cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 19 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 19 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 19 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 19 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 19
in 'msaprobs'
muscle

The residue for every species at site 19 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- M ------K--- Site 566
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- M ------S--- Site 297
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- M ------E--- Site 550
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- M ------E--- Site 599
Candida.guilliermondii.IME2 ---------- M ------V--- Site 541
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- M ------D--- Site 602
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- M ------S--- Site 584
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- M ------D--- Site 591
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- M ------S--- Site 544
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- M ------D--- Site 591
Schizosaccharomyces.octosporus.b.IME2 ---------- M ------S--- Site 594
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- M ------N--- Site 548
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- M ------H--- Site 321
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- M ------C--- Site 222
Suberites.domuncula.JNK..Stress.activated.protein. ---------- M ------S--- Site 595
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- M ------P--- Site 142
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- M ------R--- Site 284
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- M ------P--- Site 283
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- M ------P--- Site 334
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---------- M ------A--- Site 239
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 19
in 'msaprobs'
muscle

The residue for every species at site 19 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- M ------S--- Site 599
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- M ------P--- Site 564
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- M ------E--- Site 585
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- M ------D--- Site 602
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- M ------D--- Site 602
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- M ------S--- Site 585
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- M ------N--- Site 283
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- M ------G--- Site 243
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------- M ------S--- Site 540
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------- M ------S--- Site 540
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- M ------S--- Site 592
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- M ------S--- Site 293
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- M ------E--- Site 336
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- M ---------- Site 723
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- M ------S--- Site 591
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---------- M ------PNSE Site 3
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- M ------S--- Site 587
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- M ------S--- Site 591
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- M ------D--- Site 591
Species Residue at Site 19
in 'msaprobs'
muscle

The residue for every species at site 19 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- M ------E--- Site 602
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------- M ------I--- Site 320
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- M ------I--- Site 315
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- M ------S--- Site 281
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---------- M ------A--- Site 235
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- M ------G--- Site 203
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- M ------K--- Site 598
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- M ------P--- Site 283
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- M ------G--- Site 191
Naegleria.gruberi.LF4 ---------- M ------T--- Site 325
Saccharomyces.bayanus.IME2 ---------- M ------V--- Site 584
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- M ------P--- Site 564
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- M ------T--- Site 592
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- M ------D--- Site 151
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- M ------A--- Site 317
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- M ------L--- Site 233
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- M ------K--- Site 598
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- M ------C--- Site 598
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- M ------D--- Site 3
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- M ------Q--- Site 225
Aspergillus.nidulans.IME2 ---------- M ------T--- Site 589
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- M ------E--- Site 548
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- M ------V--- Site 217
Species Residue at Site 19
in 'msaprobs'
muscle

The residue for every species at site 19 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------- M ------S--- Site 540
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- M ------T--- Site 547
Penicillium.marneffei.IME2 ---------- M ------A--- Site 593
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- M ------S--- Site 592
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- M ------A--- Site 595
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- M ------S--- Site 269
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- M ------A--- Site 1
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---------- M ------P--- Site 4
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- M ------N--- Site 561
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- M ------A--- Site 567
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------- M ------S--- Site 540
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- M ------S--- Site 591
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- M ------R--- Site 284
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- M ------E--- Site 552
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- M ------D--- Site 591
Candida.parapsilosis.IME2 ---------- M ------P--- Site 585
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- M ---------- Site 725
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------- M ------S--- Site 299
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- M ------S--- Site 591
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- M ------S--- Site 565
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- M ------R--- Site 284
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- M ------A--- Site 595
Species Residue at Site 19
in 'msaprobs'
muscle

The residue for every species at site 19 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- M ------D--- Site 280
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- M ------S--- Site 565
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- M ------S--- Site 584
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- M ------S--- Site 592
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- M ------A--- Site 317
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- M ------P--- Site 566
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- E ---------- Site 724
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- M ------S--- Site 549
Candida.orthopsilosis.IME2 ---------- M ------S--- Site 585
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- M ------A--- Site 599
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- M ------A--- Site 591
Debaryomyces.hansenii.IME2 ---------- M ------M--- Site 561
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- M ------S--- Site 545
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- M ------G--- Site 554
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- M ------P--- Site 596
Caenorhabditis.briggsae.CDK1 ---------- M ------T--- Site 591
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- M ------T--- Site 580
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- M ------G--- Site 250
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- M ------D--- Site 598
Monosiga.brevicollis.CDK1 ---------- M ------A--- Site 604
Saccharomyces.cerevisiae.SKY1 ---------- M ------G--- Site 273
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- M ------A--- Site 600
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------- M ------S--- Site 544
Species Residue at Site 19
in 'msaprobs'
muscle

The residue for every species at site 19 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- M ------E--- Site 721
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- M ------C--- Site 598
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- M ------R--- Site 604
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- M ------K--- Site 598
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- M ------E--- Site 281
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- M ------E--- Site 598
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- M ------G--- Site 569
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- M ------S--- Site 591
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- M ------S--- Site 592
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- M ------S--- Site 583
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- M ------A--- Site 546
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------- M ------S--- Site 540
Saccharomyces.cerevisiae.CDK1 ---------- M ------S--- Site 603
Lodderomyces.elongisporus.IME2 ---------- M ------S--- Site 584
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- M ------S--- Site 592
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- M ------P--- Site 280
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- M ------K--- Site 598
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- M ------K--- Site 333
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- M ------A--- Site 586
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- M ------R--- Site 284
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - ----------  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------- M ------S--- Site 299
Species Residue at Site 19
in 'msaprobs'
muscle

The residue for every species at site 19 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- M ------D--- Site 593
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- M ---------- Site 724
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- M ------A--- Site 584
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- M ------E--- Site 593
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- M ------E--- Site 98
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------- M ------S--- Site 542
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- M ------L--- Site 588
Aspergillus.fumigatus.IME2 ---------- M ------T--- Site 587
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- M ------G--- Site 591
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- M ------N--- Site 592
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------- M ------P--- Site 256
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------- M ------A--- Site 231
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- M ------A--- Site 581
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- M ------K--- Site 253
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- M ------A--- Site 567
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- M ------T--- Site 593
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- E ------M--- Site 590
Candida.glabrata.IME2 ---------- M ------F--- Site 547
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- M ------K--- Site 586
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- M ------N--- Site 592
Species Residue at Site 19
in 'msaprobs'
muscle

The residue for every species at site 19 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- M ------A--- Site 600
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- M ------A--- Site 594
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- M ------N--- Site 304
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- M ------P--- Site 286
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- M ------N--- Site 566
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- M ------A--- Site 595
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- M ------N--- Site 561
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- A ---------- Site 568
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- M ------P--- Site 142
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- M ------H--- Site 284
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------- M ------A--- Site 551
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- M ------S--- Site 593
Lachancea.thermotolerans.SKY1 ---------- M ------G--- Site 303
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- M ------A--- Site 596
Dictyostelium.discoideum.CDK1 ---------- M ------E--- Site 601
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- M ------S--- Site 590
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U --LKIIFLIG M ------A--- Site 239
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- M ------S--- Site 565
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 19
in 'msaprobs'
muscle

The residue for every species at site 19 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- M ------E--- Site 603
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- M ------G--- Site 334
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- M ------S--- Site 598
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- M ------H--- Site 284
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------- M ------S--- Site 542
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- M ------A--- Site 565
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- M ------M--- Site 291
Encephalitozoon.cuniculi.CDK1 ---------- M ---------- Site 725
Saccharomyces.kluyveri.IME2 ---------- M ------V--- Site 335
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- M ------R--- Site 284
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- M ------A--- Site 588
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- M ------G--- Site 334
Cryptococcus.neoformans.IME2 ---------- M ------T--- Site 227
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- M ------S--- Site 600
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- M ------E--- Site 336
Candida.lusitaniae.IME2 ---------- M ------R--- Site 546
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---------- M ------A--- Site 239
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- M ------D--- Site 588
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- M ------V--- Site 723
Species Residue at Site 19
in 'msaprobs'
muscle

The residue for every species at site 19 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- M ------S--- Site 565
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------- M ------A--- Site 551
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 ---------- M ------L--- Site 560
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- M ------R--- Site 270
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- M ------A--- Site 599
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- M ------C--- Site 292
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- M ------A--- Site 548
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- M ------T--- Site 584
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- M ------A--- Site 599
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- M ------A--- Site 596
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------- M ------A--- Site 231
Acyrthosiphon.pisum.CDK1 ---------- M ------Q--- Site 586
Candida.tropicalis.CDK1 ---------- M ------M--- Site 583
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- M ------D--- Site 591
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------- M ------S--- Site 550
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- M ------T--- Site 565
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- M ------D--- Site 280
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- M ------I--- Site 315
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- M ------K--- Site 253
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- R ----AMN--- Site 590
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- M ------S--- Site 321
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- M ------G--- Site 586
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- M ------S--- Site 542
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- M ------E--- Site 594
Species Residue at Site 19
in 'msaprobs'
muscle

The residue for every species at site 19 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- M ------K--- Site 562
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- M ------S--- Site 565
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---------- M ------A--- Site 234
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- M ------G--- Site 191
Candida.dubliniensis.IME2 ---------- M ------S--- Site 584
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- M ------S--- Site 591
Aspergillus.niger.IME2 ---------- M ------T--- Site 587
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- M ------S--- Site 592
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- M ------C--- Site 292
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- M ------S--- Site 565
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- M ------N--- Site 179
Schizosaccharomyces.japonicus.IME2 ---------- M ------P--- Site 585
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- M ------E--- Site 310
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- M ------S--- Site 584
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- M ------S--- Site 559
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- M ------N--- Site 561
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- M ------S--- Site 590
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- M ------P--- Site 555
Kluyveromyces.waltii.IME2 ---------- M ------G--- Site 562
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 ---------- M ------V--- Site 584
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 19
in 'msaprobs'
muscle

The residue for every species at site 19 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- M ------E--- Site 600
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- M ------P--- Site 564
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- M ------A--- Site 596
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- M ------E--- Site 598
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- M ------T--- Site 276
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- M ------S--- Site 590
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- M ------N--- Site 591
Candida.albicans.IME2 ---------- M ------S--- Site 584
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- M ------S--- Site 602
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- M ------S--- Site 553
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- M ------S--- Site 593
Kluyveromyces.lactis.IME2 ---------- M ------P--- Site 565
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------- M ------A--- Site 551
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------- M ------S--- Site 540
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- M ------S--- Site 593
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- M ------D--- Site 591
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- M ------S--- Site 593
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U LTPSPGRGSP M ------E--- Site 603
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- M ------V--- Site 106
Neurospora.crassa.IME2 ---------- M ------T--- Site 585
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- M ------T--- Site 92
Species Residue at Site 19
in 'msaprobs'
muscle

The residue for every species at site 19 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- M ---------- Site 724
Hydra.magnipapillata.CDK1 ---------- M AVPNDMK--- Site 597
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- M ------A--- Site 559
Ashbya.gossypii.IME2 ---------- M ------K--- Site 560
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- M ------E--- Site 102
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- M ------G--- Site 236
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- M ------N--- Site 559
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- M ------N--- Site 598
Schizosaccharomyces.pombe.b.IME2 ---------- M ------S--- Site 595
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- M ------A--- Site 590
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---------- M ------A--- Site 235
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- M ------P--- Site 247
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- M ------E--- Site 602
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- M ------S--- Site 591
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 ---------- M ------P--- Site 587
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- M ------Y--- Site 548
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- M ------D--- Site 586
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- M ------A--- Site 563
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- M ------N--- Site 566
Species Residue at Site 19
in 'msaprobs'
muscle

The residue for every species at site 19 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- M ------N--- Site 136
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- M ------S--- Site 293
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 19:14, July 4th 2020
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