cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 1899 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1899 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1899 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1899 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1899
in 'msaprobs'
muscle

The residue for every species at site 1899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 --------DK P FSYNSVRDIM Site 1072
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD --------YR G MPITLVKTLM Site 1065
Danio.rerio.CDK1 --------VS G ISLPLVKSYL Site 1072
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------Q A LSEEHCQYFL Site 1065
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------G D LDPEIVKSFM Site 1065
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------G K LHAPEVSALF Site 1065
Candida.guilliermondii.IME2 --------GK R FTASTVRSIL Site 1065
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------R K FSLKTVLMLA Site 1065
Chlamydomonas.reinhardtii.LF4 ---------H Y VAEERIKNYM Site 1065
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -R-----RRK S IPNLSIKLYA Site 1065
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------R H FTIKTVLMLV Site 1065
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------R R FSVKTVVQVA Site 1058
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -ASKANKKPV Q LPRGMVKSLL Site 1065
Schizosaccharomyces.octosporus.b.IME2 --------GK P FTKYTACHIL Site 1072
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- N LSDDHIQYFI Site 1058
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------P T LTDYDIRYYI Site 1065
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------R K FSLKTVLMIA Site 1065
Suberites.domuncula.JNK..Stress.activated.protein. ---------- E LDHDRMSYLL Site 1065
Homo.sapiens.CLK3..Dual.specificity.protein.kinase --------FQ P YPLPHVRHMA Site 1072
Aedes.aegypti.CDK1 -P------EK M MDSDLVKSYM Site 1072
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci --------FL P FRMDHIRKMA Site 1072
Homo.sapiens.CLK2..Dual.specificity.protein.kinase --------YL P YPIHQVRHMA Site 1072
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos --------FQ G FSLSIVRRFT Site 1072
Homo.sapiens.HIPK1..Homeodomain.interacting.protei --------FS P LPLKYIRPIL Site 1072
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------R G VPEQLVRSIT Site 1065
Species Residue at Site 1899
in 'msaprobs'
muscle

The residue for every species at site 1899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -R-----EEK L MDLNILKKMV Site 1065
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------Q I LTDFDIRFYM Site 1065
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- R LSNDHICYFL Site 1058
Strongylocentrotus.purpuratus.CDK1 --------PS G LPPGLVKSYL Site 1072
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------R R FSLKTVLMLA Site 1065
Drosophila.melanogaster.CDK1 -V------DK H MESELVRSYL Site 1058
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------R K FTLKTVLMIA Site 1072
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------R K FSLKTVLMLG Site 1065
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH --------YK G LKLNKVREIC Site 1072
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------N L MSMHNVKIFM Site 1065
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------G G LNAFNIKLFL Site 1065
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------- E LDHERMSYLL Site 1065
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------N G LDYQVVQKYL Site 1065
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------- E LDHERMSYLL Site 1065
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- E FSEEKIQYLV Site 1065
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------Q P LSSDHVKVFL Site 1065
Bombus.terrestris.CDK1 ---------G G LDQALVKSYL Site 1065
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 --------YQ G LPLPCVKKII Site 1072
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------N G LDYSRVRKYL Site 1065
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- E LDHERMSYLL Site 1065
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---------V H FSEDHIKSFM Site 1065
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------H P LSEKKIMLYM Site 1072
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -R-----RMT N PPLILVKVFM Site 1065
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -R-----RQV A PPPILIKVFL Site 1065
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------R H FTIKTVLMLV Site 1072
Species Residue at Site 1899
in 'msaprobs'
muscle

The residue for every species at site 1899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------R K LSLKSVLMLA Site 1065
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO --------FS P LPLKYIRPIL Site 1072
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------P T LTDYDIRYYI Site 1065
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------Q P LSSDHVKVFL Site 1065
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------R G VPEHLVKSIT Site 1065
Homo.sapiens.HIPK3..Homeodomain.interacting.protei --------FS P LPLKVIRPIL Site 1072
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------Q P FLPGEVKTLM Site 1072
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------N G ALPDKVRSYI Site 1065
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci --------YL P YPIHQVRHMA Site 1072
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------Q P FLPGEVKTLM Site 1072
Naegleria.gruberi.LF4 ---------K Y FPEHQLKSYM Site 1065
Saccharomyces.bayanus.IME2 --------RR V FSIPSLKSIL Site 1072
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------Q I LTDFDIRFYM Site 1065
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- R LSEERVQYLV Site 1072
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------I I LKPADIKSYM Site 1065
Dictyostelium.discoideum.DYRK1..Probable.serine.th --------FH G VSLNLIKKFA Site 1072
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos --------FR G VSLNLTRKLA Site 1072
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos --------FQ G FSLPLVRKFA Site 1072
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------N G VPPEKVKSYI Site 1065
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------R L LKDIHKRCIF Site 1065
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- T VKPLDRKAYW Site 1065
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos --------FH G FNLSIVRRFT Site 1072
Aspergillus.nidulans.IME2 --------HK Y LDGKHVKSIL Site 1065
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------N S LSFQEVREYM Site 1065
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------Q A LTPDHVKVFV Site 1065
Species Residue at Site 1899
in 'msaprobs'
muscle

The residue for every species at site 1899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------K L FPESVIRNIM Site 1065
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep --------LT G IPLPLIKSYL Site 1072
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------- E LDHERMSYLL Site 1065
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -K-----LNQ R MPLIYVKLYT Site 1065
Penicillium.marneffei.IME2 --------HK Y LEAKHVKSIL Site 1065
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- K LTDDHVQFLI Site 1065
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- T LAEEHAKLFM Site 1072
Drosophila.melanogaster.MAK ---------T H LPEPELKSIL Site 1065
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -R------NV G LSIKAVRLYA Site 1065
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -K------DV G LHIKAVRSYS Site 1058
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---------V H FSEDHIKSFM Site 1065
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -E-----NGS H FSDATIKSLI Site 1072
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------T P FSEAQVKCIM Site 1072
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------- E LDHERMSYLL Site 1065
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- E LDHERMSYLL Site 1065
Homo.sapiens.CLK1..Dual.specificity.protein.kinase --------FL P FRLDHIRKMA Site 1072
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------N S LSFQEVREYM Site 1065
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------R H FTIKTVLMLV Site 1072
Candida.parapsilosis.IME2 --------GT R FSSMTLRSIL Site 1065
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -RS----RTR Q IPPSILKSIL Site 1065
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -K-----AKL T IPILYVKVYM Site 1072
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- E LDHERMSYLL Site 1065
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------Q T LTDYDIRFYM Site 1065
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U --------FL P FHINDIRNMA Site 1072
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- T LTEDHAKLFM Site 1072
Species Residue at Site 1899
in 'msaprobs'
muscle

The residue for every species at site 1899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------N V INMHNVKLFL Site 1065
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------Q T LTDYDIRFYM Site 1065
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -HP----ERK P IPEYTLKSIL Site 1065
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- H LSEDKVQYLV Site 1065
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos --------FR G VSLNLTRKLA Site 1072
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------Q T LSDYDIRYYL Site 1065
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -K-----SKI P LPLLYVKLYL Site 1072
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -M-----SKQ P VPNIFVKLYI Site 1072
Candida.orthopsilosis.IME2 --------GT R FSSMTLRSIL Site 1065
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------L V LTPANIKAYI Site 1065
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- D LDHERLSYLL Site 1065
Debaryomyces.hansenii.IME2 --------RI K FSPATLKSVL Site 1072
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -K-----NNQ R MPNLFVKLYA Site 1065
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -HP----EKR L IAPRMLKSIM Site 1065
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -P-----VDM M LPQEYVKSFM Site 1076
Caenorhabditis.briggsae.CDK1 -K------EE Y LPSETLKSYT Site 1072
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------Q T LTDYEIRYYL Site 1065
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------R P LAPAQVKSYL Site 1072
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos --------FQ G FSVQLVRKFA Site 1072
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. --------EP G VPTETIKDMM Site 1072
Monosiga.brevicollis.CDK1 -S------GK Y MDKDLVKSYT Site 1072
Saccharomyces.cerevisiae.SKY1 --------HR G IPLIYVKQIS Site 1072
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- Q LSDDHCQYFV Site 1065
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------R G LPTARVRPCL Site 1072
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -K-----TKQ T IPINFIRLYM Site 1072
Species Residue at Site 1899
in 'msaprobs'
muscle

The residue for every species at site 1899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------R K FSLKTVLMTA Site 1065
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------G L LQDVHVRSIF Site 1073
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------N G LDYQVVQKYL Site 1065
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------K P FKLSEIKCFL Site 1065
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------N G VPPEKVKSYI Site 1065
Ajellomyces.capsulatus.CDK1 MN------RL G LGEAMVKKFM Site 1082
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------Q P LSDDHCQYFV Site 1065
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep --------EP G VPTETIKDMM Site 1072
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------T P FSEAQVKCIV Site 1072
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- E LDHERMSYLL Site 1065
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- E FSEDKVQYLV Site 1065
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO --------KS G MSPPTIQRLS Site 1072
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------Q P LSSDHIKVFL Site 1065
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------- E LDHERMSYLL Site 1065
Saccharomyces.cerevisiae.CDK1 -K------DQ P LGADIVKKFM Site 1072
Lodderomyces.elongisporus.IME2 --------NM R FSQTTLKSIL Site 1065
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- K LTDDHVQFLI Site 1065
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un --------YF P YPIHQVRHMA Site 1072
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------N G VPPEKVKSYI Site 1072
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -S-----LHQ P MDRYEIKIYM Site 1072
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------N V LKDVHKRFVM Site 1072
Homo.sapiens.CLK4..Dual.specificity.protein.kinase --------FL P FQIDHIRQMA Site 1072
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U --------FS P LPLKYIRPVL Site 1072
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------R G VPEPLVKNIT Site 1065
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -K-----AKL I TPIIYIKVYM Site 1072
Species Residue at Site 1899
in 'msaprobs'
muscle

The residue for every species at site 1899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -K------DE Y LPLETLKSYT Site 1058
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep --------PP G LPAETIKDLM Site 1065
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -QT----ARA S IPPSTLRRLL Site 1065
Salmo.salar.CDK1 --------VS G IALPLVKSYL Site 1072
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------L V LTPAHIKSYM Site 1065
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------R P LAQAQVKSYL Site 1072
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- S IDPWERKSYW Site 1065
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -R-----AKQ T LPVIYVKLYM Site 1072
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -K-----AKK I IDSEWMQNVL Site 1065
Aspergillus.fumigatus.IME2 --------HK Y LEGKHVKSIL Site 1065
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -ASKANKKPL Q LPRGMVKSLL Site 1065
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha --------FL P YPLQQIRLMA Site 1072
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- E FSDEKIQYLV Site 1065
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------Q T LTIDHVKVFV Site 1065
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma --------FS P LPLKYIRPVL Site 1072
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- Q LSNDHICYFL Site 1058
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------N I MSMHNVKLFL Site 1065
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------T P FSEAQVKCIV Site 1072
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------R G VPEHMVKSII Site 1065
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- D LDHDRMSYLL Site 1065
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- K QSDDKVQYLI Site 1072
Candida.glabrata.IME2 --------KR V FSIPSLKSIL Site 1072
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------K L FPESVIRNIM Site 1065
Schizosaccharomyces.pombe.IME2 --------ND P LTLEQVQDIM Site 1065
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- K LTDDHIQYFI Site 1072
Species Residue at Site 1899
in 'msaprobs'
muscle

The residue for every species at site 1899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------G D IDMAVCRSFM Site 1072
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom --------FA P LPARHIRTVT Site 1072
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------R R FTMKTVLMLA Site 1065
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------N L MNMHNVKIFM Site 1065
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------N G VSDGVIKSVL Site 1065
Branchiostoma.floridae.CDK1 --------PS G LPTELVKSYV Site 1072
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara --------YL P YPIHQVRHMA Site 1072
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -R-----QKL S MPMLEVKLYI Site 1072
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------K R ISGEKCREIT Site 1065
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -K-----QRQ S IPMIYVKLYM Site 1072
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------T P FSEAQVKCII Site 1072
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------K L FPESAIRNIM Site 1065
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci --------FQ P YPLPHVRHMA Site 1072
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos --------FR G VSLNLTRKFA Site 1072
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep --------LT G IPLPLIKSYL Site 1072
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------Q P LTLEHVRYFL Site 1065
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- K LTDDHVQFLI Site 1065
Lachancea.thermotolerans.SKY1 --------HR G IPVMYVKQIA Site 1065
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- P LLEEHARLFM Site 1072
Dictyostelium.discoideum.CDK1 ---------P A LCPQLIKSYL Site 1065
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- T LSEDRIQFLV Site 1072
Xenopus.tropicalis.IME2 --------IS G ISLALVKSYL Site 1072
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U --------FS P LPLKYIRPIL Site 1072
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------Q T LTDYDIRFYM Site 1065
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d --------IS G ISLALVKSYL Site 1072
Species Residue at Site 1899
in 'msaprobs'
muscle

The residue for every species at site 1899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara --------TG E FPLSLVKNYL Site 1072
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------G G LHPHNVRLFM Site 1072
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------I - LEEIHKQYTI  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos --------FR G VSLNLTRKFA Site 1072
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -R-----AKQ T LPVIYVKLYM Site 1072
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -R-----AKQ T LPVNFVRLYM Site 1072
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------K P FLEEQVKCLM Site 1065
Encephalitozoon.cuniculi.CDK1 -D-----EGR L VEEGFVRKMS Site 1065
Saccharomyces.kluyveri.IME2 --------RN V FSLPTLKSIL Site 1072
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci --------FL P FQIDHIRQMA Site 1072
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- H LSNDHICYFL Site 1058
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------G G LHPHNVRLFM Site 1072
Cryptococcus.neoformans.IME2 --------GR P LAAGLIASCF Site 1072
Homo.sapiens.HIPK4..Homeodomain.interacting.protei --------FA P LPARHIRTVT Site 1072
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote --------YQ G LPLPCVKKII Site 1072
Candida.lusitaniae.IME2 --------GR P LSSKIVKGML Site 1072
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom --------FS P LPLKYIRPIL Site 1072
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -AAKATKKPV M VPKGMVKSLL Site 1074
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------R P LTASQVKSYM Site 1072
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------R G VPEQQVKSIM Site 1065
Gallus.gallus.CDK2 --------LG G IALPLIKSYL Site 1072
Emericella.nidulans.CDK1 SR------NL G LGDAMVKKFM Site 1082
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------Y P LSEKKIMHYM Site 1065
Homo.sapiens.CDK1 -P------GQ Y MDSSLVKSYL Site 1072
Candida.albicans.CDK1 -Q------GV G LGANMIKRFM Site 1058
Species Residue at Site 1899
in 'msaprobs'
muscle

The residue for every species at site 1899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------Q T LSDYDIRFYM Site 1065
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------Q P LTLEHVRYFL Site 1065
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------K L FPESAIRNIM Site 1065
Saccharomyces.castelli.IME2 --------KR V FSIPSLKSIL Site 1072
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec --------FQ P FPIEHIRIMA Site 1072
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------L V LTPSHIKAYM Site 1065
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------G G LHPDNVKLFL Site 1065
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -K-----SAQ R MPDVLVKLYT Site 1065
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------R D LPIKGIKKYI Site 1065
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------L V LTPANIKAYI Site 1065
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------V K FTLSEIKRVM Site 1065
Homo.sapiens.HIPK2..Homeodomain.interacting.protei --------FS P LPLKYIRPVL Site 1072
Acyrthosiphon.pisum.CDK1 -KE----FGF G LPEPQIKSYL Site 1065
Candida.tropicalis.CDK1 --------NI K FSPVTLKSIL Site 1065
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -AAKATKKQV V VPRGMVKSLL Site 1068
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -K-----AKQ I IPLLYIKLYM Site 1072
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------Q T LSDYDIRYYL Site 1065
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------N I INMHNVKLFL Site 1065
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------P T LTDYDIRYYI Site 1065
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------N I MSMHNVKLFL Site 1065
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- E FSDEKIQYLV Site 1065
Candida.albicans.SSN3..Serine.threonine.protein.ki -HP----DFK P IPCPTIKSLI Site 1072
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------H Y LAEDRVKTYM Site 1065
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -K-----AKQ T ISLIYVKLYM Site 1072
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- L LTEDRIQFLV Site 1072
Species Residue at Site 1899
in 'msaprobs'
muscle

The residue for every species at site 1899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------V K FTEPQIKCYM Site 1058
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------Q T LTDYDIRFYM Site 1065
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U --------FS P LPLKVIRAIL Site 1072
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------Q P FLPGEVKTLM Site 1065
Candida.dubliniensis.IME2 --------NI K FSPVTLKSIL Site 1065
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- E LDHERMSYLL Site 1065
Aspergillus.niger.IME2 --------HK P FDGKHVKSIL Site 1065
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- K LTDDHVQFLI Site 1065
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------H G LESKRLRKYL Site 1065
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------G G LHPDNVKLFL Site 1072
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------Q T LTDYDIRFYM Site 1065
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty --------FR G VSLNLARKFA Site 1072
Schizosaccharomyces.japonicus.IME2 --------LI P FSIDAVKDLV Site 1072
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- D LDHERLSYLL Site 1065
Gallus.gallus.CDK1 -S------GQ Y LDRSRVKSYL Site 1058
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------G D LDPEIVKSFL Site 1072
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -K-----MKT T MPILEVKLYI Site 1065
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------K V IPEKQAKHII Site 1065
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -K-----QRQ Q IPMIYVKLYM Site 1072
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- K LGEDRIQFLV Site 1072
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------P T FKLPDIQYYF Site 1065
Kluyveromyces.waltii.IME2 --------KR V FSLPSLKSIL Site 1065
Debaryomyces.hansenii.SKY1 --------HR G IPVVFVKQIA Site 1072
Saccharomyces.cerevisiae.IME2 --------RR V FSIPSLKSIL Site 1065
Schizosaccharomyces.japonicus.b.IME2 --------GR Q FSVPTVREML Site 1065
Species Residue at Site 1899
in 'msaprobs'
muscle

The residue for every species at site 1899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un --------DP G VPSEIIKDMM Site 1065
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------Q I LTDFDIRFYM Site 1065
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- P LLEEHARLFM Site 1072
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep --------EP G VPTETIKDMM Site 1072
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -N-----LKM Q MPRVEIKFYA Site 1065
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- K LSEDRIQFLV Site 1072
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------H G LESKRLRKYL Site 1065
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- E LDHERLSYLL Site 1065
Candida.albicans.IME2 --------NI K FSPVTLKSIL Site 1065
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d --------PP G LPLETIKDLM Site 1072
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------K P FLPSEIKTLI Site 1065
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- K LTDDHVQFLI Site 1065
Kluyveromyces.lactis.IME2 --------RR V FSLPTLRSIL Site 1072
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------Q P LTLEHVRYFL Site 1065
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------- E LDHERMSYLL Site 1065
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- A LSDEHVQFLV Site 1065
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------R H FTIKTVLMLV Site 1072
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- A LSDEHVQFLV Site 1065
Amphimedon.queenslandica.CDK1 ---------- - -PTGIPTDYL  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------N G VADGVIKSVL Site 1065
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U --------AG E LPLSLVKNYL Site 1072
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -N-----RKQ S FFPGEVKCLT Site 1072
Neurospora.crassa.IME2 --------HK C LDNSSVKSIL Site 1072
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------G E IDMAVCRSFM Site 1072
Dictyostelium.discoideum.DYRK2..Probable.serine.th --------FQ G YNLNLVRRFG Site 1072
Species Residue at Site 1899
in 'msaprobs'
muscle

The residue for every species at site 1899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep --------PP G LPVETIKDLM Site 1072
Hydra.magnipapillata.CDK1 --------KE G IKMNQIKSYT Site 1072
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------T P FSEAQVKCII Site 1072
Ashbya.gossypii.IME2 --------RR V FSLPTLRSIL Site 1072
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- S INPWERKSYW Site 1065
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos --------FQ G FSVQLVRKFA Site 1072
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -H-----QRT P MSRLEIKYYM Site 1072
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------N L LKDIHKRYVM Site 1067
Schizosaccharomyces.pombe.b.IME2 --------GR L FTKETAFNIL Site 1065
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- H LSNDHICYFL Site 1072
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom --------FS P LPLKVIRPVL Site 1072
Schizosaccharomyces.pombe.CDK1 -ET----GAT S LDPRLVQKFT Site 1065
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch --------YL P YSIGQVRHMA Site 1072
Saccoglossus.kowalevskii.CDK1 --------PS G LPLPLVKSYL Site 1072
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------R K FSLKTVLLLA Site 1072
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- E LDHERMSYLL Site 1065
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep --------TS E LPLPVVKSYL Site 1072
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -K-----LKA V VDTEWMHTML Site 1072
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep --------GS E LPLHLIKSYL Site 1065
Yarrowia.lipolytica.IME2 --------KV P FQPHAVRSML Site 1072
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -HP----EKR M IPPRMVRSIM Site 1065
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli --------VT G ISLPLVKSYL Site 1072
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------R D MPIKGIKKYM Site 1065
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -K-----MKT T MPILEVKLYT Site 1072
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -R-----QKL S MPMLEVKLYI Site 1072
Species Residue at Site 1899
in 'msaprobs'
muscle

The residue for every species at site 1899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro --------FR G VSLNLARKFA Site 1072
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------Q P LSSDHVKVFL Site 1065
Scheffersomyces.stipitis.SKY1 --------HR G IPIVFVKQIA Site 1072
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------G D LDPEIVKSFL Site 1065

Generated by PhyloBot at 10:47, February 29th 2020
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