cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1777 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1777 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1777 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1777 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1777
in 'msaprobs'
muscle

The residue for every species at site 1777 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 IVN---IFDL Y IDQ------- Site 973
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD VAR---LLDH F THRG------ Site 973
Danio.rerio.CDK1 IVK---LRDV I HT-------- Site 973
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge VVA---IRDI V PPPQ------ Site 973
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d IVR---LHDV L HS-------- Site 973
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK VVR---LLDV L HT-------- Site 973
Candida.guilliermondii.IME2 LLH---IYEV F IDT------- Site 973
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ IPH---LKWF G VE-------- Site 989
Chlamydomonas.reinhardtii.LF4 IIK---LLEV L YDQ------- Site 973
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g IIK---LIAF F HTHN------ Site 973
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 FPR---IRHH G KE-------- Site 990
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 IPQ---EYYF G QE-------- Site 973
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho VIS---LQKV F LSH------- Site 973
Schizosaccharomyces.octosporus.b.IME2 LID---LLET F MDP------- Site 973
Candida.albicans.MAPK3..Extracellular.signal.regul IIS---ILAI Q RPIN------ Site 973
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. IVK---LLDV V RDQ------- Site 973
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 VVGFPTVKWY G QE-------- Site 989
Suberites.domuncula.JNK..Stress.activated.protein. IIG---LKNL F TPAK------ Site 973
Homo.sapiens.CLK3..Dual.specificity.protein.kinase CVL---MSDW F NF-------- Site 973
Aedes.aegypti.CDK1 IVS---LEDV L ME-------- Site 973
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci CVQ---MLEW F EH-------- Site 973
Homo.sapiens.CLK2..Dual.specificity.protein.kinase CVQ---MFDW F DY-------- Site 973
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos VVH---MKDF F YF-------- Site 973
Homo.sapiens.HIPK1..Homeodomain.interacting.protei FVR---SYEC F QH-------- Site 973
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar LVN---LLEV F RR-------- Site 973
Species Residue at Site 1777
in 'msaprobs'
muscle

The residue for every species at site 1777 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 IVS---LDDV I YN-------- Site 973
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. IIK---LIDT V KDP------- Site 973
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM IID---IRDI L RVDS------ Site 973
Strongylocentrotus.purpuratus.CDK1 IVK---LHDV V HS-------- Site 973
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca IAN---IKWC G ID-------- Site 973
Drosophila.melanogaster.CDK1 IVC---LEDV L ME-------- Site 973
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 LPK---LYYY S QE-------- Site 973
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. IPA---VKWF G FD-------- Site 989
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH VVR---LIDH F KHSG------ Site 973
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d IVT---LHDL I HT-------- Site 973
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. IVT---LHDI I HT-------- Site 973
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET IIS---LLNV F TPQK------ Site 973
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 LVN---LLEV C KK-------- Site 973
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U IIS---LLNV F TPQK------ Site 973
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. VIG---LLDV F TPAS------ Site 973
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo VLS---ALDI L QPPH------ Site 973
Bombus.terrestris.CDK1 IVQ---LFDV V DG-------- Site 973
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 VVQ---LLDD F KISG------ Site 973
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar LVS---LLEV Y KK-------- Site 973
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. IIG---LLNV F TPQK------ Site 973
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d VVN---MKEI V TDKQ------ Site 973
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ILA---LHEV V FDR------- Site 973
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. IVM---LKNY F YTVG------ Site 973
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G IVQ---LQSY F YTLG------ Site 973
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 FPR---IRHH G KE-------- Site 973
Species Residue at Site 1777
in 'msaprobs'
muscle

The residue for every species at site 1777 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 VPN---VKWF G VE-------- Site 989
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO FVR---AFEC F QH-------- Site 973
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C IVK---LLDV V RDQ------- Site 973
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl VLS---ALDI L QPPH------ Site 973
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 LVN---LLEV F RR-------- Site 973
Homo.sapiens.HIPK3..Homeodomain.interacting.protei FVR---AYEC F QH-------- Site 973
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O IVT---VREI V VGS------- Site 973
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d IVE---LKEA F RR-------- Site 973
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci CVQ---MFDW F DY-------- Site 973
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O IVT---VREI V VGS------- Site 973
Naegleria.gruberi.LF4 VIS---LLEV V YDP------- Site 973
Saccharomyces.bayanus.IME2 LIQ---IFEV F IDS------- Site 973
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. IIK---LIDT V KDP------- Site 973
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a VIG---LVDV F TADL------ Site 973
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki VVN---LLDI F AH-------- Site 973
Dictyostelium.discoideum.DYRK1..Probable.serine.th IIK---LKHH F KF-------- Site 973
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos IVH---LKRH F MF-------- Site 973
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos VIH---MLEN F TF-------- Site 973
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d IVE---LKEA F RR-------- Site 973
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a IIR---LLDV I PAK------- Site 973
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific IIK---LYDY E IT-------- Site 973
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos VVH---MKDF F YF-------- Site 973
Aspergillus.nidulans.IME2 LVP---ALDI F LDP------- Site 973
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi VMG---LKYC F RK-------- Site 973
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se VLS---LLDI L QPAN------ Site 973
Species Residue at Site 1777
in 'msaprobs'
muscle

The residue for every species at site 1777 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. VIK---LKEV I RE-------- Site 973
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep IVK---LLDV I HT-------- Site 973
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. IIS---LLNV F TPQK------ Site 973
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. VVC---LKHC F FSTT------ Site 973
Penicillium.marneffei.IME2 IVP---ALDI F LDP------- Site 973
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen VIG---LLDV F SPAT------ Site 973
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a IVK---VYEV L GPKG------ Site 973
Drosophila.melanogaster.MAK IVK---LKEV I RE-------- Site 973
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH IIH---YERH F MH-------- Site 973
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr CLR---LFRH F YH-------- Site 973
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de VVN---MKEI V TDKQ------ Site 973
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep IVK---LLDV C LNP------- Site 973
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d IVE---LKEV V VGN------- Site 973
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin IIS---LLNV F TPQK------ Site 973
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a IIS---LLNV F TPQK------ Site 973
Homo.sapiens.CLK1..Dual.specificity.protein.kinase CVQ---MLEW F EH-------- Site 973
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis VMG---VKYC F RK-------- Site 973
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 FPR---IRHH G KE-------- Site 973
Candida.parapsilosis.IME2 LVQ---IFEI F IDD------- Site 973
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p IVS---LVQV L LK-------- Site 973
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen IVR---LRYF F YSSG------ Site 973
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. IIS---LLNV F TPQK------ Site 973
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki IIT---LADI V KDP------- Site 973
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U CVQ---MLEW F DH-------- Site 973
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a IVK---VYEV L GPKG------ Site 973
Species Residue at Site 1777
in 'msaprobs'
muscle

The residue for every species at site 1777 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d IVT---LHDI I HT-------- Site 973
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. IIT---LADI V KDP------- Site 973
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ITK---LVET I LE-------- Site 973
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. VIG---LLDV F TSAT------ Site 973
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos IVH---LKRH F MF-------- Site 973
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE IIT---LLDV V KDP------- Site 973
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH IVA---LKHC F YSQG------ Site 973
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD IVS---LKNS F YTSD------ Site 973
Candida.orthopsilosis.IME2 LVQ---IFEI F IDD------- Site 973
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -------LDA F GH-------- Site 973
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str IIG---LLNA F SPQR------ Site 973
Debaryomyces.hansenii.IME2 LVQ---IYDM F IDN------- Site 973
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati IVK---LKHC F YSHT------ Site 973
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin LTK---LVEI F LE-------- Site 973
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE IVT---LFDI I YA-------- Site 973
Caenorhabditis.briggsae.CDK1 VVG---LEAV I MQ-------- Site 973
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO IIT---LLAV V KDP------- Site 973
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de VVQ---LKAV F PH-------- Site 973
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos VIH---MLES F TF-------- Site 973
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. VVR---LFDV C TVSR------ Site 973
Monosiga.brevicollis.CDK1 IVS---LQDV V LQ-------- Site 973
Saccharomyces.cerevisiae.SKY1 ILK---LLDH F NHKG------ Site 973
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP IIS---ILDI Q VPYD------ Site 973
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U LVN---LLEV F RR-------- Site 973
Drosophila.melanogaster.GSK3..Protein.kinase.shagg IVK---LLYF F YSSG------ Site 973
Species Residue at Site 1777
in 'msaprobs'
muscle

The residue for every species at site 1777 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas VPK---VYWY G IE-------- Site 989
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. IIS---LLDV I RAE------- Site 973
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d LVN---LLEV C KK-------- Site 973
Dictyostelium.discoideum.CDK10..Probable.cyclin.de IVS---LLEV V IGS------- Site 973
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d IVE---LKEA F RR-------- Site 973
Ajellomyces.capsulatus.CDK1 IVR---LLNI V HA-------- Site 973
Dictystelium.discoideum.MAPK3..Extracellular.signa LIS---IKDI L KPNS------ Site 973
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep VVR---LFDV C TVSR------ Site 973
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep IVE---LKEV V VGN------- Site 973
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac IIG---LLNV F TPQK------ Site 973
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. VIG---LLDV F TPAS------ Site 973
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO IVK---LYEV C QFLE------ Site 973
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri VLS---ALDI L QPPQ------ Site 973
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha IIS---LLNV F TPQK------ Site 973
Saccharomyces.cerevisiae.CDK1 IVR---LYDI V HS-------- Site 973
Lodderomyces.elongisporus.IME2 LVQ---VFEV F IDD------- Site 973
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen VIG---LLDV F TPAT------ Site 973
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un CVQ---MYDW F DY-------- Site 973
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar IVE---LKEA F RR-------- Site 973
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. LID---LKYY F LEQS------ Site 973
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D IVR---LVDI F KAS------- Site 973
Homo.sapiens.CLK4..Dual.specificity.protein.kinase CVQ---MLEW F DH-------- Site 973
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U FVR---AYEC F QH-------- Site 973
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d LVN---LLEV F RR-------- Site 973
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen IVR---LRYF F YSSG------ Site 973
Species Residue at Site 1777
in 'msaprobs'
muscle

The residue for every species at site 1777 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 VVG---LEAV I MQ-------- Site 973
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep VVR---LMDV C ATSR------ Site 973
Cryptococcus.neoformans.SSN3..Serine.threonine.pro LVS---LREV I LE-------- Site 973
Salmo.salar.CDK1 IVE---LRDV I HT-------- Site 973
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d IIG---LLDA F GH-------- Site 973
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d VVQ---LKAV F PH-------- Site 973
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi IIR---LYDY E IT-------- Site 973
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen IVR---LRYF F YSSG------ Site 973
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ISV---YQEL F ITWN------ Site 973
Aspergillus.fumigatus.IME2 LVP---ALDI F LDP------- Site 973
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan VIS---LQKV F LSH------- Site 973
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha CVQ---MLEW F NY-------- Site 973
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha VIG---LLDV F TSAP------ Site 973
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S VLS---LLDI L QPANPSFFQE Site 962
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma FVR---AYEC F QH-------- Site 973
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina VIG---IRDI L RAST------ Site 973
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d IVT---LHDI V HT-------- Site 973
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. IVE---LKEV V VGN------- Site 973
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de LVN---LMEV F RR-------- Site 973
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S IIG---LLNA F TPQR------ Site 973
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. VIG---LVDV F TPND------ Site 973
Candida.glabrata.IME2 LIQ---VYEI F VDS------- Site 973
Homo.sapiens.MAK..Serine.threonine.protein.kinase. VIK---LKEV I RE-------- Site 973
Schizosaccharomyces.pombe.IME2 IVN---IFDL Y IDQ------- Site 973
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P IIS---ILAI Q RPVS------ Site 973
Species Residue at Site 1777
in 'msaprobs'
muscle

The residue for every species at site 1777 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl IVR---LYDV L HS-------- Site 973
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom VIR---FLEF F HD-------- Site 973
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. IPH---IRWY G QE-------- Site 988
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d IVT---LHDL I HT-------- Site 973
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d LVN---LIEV F RR-------- Site 973
Branchiostoma.floridae.CDK1 IVR---LLDV V HS-------- Site 973
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara CVR---MFDW F DY-------- Site 973
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH IVD---LIAY Y YTTG------ Site 973
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD LVN---MLEH A RR-------- Site 973
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR IVK---LKYF F YSSG------ Site 973
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. IVE---LKDV V VGN------- Site 973
Homo.sapiens.ICK..Serine.threonine.protein.kinase. VVK---LKEV I RE-------- Site 973
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci CVL---MSDW F NF-------- Site 973
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos IVH---LKRH F MF-------- Site 973
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep IVK---LLDV I HT-------- Site 973
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act IIA---IKDI L RPTV------ Site 973
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. VIG---LLDV F TPAR------ Site 973
Lachancea.thermotolerans.SKY1 ILS---LLDS F NHNG------ Site 973
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a IVK---VFEI L GPSG------ Site 973
Dictyostelium.discoideum.CDK1 VVS---LFDV L HC-------- Site 973
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. VIG---LLDV F TPDE------ Site 973
Xenopus.tropicalis.IME2 IVK---LLDV I HT-------- Site 973
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U FVR---SYEC F QH-------- Site 973
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. IIT---LADI V KDP------- Site 973
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d IVK---LLDV I HT-------- Site 973
Species Residue at Site 1777
in 'msaprobs'
muscle

The residue for every species at site 1777 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara IVR---LLDV V HS-------- Site 973
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. IVL---LHDI V HT-------- Site 973
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD IIK---LLNV I KAD------- Site 973
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos IVH---LKRH F MF-------- Site 973
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen IVR---LRYF F YSSG------ Site 973
Drosophila.melanogaster.GSK3H..Putative.glycogen.s IIT---LKWF F FSSG------ Site 973
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD IVK---LESV A VGQ------- Site 973
Encephalitozoon.cuniculi.CDK1 IVE---LSDV I YN-------- Site 973
Saccharomyces.kluyveri.IME2 LVQ---IYEL F IDN------- Site 973
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci CVQ---MLEW F DH-------- Site 973
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a IIG---INDI I RAPT------ Site 973
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. IVL---LHDI I HT-------- Site 973
Cryptococcus.neoformans.IME2 IIP---LYDA F ISP------- Site 973
Homo.sapiens.HIPK4..Homeodomain.interacting.protei VIR---FLEF F HD-------- Site 973
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote VVQ---LLDD F KISG------ Site 973
Candida.lusitaniae.IME2 LLQ---IYNL F IDE------- Site 973
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom FVR---SYEC F QH-------- Site 973
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A VIN---LIRV F LSH------- Site 973
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep VVK---LKDV F PH-------- Site 973
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. LVN---LLEV F RR-------- Site 973
Gallus.gallus.CDK2 IVK---LLDV I HT-------- Site 973
Emericella.nidulans.CDK1 IVR---LLNI V HA-------- Site 973
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ILM---LHEV V FDR------- Site 973
Homo.sapiens.CDK1 IVS---LQDV L MQ-------- Site 973
Candida.albicans.CDK1 IVR---LYDI I HS-------- Site 973
Species Residue at Site 1777
in 'msaprobs'
muscle

The residue for every species at site 1777 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca IIT---LLDI I KDP------- Site 973
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a IIA---IKDI L KPTV------ Site 973
Mus.musculus.ICK..Serine.threonine.protein.kinase. IVK---LKEV I RE-------- Site 973
Saccharomyces.castelli.IME2 LIQ---IFEI F ADT------- Site 973
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec CVR---MLDW F DH-------- Site 973
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep IIG---LLDA F GH-------- Site 973
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. IVL---LHDI I HT-------- Site 973
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly IVR---LKHC F YSTN------ Site 973
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS VAP---LCDA K RV-------- Site 973
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli IIG---LLDA F GH-------- Site 973
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho VVN---LIEI C RTKA------ Site 973
Homo.sapiens.HIPK2..Homeodomain.interacting.protei FVR---AYEC F QH-------- Site 973
Acyrthosiphon.pisum.CDK1 VVK---LYDV I MS-------- Site 973
Candida.tropicalis.CDK1 LVQ---IFEM F IDD------- Site 973
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin VIT---LIRV F LSH------- Site 973
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G IVR---LQYF F YSSG------ Site 973
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR IIT---LQAV V KDP------- Site 973
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de IVT---LHDI I HT-------- Site 973
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 IVK---LLDV V RDQ------- Site 973
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d IVT---LHDI V HT-------- Site 973
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA VIG---LLDV F TSAP------ Site 973
Candida.albicans.SSN3..Serine.threonine.protein.ki ITK---LVDI I LE-------- Site 973
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF IIK---LLEV L YDQ------- Site 973
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA IVK---LKYF F YSSG------ Site 973
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara VIG---LLDV F TPAT------ Site 973
Species Residue at Site 1777
in 'msaprobs'
muscle

The residue for every species at site 1777 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de IIP---LSDM T VVRA------ Site 960
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei IIT---LADI V KDP------- Site 973
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U FVR---AYEC F QH-------- Site 973
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d IVT---VREI V VGS------- Site 973
Candida.dubliniensis.IME2 LVQ---IYEM F IDD------- Site 973
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a IIS---LLNV F TPQK------ Site 973
Aspergillus.niger.IME2 LVP---ALDI F LDP------- Site 973
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge VIG---LLDV F SPAK------ Site 973
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d LVN---LIEV F RQ-------- Site 973
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. IVL---LHDI I HT-------- Site 973
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein IIT---LADI V KDP------- Site 973
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty IVT---LKGH F VH-------- Site 973
Schizosaccharomyces.japonicus.IME2 VVK---VFEL I VDA------- Site 973
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. IIG---ILNC F TPQK------ Site 973
Gallus.gallus.CDK1 IVC---LQDV L MQ-------- Site 973
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep IVR---LHDV L HS-------- Site 973
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P IVQ---LKAF Y YSNG------ Site 973
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE VVS---LRTV L HTVD------ Site 973
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. IVK---LKYF F YSSG------ Site 973
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. VIG---LLDV F TPDE------ Site 973
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ VVG---LYDI V QDA------- Site 973
Kluyveromyces.waltii.IME2 LVQ---IWEL F IDD------- Site 973
Debaryomyces.hansenii.SKY1 AIQ---LLDT F THKG------ Site 973
Saccharomyces.cerevisiae.IME2 LIQ---IFEV F IDS------- Site 973
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1777
in 'msaprobs'
muscle

The residue for every species at site 1777 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un VVR---LFDV C TVSR------ Site 973
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein IIN---LIDT V KDP------- Site 973
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a IVK---VFEI L GPSG------ Site 973
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep VVR---LFDV C TVSR------ Site 973
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST TVG---LQYY F YEKD------ Site 973
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk VIG---LLDV F TPDT------ Site 973
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de LVN---LIEV F RQ-------- Site 973
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act IIG---LLNV F TPQK------ Site 973
Candida.albicans.IME2 LVQ---IYEM F IDD------- Site 973
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d IVK---LMDV C ASAR------ Site 973
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k IVQ---IKEI V LGK------- Site 973
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. VIG---LLDV F TPAR------ Site 973
Kluyveromyces.lactis.IME2 LVT---IYEM F IDD------- Site 973
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina IIA---IKDI L RPTV------ Site 973
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. IIS---LLNV F TPQK------ Site 973
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. VIG---LLDV F TPAT------ Site 973
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 FPR---IRHH G KE-------- Site 973
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. VIG---LLDV F TPAT------ Site 973
Amphimedon.queenslandica.CDK1 IVS---LLDV L YC-------- Site 973
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d LVN---LIEV F RR-------- Site 973
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U IVR---LLDV I HS-------- Site 973
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME IVT---VREI V VGS------- Site 973
Neurospora.crassa.IME2 LVP---ALDI F LDP------- Site 973
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME IVR---LIDV L HS-------- Site 973
Dictyostelium.discoideum.DYRK2..Probable.serine.th IVH---LNNY F YF-------- Site 973
Species Residue at Site 1777
in 'msaprobs'
muscle

The residue for every species at site 1777 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep VVR---LMDV C ATSR------ Site 973
Hydra.magnipapillata.CDK1 IVQ---LLDV I QS-------- Site 973
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar IVE---LKEV V VGN------- Site 973
Ashbya.gossypii.IME2 LVQ---IYEL F IDD------- Site 973
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi IIR---LYDY E IT-------- Site 973
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos VIH---MLES F TF-------- Site 973
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p IID---LKYF F YERD------ Site 973
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace IIK---LLNV I RAQ------- Site 973
Schizosaccharomyces.pombe.b.IME2 LID---LLET F MDP------- Site 973
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a IIG---INDI I RAPT------ Site 973
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom FVR---AYEC F QH-------- Site 973
Schizosaccharomyces.pombe.CDK1 CVR---LLDI L HA-------- Site 973
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch CVQ---MYDW F DY-------- Site 973
Saccoglossus.kowalevskii.CDK1 IVR---LLDV V HS-------- Site 973
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas IPT---IRWC G AE-------- Site 973
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac IIG---LLNV F TPQK------ Site 973
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep IIK---LLDV V HR-------- Site 973
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable LSL---YHEM F IMWN------ Site 973
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep IVR---LLDV V HN-------- Site 973
Yarrowia.lipolytica.IME2 LVN---VHDM F VDS------- Site 973
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil LTT---LVEI F LE-------- Site 973
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli IVK---LHDV I HT-------- Site 973
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K VAP---LCDA I RY-------- Site 973
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly IVQ---LKAF Y YSNG------ Site 973
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk IVD---LIAY Y YTTG------ Site 973
Species Residue at Site 1777
in 'msaprobs'
muscle

The residue for every species at site 1777 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro IVT---LKGH F VH-------- Site 973
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo VLS---ALDI L QPPH------ Site 973
Scheffersomyces.stipitis.SKY1 VIQ---LLDT F THKG------ Site 973
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep IVR---LHDV L HS-------- Site 973

Generated by PhyloBot at 02:29, October 16th 2019
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