cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 1901 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1901 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1901 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1901 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1901
in 'msaprobs'
muscle

The residue for every species at site 1901 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ------DKPF S YNSVRDIMSQ Site 1084
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ------YRGM P ITLVKTLMKQ Site 1084
Danio.rerio.CDK1 ------VSGI S LPLVKSYLFQ Site 1084
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -------QAL S EEHCQYFLYQ Site 1084
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -------GDL D PEIVKSFMYQ Site 1084
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -------GKL H APEVSALFYQ Site 1084
Candida.guilliermondii.IME2 ------GKRF T ASTVRSILWQ Site 1084
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -------RKF S LKTVLMLADQ Site 1084
Chlamydomonas.reinhardtii.LF4 -------HYV A EERIKNYMYQ Site 1084
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -----RRKSI P NLSIKLYAFQ Site 1084
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -------RHF T IKTVLMLVDQ Site 1084
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 -------RRF S VKTVVQVAVQ Site 1084
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho SKANKKPVQL P RGMVKSLLYQ Site 1084
Schizosaccharomyces.octosporus.b.IME2 ------GKPF T KYTACHILNQ Site 1084
Candida.albicans.MAPK3..Extracellular.signal.regul --------NL S DDHIQYFIYQ Site 1084
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -------PTL T DYDIRYYIYE Site 1084
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -------RKF S LKTVLMIAIQ Site 1084
Suberites.domuncula.JNK..Stress.activated.protein. --------EL D HDRMSYLLYQ Site 1084
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ------FQPY P LPHVRHMAYQ Site 1084
Aedes.aegypti.CDK1 ------EKMM D SDLVKSYMYQ Site 1084
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ------FLPF R MDHIRKMAYQ Site 1084
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ------YLPY P IHQVRHMAFQ Site 1084
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ------FQGF S LSIVRRFTLS Site 1084
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ------FSPL P LKYIRPILQQ Site 1084
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -------RGV P EQLVRSITWQ Site 1084
Species Residue at Site 1901
in 'msaprobs'
muscle

The residue for every species at site 1901 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -----EEKLM D LNILKKMVYQ Site 1084
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -------QIL T DFDIRFYMYE Site 1084
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM --------RL S NDHICYFLYQ Site 1084
Strongylocentrotus.purpuratus.CDK1 ------PSGL P PGLVKSYLHQ Site 1084
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -------RRF S LKTVLMLADQ Site 1084
Drosophila.melanogaster.CDK1 ------DKHM E SELVRSYLYQ Site 1084
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -------RKF T LKTVLMIAIQ Site 1084
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -------RKF S LKTVLMLGDQ Site 1084
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ------YKGL K LNKVREICRC Site 1084
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -------NLM S MHNVKIFMFQ Site 1084
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -------GGL N AFNIKLFLFQ Site 1084
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET --------EL D HERMSYLLYQ Site 1084
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -------NGL D YQVVQKYLFQ Site 1084
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U --------EL D HERMSYLLYQ Site 1084
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. --------EF S EEKIQYLVYQ Site 1084
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -------QPL S SDHVKVFLYQ Site 1084
Bombus.terrestris.CDK1 -------GGL D QALVKSYLYQ Site 1084
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ------YQGL P LPCVKKIIQQ Site 1084
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -------NGL D YSRVRKYLFQ Site 1084
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. --------EL D HERMSYLLYQ Site 1084
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -------VHF S EDHIKSFMKQ Site 1084
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -------HPL S EKKIMLYMYQ Site 1084
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -----RMTNP P LILVKVFMFQ Site 1084
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -----RQVAP P PILIKVFLFQ Site 1084
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -------RHF T IKTVLMLVDQ Site 1084
Species Residue at Site 1901
in 'msaprobs'
muscle

The residue for every species at site 1901 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -------RKL S LKSVLMLADQ Site 1084
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ------FSPL P LKYIRPILEQ Site 1084
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -------PTL T DYDIRYYIYE Site 1084
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -------QPL S SDHVKVFLYQ Site 1084
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -------RGV P EHLVKSITWQ Site 1084
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ------FSPL P LKVIRPILQQ Site 1084
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -------QPF L PGEVKTLMIQ Site 1084
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -------NGA L PDKVRSYIFQ Site 1084
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ------YLPY P IHQVRHMAFQ Site 1084
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -------QPF L PGEVKTLMIQ Site 1084
Naegleria.gruberi.LF4 -------KYF P EHQLKSYMYQ Site 1084
Saccharomyces.bayanus.IME2 ------RRVF S IPSLKSILSQ Site 1084
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -------QIL T DFDIRFYMYE Site 1084
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a --------RL S EERVQYLVYQ Site 1084
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -------IIL K PADIKSYMKM Site 1084
Dictyostelium.discoideum.DYRK1..Probable.serine.th ------FHGV S LNLIKKFAHQ Site 1084
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ------FRGV S LNLTRKLAQQ Site 1084
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ------FQGF S LPLVRKFAHS Site 1084
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -------NGV P PEKVKSYIYQ Site 1084
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -------RLL K DIHKRCIFYQ Site 1084
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific --------TV K PLDRKAYWRN Site 1084
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ------FHGF N LSIVRRFTFS Site 1084
Aspergillus.nidulans.IME2 ------HKYL D GKHVKSILYQ Site 1084
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -------NSL S FQEVREYMYN Site 1084
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -------QAL T PDHVKVFVYQ Site 1084
Species Residue at Site 1901
in 'msaprobs'
muscle

The residue for every species at site 1901 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -------KLF P ESVIRNIMYQ Site 1084
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ------LTGI P LPLIKSYLFQ Site 1084
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. --------EL D HERMSYLLYQ Site 1084
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -----LNQRM P LIYVKLYTYQ Site 1084
Penicillium.marneffei.IME2 ------HKYL E AKHVKSILYQ Site 1084
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen --------KL T DDHVQFLIYQ Site 1084
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a --------TL A EEHAKLFMYQ Site 1084
Drosophila.melanogaster.MAK -------THL P EPELKSILFQ Site 1084
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ------NVGL S IKAVRLYAYQ Site 1084
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ------DVGL H IKAVRSYSQQ Site 1084
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -------VHF S EDHIKSFMKQ Site 1084
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -----NGSHF S DATIKSLIWQ Site 1084
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -------TPF S EAQVKCIMLQ Site 1084
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin --------EL D HERMSYLLYQ Site 1084
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a --------EL D HERMSYLLYQ Site 1084
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ------FLPF R LDHIRKMAYQ Site 1084
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -------NSL S FQEVREYMLN Site 1084
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -------RHF T IKTVLMLVDQ Site 1084
Candida.parapsilosis.IME2 ------GTRF S SMTLRSILSQ Site 1084
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p S----RTRQI P PSILKSILWQ Site 1084
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -----AKLTI P ILYVKVYMYQ Site 1084
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. --------EL D HERMSYLLYQ Site 1084
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -------QTL T DYDIRFYMYE Site 1084
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ------FLPF H INDIRNMAYQ Site 1084
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a --------TL T EDHAKLFMYQ Site 1084
Species Residue at Site 1901
in 'msaprobs'
muscle

The residue for every species at site 1901 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -------NVI N MHNVKLFLFQ Site 1084
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -------QTL T DYDIRFYMYE Site 1084
Yarrowia.lipolytica.SSN3..Serine.threonine.protein P----ERKPI P EYTLKSILWQ Site 1084
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. --------HL S EDKVQYLVYQ Site 1084
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ------FRGV S LNLTRKLAQQ Site 1084
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -------QTL S DYDIRYYLYE Site 1084
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -----SKIPL P LLYVKLYLYQ Site 1084
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -----SKQPV P NIFVKLYIYQ Site 1084
Candida.orthopsilosis.IME2 ------GTRF S SMTLRSILTQ Site 1084
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -------LVL T PANIKAYILM Site 1084
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str --------DL D HERLSYLLYQ Site 1084
Debaryomyces.hansenii.IME2 ------RIKF S PATLKSVLTQ Site 1084
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -----NNQRM P NLFVKLYAYQ Site 1084
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin P----EKRLI A PRMLKSIMWQ Site 1084
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -----VDMML P QEYVKSFMWQ Site 1084
Caenorhabditis.briggsae.CDK1 ------EEYL P SETLKSYTFQ Site 1084
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -------QTL T DYEIRYYLFE Site 1084
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -------RPL A PAQVKSYLQM Site 1084
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ------FQGF S VQLVRKFAQS Site 1084
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ------EPGV P TETIKDMMLQ Site 1084
Monosiga.brevicollis.CDK1 ------GKYM D KDLVKSYTYQ Site 1084
Saccharomyces.cerevisiae.SKY1 ------HRGI P LIYVKQISKQ Site 1084
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP --------QL S DDHCQYFVYQ Site 1084
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -------RGL P TARVRPCLLQ Site 1084
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -----TKQTI P INFIRLYMYQ Site 1084
Species Residue at Site 1901
in 'msaprobs'
muscle

The residue for every species at site 1901 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -------RKF S LKTVLMTADQ Site 1084
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -------GLL Q DVHVRSIFYQ Site 1084
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -------NGL D YQVVQKYLFQ Site 1084
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -------KPF K LSEIKCFLLQ Site 1084
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -------NGV P PEKVKSYIYQ Site 1084
Ajellomyces.capsulatus.CDK1 ------RLGL G EAMVKKFMAQ Site 1084
Dictystelium.discoideum.MAPK3..Extracellular.signa -------QPL S DDHCQYFVYQ Site 1084
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ------EPGV P TETIKDMMFQ Site 1084
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -------TPF S EAQVKCIVLQ Site 1084
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac --------EL D HERMSYLLYQ Site 1084
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. --------EF S EDKVQYLVYQ Site 1084
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ------KSGM S PPTIQRLSRE Site 1084
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -------QPL S SDHIKVFLYQ Site 1084
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha --------EL D HERMSYLLYQ Site 1084
Saccharomyces.cerevisiae.CDK1 ------DQPL G ADIVKKFMMQ Site 1084
Lodderomyces.elongisporus.IME2 ------NMRF S QTTLKSILSQ Site 1084
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen --------KL T DDHVQFLIYQ Site 1084
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ------YFPY P IHQVRHMALQ Site 1084
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -------NGV P PEKVKSYIYQ Site 1084
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -----LHQPM D RYEIKIYMFQ Site 1084
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -------NVL K DVHKRFVMYQ Site 1084
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ------FLPF Q IDHIRQMAYQ Site 1084
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ------FSPL P LKYIRPVLQQ Site 1084
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -------RGV P EPLVKNITWQ Site 1084
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -----AKLIT P IIYIKVYMYQ Site 1084
Species Residue at Site 1901
in 'msaprobs'
muscle

The residue for every species at site 1901 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ------DEYL P LETLKSYTFQ Site 1084
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ------PPGL P AETIKDLMRQ Site 1084
Cryptococcus.neoformans.SSN3..Serine.threonine.pro T----ARASI P PSTLRRLLHQ Site 1084
Salmo.salar.CDK1 ------VSGI A LPLVKSYLFQ Site 1084
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -------LVL T PAHIKSYMLM Site 1084
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -------RPL A QAQVKSYLQM Site 1084
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi --------SI D PWERKSYWKN Site 1084
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -----AKQTL P VIYVKLYMYQ Site 1084
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -----AKKII D SEWMQNVLGQ Site 1084
Aspergillus.fumigatus.IME2 ------HKYL E GKHVKSILYQ Site 1084
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan SKANKKPLQL P RGMVKSLLYQ Site 1084
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ------FLPY P LQQIRLMAGQ Site 1084
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha --------EF S DEKIQYLVYQ Site 1084
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -------QTL T IDHVKVFVYQ Site 1084
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ------FSPL P LKYIRPVLQQ Site 1084
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina --------QL S NDHICYFLYQ Site 1084
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -------NIM S MHNVKLFLYQ Site 1084
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -------TPF S EAQVKCIVLQ Site 1084
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -------RGV P EHMVKSIIWQ Site 1084
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S --------DL D HDRMSYLLYQ Site 1084
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. --------KQ S DDKVQYLIYQ Site 1084
Candida.glabrata.IME2 ------KRVF S IPSLKSILAQ Site 1084
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -------KLF P ESVIRNIMYQ Site 1084
Schizosaccharomyces.pombe.IME2 ------NDPL T LEQVQDIMRQ Site 1084
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P --------KL T DDHIQYFIYQ Site 1084
Species Residue at Site 1901
in 'msaprobs'
muscle

The residue for every species at site 1901 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -------GDI D MAVCRSFMLQ Site 1084
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ------FAPL P ARHIRTVTLQ Site 1084
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -------RRF T MKTVLMLADQ Site 1084
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -------NLM N MHNVKIFMFQ Site 1084
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -------NGV S DGVIKSVLWQ Site 1084
Branchiostoma.floridae.CDK1 ------PSGL P TELVKSYVHQ Site 1084
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ------YLPY P IHQVRHMAFQ Site 1084
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -----QKLSM P MLEVKLYIYQ Site 1084
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -------KRI S GEKCREITWQ Site 1084
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -----QRQSI P MIYVKLYMYQ Site 1084
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. -------TPF S EAQVKCIILQ Site 1084
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -------KLF P ESAIRNIMYQ Site 1084
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ------FQPY P LPHVRHMAYQ Site 1084
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ------FRGV S LNLTRKFAQQ Site 1084
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ------LTGI P LPLIKSYLFQ Site 1084
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -------QPL T LEHVRYFLYQ Site 1084
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. --------KL T DDHVQFLIYQ Site 1084
Lachancea.thermotolerans.SKY1 ------HRGI P VMYVKQIAKQ Site 1084
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a --------PL L EEHARLFMYQ Site 1084
Dictyostelium.discoideum.CDK1 -------PAL C PQLIKSYLYQ Site 1084
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. --------TL S EDRIQFLVYQ Site 1084
Xenopus.tropicalis.IME2 ------ISGI S LALVKSYLFQ Site 1084
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ------FSPL P LKYIRPILQQ Site 1084
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -------QTL T DYDIRFYMYE Site 1084
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ------ISGI S LALVKSYLFQ Site 1084
Species Residue at Site 1901
in 'msaprobs'
muscle

The residue for every species at site 1901 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ------TGEF P LSLVKNYLFQ Site 1084
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -------GGL H PHNVRLFMFQ Site 1084
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -------I-L E EIHKQYTIYQ Site 1084
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ------FRGV S LNLTRKFAQQ Site 1084
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -----AKQTL P VIYVKLYMYQ Site 1084
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -----AKQTL P VNFVRLYMYQ Site 1084
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -------KPF L EEQVKCLMLQ Site 1084
Encephalitozoon.cuniculi.CDK1 -----EGRLV E EGFVRKMSQQ Site 1084
Saccharomyces.kluyveri.IME2 ------RNVF S LPTLKSILSQ Site 1084
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ------FLPF Q IDHIRQMAYQ Site 1084
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a --------HL S NDHICYFLYQ Site 1084
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -------GGL H PHNVRLFMFQ Site 1084
Cryptococcus.neoformans.IME2 ------GRPL A AGLIASCFHQ Site 1084
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ------FAPL P ARHIRTVTLQ Site 1084
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ------YQGL P LPCVKKIIQQ Site 1084
Candida.lusitaniae.IME2 ------GRPL S SKIVKGMLYQ Site 1084
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ------FSPL P LKYIRPILQQ Site 1084
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A AKATKKPVMV P KGMVKSLLYQ Site 1084
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -------RPL T ASQVKSYMMM Site 1084
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -------RGV P EQQVKSIMWQ Site 1084
Gallus.gallus.CDK2 ------LGGI A LPLIKSYLFQ Site 1084
Emericella.nidulans.CDK1 ------NLGL G DAMVKKFMAQ Site 1084
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -------YPL S EKKIMHYMYQ Site 1084
Homo.sapiens.CDK1 ------GQYM D SSLVKSYLYQ Site 1084
Candida.albicans.CDK1 ------GVGL G ANMIKRFMNQ Site 1084
Species Residue at Site 1901
in 'msaprobs'
muscle

The residue for every species at site 1901 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -------QTL S DYDIRFYMYE Site 1084
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -------QPL T LEHVRYFLYQ Site 1084
Mus.musculus.ICK..Serine.threonine.protein.kinase. -------KLF P ESAIRNIMYQ Site 1084
Saccharomyces.castelli.IME2 ------KRVF S IPSLKSILAQ Site 1084
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ------FQPF P IEHIRIMAYQ Site 1084
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -------LVL T PSHIKAYMLM Site 1084
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -------GGL H PDNVKLFLFQ Site 1084
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -----SAQRM P DVLVKLYTYQ Site 1084
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -------RDL P IKGIKKYIWE Site 1084
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -------LVL T PANIKAYILM Site 1084
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -------VKF T LSEIKRVMQM Site 1084
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ------FSPL P LKYIRPVLQQ Site 1084
Acyrthosiphon.pisum.CDK1 E----FGFGL P EPQIKSYLYQ Site 1084
Candida.tropicalis.CDK1 ------NIKF S PVTLKSILSQ Site 1084
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin AKATKKQVVV P RGMVKSLLYQ Site 1084
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -----AKQII P LLYIKLYMYQ Site 1084
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -------QTL S DYDIRYYLYE Site 1084
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -------NII N MHNVKLFLFQ Site 1084
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -------PTL T DYDIRYYIYE Site 1084
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -------NIM S MHNVKLFLYQ Site 1084
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA --------EF S DEKIQYLVYQ Site 1084
Candida.albicans.SSN3..Serine.threonine.protein.ki P----DFKPI P CPTIKSLIWQ Site 1084
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -------HYL A EDRVKTYMYQ Site 1084
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -----AKQTI S LIYVKLYMYQ Site 1084
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara --------LL T EDRIQFLVYQ Site 1084
Species Residue at Site 1901
in 'msaprobs'
muscle

The residue for every species at site 1901 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -------VKF T EPQIKCYMKQ Site 1084
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -------QTL T DYDIRFYMYE Site 1084
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ------FSPL P LKVIRAILQQ Site 1084
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -------QPF L PGEVKTLMIQ Site 1084
Candida.dubliniensis.IME2 ------NIKF S PVTLKSILSQ Site 1084
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a --------EL D HERMSYLLYQ Site 1084
Aspergillus.niger.IME2 ------HKPF D GKHVKSILYQ Site 1084
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge --------KL T DDHVQFLIYQ Site 1084
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -------HGL E SKRLRKYLFQ Site 1084
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -------GGL H PDNVKLFLFQ Site 1084
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -------QTL T DYDIRFYMYE Site 1084
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ------FRGV S LNLARKFAQQ Site 1084
Schizosaccharomyces.japonicus.IME2 ------LIPF S IDAVKDLVRQ Site 1084
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. --------DL D HERLSYLLYQ Site 1084
Gallus.gallus.CDK1 ------GQYL D RSRVKSYLYQ Site 1084
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -------GDL D PEIVKSFLFQ Site 1084
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -----MKTTM P ILEVKLYIYQ Site 1084
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -------KVI P EKQAKHIIGQ Site 1084
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -----QRQQI P MIYVKLYMYQ Site 1084
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. --------KL G EDRIQFLVYQ Site 1084
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -------PTF K LPDIQYYFTQ Site 1084
Kluyveromyces.waltii.IME2 ------KRVF S LPSLKSILTQ Site 1084
Debaryomyces.hansenii.SKY1 ------HRGI P VVFVKQIAKQ Site 1084
Saccharomyces.cerevisiae.IME2 ------RRVF S IPSLKSILSQ Site 1084
Schizosaccharomyces.japonicus.b.IME2 ------GRQF S VPTVREMLRQ Site 1084
Species Residue at Site 1901
in 'msaprobs'
muscle

The residue for every species at site 1901 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ------DPGV P SEIIKDMMLQ Site 1084
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -------QIL T DFDIRFYMYE Site 1084
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a --------PL L EEHARLFMYQ Site 1084
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ------EPGV P TETIKDMMFQ Site 1084
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -----LKMQM P RVEIKFYAYQ Site 1084
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk --------KL S EDRIQFLVYQ Site 1084
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -------HGL E SKRLRKYLFQ Site 1084
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act --------EL D HERLSYLLYQ Site 1084
Candida.albicans.IME2 ------NIKF S PVTLKSILSQ Site 1084
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ------PPGL P LETIKDLMKQ Site 1084
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -------KPF L PSEIKTLIQQ Site 1084
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. --------KL T DDHVQFLIYQ Site 1084
Kluyveromyces.lactis.IME2 ------RRVF S LPTLRSILFQ Site 1084
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -------QPL T LEHVRYFLYQ Site 1084
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. --------EL D HERMSYLLYQ Site 1084
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. --------AL S DEHVQFLVYQ Site 1084
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -------RHF T IKTVLMLVDQ Site 1084
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. --------AL S DEHVQFLVYQ Site 1084
Amphimedon.queenslandica.CDK1 ---------- P TGIPTDYLYQ Site 1084
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -------NGV A DGVIKSVLWQ Site 1084
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ------AGEL P LSLVKNYLFQ Site 1084
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -----RKQSF F PGEVKCLTQQ Site 1084
Neurospora.crassa.IME2 ------HKCL D NSSVKSILFQ Site 1084
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -------GEI D MAVCRSFMLQ Site 1084
Dictyostelium.discoideum.DYRK2..Probable.serine.th ------FQGY N LNLVRRFGAQ Site 1084
Species Residue at Site 1901
in 'msaprobs'
muscle

The residue for every species at site 1901 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ------PPGL P VETIKDLMRQ Site 1084
Hydra.magnipapillata.CDK1 ------KEGI K MNQIKSYTHQ Site 1084
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -------TPF S EAQVKCIILQ Site 1084
Ashbya.gossypii.IME2 ------RRVF S LPTLRSILSQ Site 1084
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi --------SI N PWERKSYWKN Site 1084
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ------FQGF S VQLVRKFAQS Site 1084
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -----QRTPM S RLEIKYYMFQ Site 1084
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -------NLL K DIHKRYVMYQ Site 1084
Schizosaccharomyces.pombe.b.IME2 ------GRLF T KETAFNILLQ Site 1084
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a --------HL S NDHICYFLYQ Site 1084
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ------FSPL P LKVIRPVLQQ Site 1084
Schizosaccharomyces.pombe.CDK1 T----GATSL D PRLVQKFTYQ Site 1084
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ------YLPY S IGQVRHMAYQ Site 1084
Saccoglossus.kowalevskii.CDK1 ------PSGL P LPLVKSYLFQ Site 1084
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -------RKF S LKTVLLLADQ Site 1084
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac --------EL D HERMSYLLYQ Site 1084
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ------TSEL P LPVVKSYLAQ Site 1084
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -----LKAVV D TEWMHTMLSQ Site 1084
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ------GSEL P LHLIKSYLFQ Site 1084
Yarrowia.lipolytica.IME2 ------KVPF Q PHAVRSMLWQ Site 1084
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil P----EKRMI P PRMVRSIMWQ Site 1084
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ------VTGI S LPLVKSYLFQ Site 1084
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -------RDM P IKGIKKYMFE Site 1084
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -----MKTTM P ILEVKLYTYQ Site 1084
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -----QKLSM P MLEVKLYIYQ Site 1084
Species Residue at Site 1901
in 'msaprobs'
muscle

The residue for every species at site 1901 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ------FRGV S LNLARKFAQQ Site 1084
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -------QPL S SDHVKVFLYQ Site 1084
Scheffersomyces.stipitis.SKY1 ------HRGI P IVFVKQIAKQ Site 1084
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -------GDL D PEIVKSFLFQ Site 1084

Generated by PhyloBot at 02:21, October 16th 2019
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