site 1085
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -----FQGFS V QLVRKFAQSI Site 1085
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -----EPGVP T ETIKDMMLQL Site 1085
Monosiga.brevicollis.CDK1 -----GKYMD K DLVKSYTYQI Site 1085
Saccharomyces.cerevisiae.SKY1 -----HRGIP L IYVKQISKQL Site 1085
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -------QLS D DHCQYFVYQT Site 1085
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ------RGLP T ARVRPCLLQV Site 1085
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ----TKQTIP I NFIRLYMYQL Site 1085
Species Residue at Site 1902
in 'msaprobs'
muscle

The residue for every species at site 1902 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ------RKFS L KTVLMTADQM Site 1085
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ------GLLQ D VHVRSIFYQL Site 1085
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ------NGLD Y QVVQKYLFQI Site 1085
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ------KPFK L SEIKCFLLQL Site 1085
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ------NGVP P EKVKSYIYQL Site 1085
Ajellomyces.capsulatus.CDK1 -----RLGLG E AMVKKFMAQL Site 1085
Dictystelium.discoideum.MAPK3..Extracellular.signa ------QPLS D DHCQYFVYQM Site 1085
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -----EPGVP T ETIKDMMFQL Site 1085
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ------TPFS E AQVKCIVLQV Site 1085
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -------ELD H ERMSYLLYQM Site 1085
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -------EFS E DKVQYLVYQM Site 1085
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -----KSGMS P PTIQRLSREL Site 1085
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ------QPLS S DHIKVFLYQI Site 1085
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -------ELD H ERMSYLLYQM Site 1085
Saccharomyces.cerevisiae.CDK1 -----DQPLG A DIVKKFMMQL Site 1085
Lodderomyces.elongisporus.IME2 -----NMRFS Q TTLKSILSQL Site 1085
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -------KLT D DHVQFLIYQI Site 1085
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -----YFPYP I HQVRHMALQV Site 1085
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ------NGVP P EKVKSYIYQL Site 1085
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ----LHQPMD R YEIKIYMFQL Site 1085
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ------NVLK D VHKRFVMYQL Site 1085
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -----FLPFQ I DHIRQMAYQI Site 1085
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -----FSPLP L KYIRPVLQQV Site 1085
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ------RGVP E PLVKNITWQT Site 1085
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ----AKLITP I IYIKVYMYQL Site 1085
Species Residue at Site 1902
in 'msaprobs'
muscle

The residue for every species at site 1902 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -----DEYLP L ETLKSYTFQI Site 1085
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -----PPGLP A ETIKDLMRQF Site 1085
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ----ARASIP P STLRRLLHQL Site 1085
Salmo.salar.CDK1 -----VSGIA L PLVKSYLFQL Site 1085
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ------LVLT P AHIKSYMLMT Site 1085
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ------RPLA Q AQVKSYLQML Site 1085
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi -------SID P WERKSYWKNM Site 1085
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ----AKQTLP V IYVKLYMYQL Site 1085
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ----AKKIID S EWMQNVLGQV Site 1085
Aspergillus.fumigatus.IME2 -----HKYLE G KHVKSILYQI Site 1085
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan KANKKPLQLP R GMVKSLLYQI Site 1085
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -----FLPYP L QQIRLMAGQI Site 1085
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -------EFS D EKIQYLVYQM Site 1085
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ------QTLT I DHVKVFVYQI Site 1085
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -----FSPLP L KYIRPVLQQV Site 1085
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -------QLS N DHICYFLYQI Site 1085
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ------NIMS M HNVKLFLYQI Site 1085
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ------TPFS E AQVKCIVLQV Site 1085
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ------RGVP E HMVKSIIWQT Site 1085
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -------DLD H DRMSYLLYQM Site 1085
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -------KQS D DKVQYLIYQI Site 1085
Candida.glabrata.IME2 -----KRVFS I PSLKSILAQV Site 1085
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ------KLFP E SVIRNIMYQI Site 1085
Schizosaccharomyces.pombe.IME2 -----NDPLT L EQVQDIMRQI Site 1085
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -------KLT D DHIQYFIYQT Site 1085
Species Residue at Site 1902
in 'msaprobs'
muscle

The residue for every species at site 1902 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ------GDID M AVCRSFMLQL Site 1085
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -----FAPLP A RHIRTVTLQV Site 1085
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ------RRFT M KTVLMLADQM Site 1085
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ------NLMN M HNVKIFMFQL Site 1085
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ------NGVS D GVIKSVLWQT Site 1085
Branchiostoma.floridae.CDK1 -----PSGLP T ELVKSYVHQI Site 1085
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -----YLPYP I HQVRHMAFQV Site 1085
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ----QKLSMP M LEVKLYIYQL Site 1085
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ------KRIS G EKCREITWQV Site 1085
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ----QRQSIP M IYVKLYMYQL Site 1085
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ------TPFS E AQVKCIILQV Site 1085
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ------KLFP E SAIRNIMYQI Site 1085
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -----FQPYP L PHVRHMAYQL Site 1085
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -----FRGVS L NLTRKFAQQM Site 1085
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -----LTGIP L PLIKSYLFQL Site 1085
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ------QPLT L EHVRYFLYQL Site 1085
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -------KLT D DHVQFLIYQI Site 1085
Lachancea.thermotolerans.SKY1 -----HRGIP V MYVKQIAKQL Site 1085
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -------PLL E EHARLFMYQL Site 1085
Dictyostelium.discoideum.CDK1 ------PALC P QLIKSYLYQL Site 1085
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -------TLS E DRIQFLVYQM Site 1085
Xenopus.tropicalis.IME2 -----ISGIS L ALVKSYLFQL Site 1085
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -----FSPLP L KYIRPILQQV Site 1085
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ------QTLT D YDIRFYMYEI Site 1085
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -----ISGIS L ALVKSYLFQL Site 1085
Species Residue at Site 1902
in 'msaprobs'
muscle

The residue for every species at site 1902 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -----TGEFP L SLVKNYLFQL Site 1085
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ------GGLH P HNVRLFMFQL Site 1085
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ------I-LE E IHKQYTIYQL Site 1085
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -----FRGVS L NLTRKFAQQM Site 1085
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ----AKQTLP V IYVKLYMYQL Site 1085
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ----AKQTLP V NFVRLYMYQL Site 1085
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ------KPFL E EQVKCLMLQV Site 1085
Encephalitozoon.cuniculi.CDK1 ----EGRLVE E GFVRKMSQQL Site 1085
Saccharomyces.kluyveri.IME2 -----RNVFS L PTLKSILSQI Site 1085
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -----FLPFQ I DHIRQMAYQI Site 1085
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -------HLS N DHICYFLYQI Site 1085
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ------GGLH P HNVRLFMFQL Site 1085
Cryptococcus.neoformans.IME2 -----GRPLA A GLIASCFHQI Site 1085
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -----FAPLP A RHIRTVTLQV Site 1085
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -----YQGLP L PCVKKIIQQV Site 1085
Candida.lusitaniae.IME2 -----GRPLS S KIVKGMLYQL Site 1085
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -----FSPLP L KYIRPILQQV Site 1085
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A KATKKPVMVP K GMVKSLLYQI Site 1085
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ------RPLT A SQVKSYMMML Site 1085
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ------RGVP E QQVKSIMWQT Site 1085
Gallus.gallus.CDK2 -----LGGIA L PLIKSYLFQL Site 1085
Emericella.nidulans.CDK1 -----NLGLG D AMVKKFMAQL Site 1085
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ------YPLS E KKIMHYMYQL Site 1085
Homo.sapiens.CDK1 -----GQYMD S SLVKSYLYQI Site 1085
Candida.albicans.CDK1 -----GVGLG A NMIKRFMNQL Site 1085
Species Residue at Site 1902
in 'msaprobs'
muscle

The residue for every species at site 1902 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ------QTLS D YDIRFYMYEI Site 1085
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ------QPLT L EHVRYFLYQL Site 1085
Mus.musculus.ICK..Serine.threonine.protein.kinase. ------KLFP E SAIRNIMYQI Site 1085
Saccharomyces.castelli.IME2 -----KRVFS I PSLKSILAQI Site 1085
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -----FQPFP I EHIRIMAYQI Site 1085
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ------LVLT P SHIKAYMLMT Site 1085
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ------GGLH P DNVKLFLFQL Site 1085
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ----SAQRMP D VLVKLYTYQM Site 1085
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ------RDLP I KGIKKYIWEL Site 1085
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ------LVLT P ANIKAYILMS Site 1085
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ------VKFT L SEIKRVMQML Site 1085
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -----FSPLP L KYIRPVLQQV Site 1085
Acyrthosiphon.pisum.CDK1 ----FGFGLP E PQIKSYLYQI Site 1085
Candida.tropicalis.CDK1 -----NIKFS P VTLKSILSQL Site 1085
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin KATKKQVVVP R GMVKSLLYQI Site 1085
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ----AKQIIP L LYIKLYMYQL Site 1085
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ------QTLS D YDIRYYLYEL Site 1085
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ------NIIN M HNVKLFLFQL Site 1085
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ------PTLT D YDIRYYIYEL Site 1085
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ------NIMS M HNVKLFLYQI Site 1085
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -------EFS D EKIQYLVYQM Site 1085
Candida.albicans.SSN3..Serine.threonine.protein.ki ----DFKPIP C PTIKSLIWQI Site 1085
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ------HYLA E DRVKTYMYQL Site 1085
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ----AKQTIS L IYVKLYMYQL Site 1085
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -------LLT E DRIQFLVYQM Site 1085
Species Residue at Site 1902
in 'msaprobs'
muscle

The residue for every species at site 1902 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ------VKFT E PQIKCYMKQL Site 1085
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ------QTLT D YDIRFYMYEI Site 1085
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -----FSPLP L KVIRAILQQV Site 1085
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ------QPFL P GEVKTLMIQL Site 1085
Candida.dubliniensis.IME2 -----NIKFS P VTLKSILSQL Site 1085
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -------ELD H ERMSYLLYQM Site 1085
Aspergillus.niger.IME2 -----HKPFD G KHVKSILYQI Site 1085
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -------KLT D DHVQFLIYQI Site 1085
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ------HGLE S KRLRKYLFQI Site 1085
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ------GGLH P DNVKLFLFQL Site 1085
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ------QTLT D YDIRFYMYEI Site 1085
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -----FRGVS L NLARKFAQQL Site 1085
Schizosaccharomyces.japonicus.IME2 -----LIPFS I DAVKDLVRQI Site 1085
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -------DLD H ERLSYLLYQM Site 1085
Gallus.gallus.CDK1 -----GQYLD R SRVKSYLYQI Site 1085
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ------GDLD P EIVKSFLFQL Site 1085
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ----MKTTMP I LEVKLYIYQL Site 1085
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ------KVIP E KQAKHIIGQM Site 1085
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ----QRQQIP M IYVKLYMYQL Site 1085
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -------KLG E DRIQFLVYQM Site 1085
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ------PTFK L PDIQYYFTQL Site 1085
Kluyveromyces.waltii.IME2 -----KRVFS L PSLKSILTQL Site 1085
Debaryomyces.hansenii.SKY1 -----HRGIP V VFVKQIAKQL Site 1085
Saccharomyces.cerevisiae.IME2 -----RRVFS I PSLKSILSQI Site 1085
Schizosaccharomyces.japonicus.b.IME2 -----GRQFS V PTVREMLRQI Site 1085
Species Residue at Site 1902
in 'msaprobs'
muscle

The residue for every species at site 1902 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -----DPGVP S EIIKDMMLQL Site 1085
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ------QILT D FDIRFYMYEL Site 1085
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -------PLL E EHARLFMYQL Site 1085
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -----EPGVP T ETIKDMMFQL Site 1085
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ----LKMQMP R VEIKFYAYQL Site 1085
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -------KLS E DRIQFLVYQI Site 1085
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ------HGLE S KRLRKYLFQI Site 1085
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -------ELD H ERLSYLLYQM Site 1085
Candida.albicans.IME2 -----NIKFS P VTLKSILSQL Site 1085
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -----PPGLP L ETIKDLMKQF Site 1085
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ------KPFL P SEIKTLIQQL Site 1085
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -------KLT D DHVQFLIYQI Site 1085
Kluyveromyces.lactis.IME2 -----RRVFS L PTLRSILFQI Site 1085
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ------QPLT L EHVRYFLYQL Site 1085
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -------ELD H ERMSYLLYQM Site 1085
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -------ALS D EHVQFLVYQL Site 1085
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ------RHFT I KTVLMLVDQM Site 1085
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -------ALS D EHVQFLVYQL Site 1085
Amphimedon.queenslandica.CDK1 ---------P T GIPTDYLYQL Site 1085
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ------NGVA D GVIKSVLWQT Site 1085
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -----AGELP L SLVKNYLFQL Site 1085
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ----RKQSFF P GEVKCLTQQL Site 1085
Neurospora.crassa.IME2 -----HKCLD N SSVKSILFQI Site 1085
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ------GEID M AVCRSFMLQL Site 1085
Dictyostelium.discoideum.DYRK2..Probable.serine.th -----FQGYN L NLVRRFGAQI Site 1085
Species Residue at Site 1902
in 'msaprobs'
muscle

The residue for every species at site 1902 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -----PPGLP V ETIKDLMRQF Site 1085
Hydra.magnipapillata.CDK1 -----KEGIK M NQIKSYTHQL Site 1085
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ------TPFS E AQVKCIILQV Site 1085
Ashbya.gossypii.IME2 -----RRVFS L PTLRSILSQI Site 1085
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi -------SIN P WERKSYWKNM Site 1085
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -----FQGFS V QLVRKFAQSI Site 1085
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ----QRTPMS R LEIKYYMFQL Site 1085
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ------NLLK D IHKRYVMYQL Site 1085
Schizosaccharomyces.pombe.b.IME2 -----GRLFT K ETAFNILLQI Site 1085
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -------HLS N DHICYFLYQI Site 1085
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -----FSPLP L KVIRPVLQQV Site 1085
Schizosaccharomyces.pombe.CDK1 ----GATSLD P RLVQKFTYQL Site 1085
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -----YLPYS I GQVRHMAYQI Site 1085
Saccoglossus.kowalevskii.CDK1 -----PSGLP L PLVKSYLFQL Site 1085
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ------RKFS L KTVLLLADQM Site 1085
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -------ELD H ERMSYLLYQM Site 1085
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -----TSELP L PVVKSYLAQL Site 1085
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ----LKAVVD T EWMHTMLSQV Site 1085
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -----GSELP L HLIKSYLFQL Site 1085
Yarrowia.lipolytica.IME2 -----KVPFQ P HAVRSMLWQI Site 1085
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ----EKRMIP P RMVRSIMWQL Site 1085
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -----VTGIS L PLVKSYLFQL Site 1085
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ------RDMP I KGIKKYMFEL Site 1085
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ----MKTTMP I LEVKLYTYQL Site 1085
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ----QKLSMP M LEVKLYIYQL Site 1085
Species Residue at Site 1902
in 'msaprobs'
muscle

The residue for every species at site 1902 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -----FRGVS L NLARKFAQQL Site 1085
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ------QPLS S DHVKVFLYQI Site 1085
Scheffersomyces.stipitis.SKY1 -----HRGIP I VFVKQIAKQL Site 1085
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ------GDLD P EIVKSFLFQL Site 1085

Generated by PhyloBot at 10:03, February 29th 2020
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