cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1842 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1842 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1842 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1842 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1842
in 'msaprobs'
muscle

The residue for every species at site 1842 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - --S-FCLHIV  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - PNG-RHYCMV  
Danio.rerio.CDK1 ---------- - --E-NKLYLV  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ----R----- - EVF-NDVYIA  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - --D-KKLTLV  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - --D-KKLTLV  
Candida.guilliermondii.IME2 ---------- - -SQ-YCLHFS  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - --G-EYNVMV  
Chlamydomonas.reinhardtii.LF4 ---------- - -PT-GRLALV  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ----P----- S KDE-THLCLL Site 988
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - --K-NFNTLV  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - --G-LHNILV  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - -AD-RKVWLL  
Schizosaccharomyces.octosporus.b.IME2 ---------- - --N-RNIYLV  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- Y ESF-NEIYLI Site 988
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - -HS-KTPSLI  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - --G-DFNVMA  
Suberites.domuncula.JNK..Stress.activated.protein. ----S----- L DDF-QDVYIV Site 988
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - --H-GHMCIA  
Aedes.aegypti.CDK1 ---------- - --E-NRLYLI  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - --R-GHICIV  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - --H-GHMCIS  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - --R-NHFCIT  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---------- - --K-NHTCLV  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - --K-RKLHLV  
Species Residue at Site 1842
in 'msaprobs'
muscle

The residue for every species at site 1842 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - --I-NKMYLV  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - -VS-KTPALV  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ----I----- - DQM-RDVYIV  
Strongylocentrotus.purpuratus.CDK1 ---------- - --D-KKLYLV  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - --G-DENILV  
Drosophila.melanogaster.CDK1 ---------- - --E-NRIYLI  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - --G-DYNVMV  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - --G-DYNIMV  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - PNG-QHLCMV  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - --D-RSLTLV  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- - --K-ETLTFV  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ----S----- L EEF-QDVYLV Site 988
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - --K-KRWYLV  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ----S----- L EEF-QDVYLV Site 988
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ----S----- L RNF-YDFYLV Site 988
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- I DYF-EEIYVV Site 988
Bombus.terrestris.CDK1 ---------- - --D-NHLYLV  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - VNG-THICMV  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - --K-KRWYLV  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ----S----- L EEF-QDLYIV Site 988
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d --DAL---DF K KDK-GAFYLV Site 988
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - -KS-GSLALI  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---GE----G R RND-VYLNVV Site 990
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ----E----R D RRD-IYLNVV Site 990
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - --K-NFNTLV  
Species Residue at Site 1842
in 'msaprobs'
muscle

The residue for every species at site 1842 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - --G-DYNVLV  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------- - --K-NHTCLV  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - -HS-KTPSLI  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- I DYF-EEIYVV Site 988
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - --K-RRLHLV  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---------- - --R-NHTCLV  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- - -NM-DKIYIV  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - --R-GKLYLV  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - --H-GHMCIS  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- - -NM-DKIYIV  
Naegleria.gruberi.LF4 ---------- - -KN-GNLALV  
Saccharomyces.bayanus.IME2 ---------- - -EN-YQLHIV  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - -VS-KTPALV  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ----S----- L DRF-HDFYLV Site 988
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - --K-SNVYLV  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - --R-NHLCIV  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - --R-NHLCLV  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - --R-NHICMT  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - --R-GKLYLV  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - -ND-RDIYLV  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - --S-SYIYML  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - --R-NHLCIT  
Aspergillus.nidulans.IME2 ---------- - -LT-RKLHIA  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - --N-DHVVIA  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- P SFF-QELYVL Site 989
Species Residue at Site 1842
in 'msaprobs'
muscle

The residue for every species at site 1842 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - --N-DHLYFV  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - --E-NKLYLV  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ----S----- L EEF-QDVYLV Site 988
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- E KDE-LYLNLV Site 990
Penicillium.marneffei.IME2 ---------- - -LS-KKLHIC  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ----S----- L EGF-NDVYLV Site 988
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ----TDLQGE L FKF-SVAYIV Site 988
Drosophila.melanogaster.MAK ---------- - --N-DTLYFV  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - --K-NHLCMV  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - --K-QHLCLV  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de --DAL---DF K KDK-GAFYLV Site 988
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - -KD-KLLYLI  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - -HL-ESIFLV  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ----T----- L EEF-QDVYLV Site 988
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ----T----- L EEF-QDVYLV Site 988
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - --H-GHICIV  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - --N-DHVVIA  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - --K-NFNTLV  
Candida.parapsilosis.IME2 ---------- - -LD-HHLHIT  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - --D-GTISMV  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ----E----- K KDE-LYLNLV Site 990
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ----S----- L EEF-QDVYLV Site 988
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - -VS-RTPALV  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - --H-GHVCIV  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ----SDLQGE L FKF-SVAYIV Site 988
Species Residue at Site 1842
in 'msaprobs'
muscle

The residue for every species at site 1842 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - --E-KSLTLV  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - -VS-RTPALV  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - --D-TCIYMV  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ----S----- F NDF-HNFYLV Site 988
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - --R-NHLCLV  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - -IS-RTPALI  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ----E----- K QDE-LYLNLV Site 990
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- - NDE-VYLNLV  
Candida.orthopsilosis.IME2 ---------- - -LD-HQLHIT  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - --K-SNISLV  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ----E----- V EEF-NDLYIV Site 988
Debaryomyces.hansenii.IME2 ---------- - -KE-FHLHIV  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- D KDE-TYLHLV Site 990
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - --R-KSIYMV  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - --N-SKLYMV  
Caenorhabditis.briggsae.CDK1 ---------- - --E-NRLYLI  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - -VS-RTPALI  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - --G-AGFVLA  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - --R-NHVCMA  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- T DRE-TKLTLV Site 988
Monosiga.brevicollis.CDK1 ---------- - --E-SNLFLV  
Saccharomyces.cerevisiae.SKY1 ---------- - PNG-VHVVMV  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- F SSF-HEVYLI Site 987
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - --K-RRLYLV  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ----E----- K RDE-VFLNLV Site 990
Species Residue at Site 1842
in 'msaprobs'
muscle

The residue for every species at site 1842 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - --G-DFTIMV  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - -ND-RDIYLV  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - --K-KRWYLV  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - -TG-DKIYLV  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - --R-GKLYLV  
Ajellomyces.capsulatus.CDK1 ---------- - --DGHKLYLV  
Dictystelium.discoideum.MAPK3..Extracellular.signa ----K----- - EQF-EDVYIV  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- T DRE-TKLTLV Site 988
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - -HL-ESIFLV  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ----S----- L EEF-QDVYIV Site 988
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ----S----- L RSF-HDFYLV Site 988
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- R DGQ-LLILLA Site 990
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- I DCF-EEIYVI Site 988
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ----S----- L EEF-QDVYLV Site 988
Saccharomyces.cerevisiae.CDK1 ---------- - --DAHKLYLV  
Lodderomyces.elongisporus.IME2 ---------- - -LN-HQLHIS  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ----S----- L KEF-NDVYLV Site 988
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - --H-GHMCIS  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - --R-GKLYLV  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - DQE-LYLNLI  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - -NN-LDFYLV  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - --H-GHVCIV  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - --K-NHTCLV  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - --K-RRLHLV  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ----E----- K KDE-LYLNLV Site 990
Species Residue at Site 1842
in 'msaprobs'
muscle

The residue for every species at site 1842 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - --E-NRLFLI  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- T DRE-IKVTLV Site 990
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - --D-KSIYMV  
Salmo.salar.CDK1 ---------- - --E-NKLYLV  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - --K-SNISLV  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - --G-GGFVLA  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - --D-QYIYMV  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ----E----- K KDE-VYLNLV Site 990
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ----G----- E ISS-LYLCLV Site 990
Aspergillus.fumigatus.IME2 ---------- - -LS-RKLHIC  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - -AD-RKVWLL  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - --N-GHICIS  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ----S----- Y HGF-QDFYLV Site 988
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S HGTAL---LE G RKE-TITYVL Site 1029
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------- - --K-NHTCLV  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ----L----- - EAM-RDVYIV  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - --D-KSLTLV  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - -HL-ESIFLV  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - --K-RKLHLV  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ----N----- L EEF-QDVYLV Site 988
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ----T----- L DQF-QDFYLV Site 988
Candida.glabrata.IME2 ---------- - -EK-YQLHIA  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - --N-DHLYFI  
Schizosaccharomyces.pombe.IME2 ---------- - --F-RCLHIV  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- Y EFF-NEIYLI Site 988
Species Residue at Site 1842
in 'msaprobs'
muscle

The residue for every species at site 1842 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - --E-KKLTLV  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - --A-LKFYLV  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - --K-DYNVLV  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - --D-RSLTLV  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - --K-RKMHLV  
Branchiostoma.floridae.CDK1 ---------- - --E-KKLYLV  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - --H-GHMCIS  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ----D----- N SDE-VYLNLV Site 990
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - --R-RRLFII  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ----D----- K KDE-LYLNLI Site 990
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - -HL-ESIFLV  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - --N-DHLYFI  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - --H-GHMCIA  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - --R-NHLCLV  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - --E-NKLYLV  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ----P----- Y GEF-KSVYVV Site 988
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ----S----- L EEF-NDVYLV Site 988
Lachancea.thermotolerans.SKY1 ---------- - PNG-KHVVMV  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -SQLTDDVGS L TEL-NSVYIV Site 988
Dictyostelium.discoideum.CDK1 ---------- - --Q-NRLYLV  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ----S----- L DDF-TDFYLV Site 988
Xenopus.tropicalis.IME2 ---------- - --E-NKLYLV  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---------- - --K-NHTCLV  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - -VS-RTPALV  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - --E-NKLYLV  
Species Residue at Site 1842
in 'msaprobs'
muscle

The residue for every species at site 1842 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - --Q-KKLYLV  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - --K-ETLTFV  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - -ND-RDIYLV  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - --R-NHLCLV  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ----E----- K KDE-VYLNLV Site 990
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ----E----- K RDE-VYLNLV Site 990
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - -QL-ESLFLV  
Encephalitozoon.cuniculi.CDK1 ---------- - --N-NKMYLV  
Saccharomyces.kluyveri.IME2 ---------- - -AQ-YQLHIV  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - --H-GHVCIV  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ----I----- - EQM-KDVYIV  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - --K-ETLTFV  
Cryptococcus.neoformans.IME2 ---------- - -KS-RELYFV  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - --A-LKFYLV  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - VNG-THICMV  
Candida.lusitaniae.IME2 ---------- - -TS-GKLNIV  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---------- - --K-NHTCLV  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - -TD-RKVWLL  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - --G-TGFVLV  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - --K-RKLHLV  
Gallus.gallus.CDK2 ---------- - --E-NKLYLV  
Emericella.nidulans.CDK1 ---------- - --DGHKLYLV  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - -KS-GSLALI  
Homo.sapiens.CDK1 ---------- - --D-SRLYLI  
Candida.albicans.CDK1 ---------- - --DSHKLYLV  
Species Residue at Site 1842
in 'msaprobs'
muscle

The residue for every species at site 1842 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - -VS-RTPALV  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ----P----- Y GEF-RSVYVV Site 988
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - --N-DHLYFI  
Saccharomyces.castelli.IME2 ---------- - -SN-YQLHIV  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - --H-GHVCIS  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - --K-SNISLV  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - --K-ETLTLV  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- E KEE-VYLNLV Site 989
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - --R-DQVIAV  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - --K-SNISL-  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ----S---PY N RCK-GSIYLV Site 988
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------- - --K-NHTCLV  
Acyrthosiphon.pisum.CDK1 ---------- - --D-KKLFLV  
Candida.tropicalis.CDK1 ---------- - -VN-YQLHIS  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - -ND-RKVFLL  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ----D----- K KDE-LYLNLV Site 990
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - -VS-RTPALI  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - --E-KSLTLV  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - -HS-KTPSLI  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - --D-KSLTLV  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ----S----- Y HGF-QDFYLV Site 988
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- - --N-KSIYMV  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - -PT-GRLALV  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ----E----- K KDE-VFLNLV Site 990
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ----R----- L DEF-QDFYLV Site 988
Species Residue at Site 1842
in 'msaprobs'
muscle

The residue for every species at site 1842 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ----D---KK H RRR-GSIYMV Site 988
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - -VS-RTPALV  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---------- - --R-NHTCLV  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- - -NM-DKIYIV  
Candida.dubliniensis.IME2 ---------- - -IQ-YQLHIS  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ----T----- L EEF-QDVYLV Site 988
Aspergillus.niger.IME2 ---------- - -LS-RKLHIC  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ----S----- F EEF-NDVYLV Site 988
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - --K-KKIHLV  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - --K-ETLTLV  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - -VS-RTPALV  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - --R-AHLCLV  
Schizosaccharomyces.japonicus.IME2 ---------- - --K-KHLHMV  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ----K----- L DEF-NDLYIV Site 988
Gallus.gallus.CDK1 ---------- - --D-ARLYLI  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - --D-KKLTLV  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ----E----- R KDE-VYLNLV Site 990
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ----T----- S RNI-IKIAMI Site 990
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ----E----- K KDE-LYLNLI Site 990
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ----T----- L DDF-TDFYLV Site 988
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - -DS-KIPALI  
Kluyveromyces.waltii.IME2 ---------- - -VN-YQLHIV  
Debaryomyces.hansenii.SKY1 ---------- - PNG-VHVVMV  
Saccharomyces.cerevisiae.IME2 ---------- - -EN-YQLHIV  
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1842
in 'msaprobs'
muscle

The residue for every species at site 1842 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- T DRE-TKLTLV Site 988
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - -VS-KTPALV  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -SQLTDDVGS L TEL-NSVYIV Site 988
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- T DRE-TKLTLV Site 988
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- E EDE-VYLNLV Site 989
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ----N----- L DKF-NDFYLV Site 988
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - --K-KKIHLV  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ----T----- L EEF-QDVYLV Site 988
Candida.albicans.IME2 ---------- - -IQ-YQLHIS  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- T DRE-TKVTLV Site 988
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - -NI-NSIFMA  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ----S----- L EEF-NDVYLV Site 988
Kluyveromyces.lactis.IME2 ---------- - -SL-YHLHIV  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ----P----- Y GEF-KSVYVV Site 988
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ----T----- L EEF-QDVYLV Site 988
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ----S----- I EDF-SEVYLV Site 988
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - --K-NFNTLV  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ----S----- I EDF-SEVYLV Site 988
Amphimedon.queenslandica.CDK1 ---------- - --D-RKLFMV  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - --K-RKMHLV  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - --Q-KKLYMV  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- - -NM-DKIFIV  
Neurospora.crassa.IME2 ---------- - -FT-KKLHIA  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - --D-KKLTLV  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - --R-NHLILT  
Species Residue at Site 1842
in 'msaprobs'
muscle

The residue for every species at site 1842 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- T DRD-IKVTLV Site 990
Hydra.magnipapillata.CDK1 ---------- - --Q-ARLFLV  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - -HL-ESIFLV  
Ashbya.gossypii.IME2 ---------- - -SL-YQLHIV  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - --E-QYIYMV  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - --R-NHVCMA  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- S QDE-IYLNLI Site 990
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - -ND-KDIYLI  
Schizosaccharomyces.pombe.b.IME2 ---------- - --Y-RNIFLV  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ----I----- - EQM-KDVYIV  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---------- - --R-NHTCLV  
Schizosaccharomyces.pombe.CDK1 ---------- - --E-SKLYLV  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - --H-GHMCLS  
Saccoglossus.kowalevskii.CDK1 ---------- - --E-KKLYLV  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - --G-DYNVMV  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ----S----- L EEF-QDVYIV Site 988
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - --E-KKLYMV  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ----N----- E ISS-LFLCLV Site 990
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - --E-RKLYLV  
Yarrowia.lipolytica.IME2 ---------- - -VN-HHFHMS  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - --R-KCVHMV  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - --E-NKLYLV  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - --Q-DQVVVV  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ----E----- R KDE-VYLNLV Site 990
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ----D----- N SDE-VYLNLV Site 990
Species Residue at Site 1842
in 'msaprobs'
muscle

The residue for every species at site 1842 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - --R-AHLCLV  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- I DYF-EEIYVV Site 988
Scheffersomyces.stipitis.SKY1 ---------- - PNG-VHVVMV  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - --D-KKLTLV  

Generated by PhyloBot at 15:43, October 23rd 2019
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