cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 1774 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1774 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1774 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1774 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1774
in 'msaprobs'
muscle

The residue for every species at site 1774 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 --NIVN---I F DLYIDQ---- Site 959
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD --CVAR---L L DHFTHRG--- Site 959
Danio.rerio.CDK1 --NIVK---L R DVIHT----- Site 959
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge --NVVA---I R DIVPPPQ--- Site 959
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d --NIVR---L H DVLHS----- Site 959
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK --NVVR---L L DVLHT----- Site 959
Candida.guilliermondii.IME2 --NLLH---I Y EVFIDT---- Site 959
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ --GIPH---L K WFGVE----- Site 960
Chlamydomonas.reinhardtii.LF4 --NIIK---L L EVLYDQ---- Site 959
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g --NIIK---L I AFFHTHN--- Site 959
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 --GFPR---I R HHGKE----- Site 987
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 --GIPQ---E Y YFGQE----- Site 959
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho --NVIS---L Q KVFLSH---- Site 959
Schizosaccharomyces.octosporus.b.IME2 --SLID---L L ETFMDP---- Site 959
Candida.albicans.MAPK3..Extracellular.signal.regul --NIIS---I L AIQRPIN--- Site 959
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. --NIVK---L L DVVRDQ---- Site 959
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 --PVVGFPTV K WYGQE----- Site 960
Suberites.domuncula.JNK..Stress.activated.protein. --NIIG---L K NLFTPAK--- Site 959
Homo.sapiens.CLK3..Dual.specificity.protein.kinase --LCVL---M S DWFNF----- Site 959
Aedes.aegypti.CDK1 --NIVS---L E DVLME----- Site 959
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci --RCVQ---M L EWFEH----- Site 959
Homo.sapiens.CLK2..Dual.specificity.protein.kinase --LCVQ---M F DWFDY----- Site 959
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos --NVVH---M K DFFYF----- Site 959
Homo.sapiens.HIPK1..Homeodomain.interacting.protei --NFVR---S Y ECFQH----- Site 959
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar --NLVN---L L EVFRR----- Site 959
Species Residue at Site 1774
in 'msaprobs'
muscle

The residue for every species at site 1774 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 --TIVS---L D DVIYN----- Site 959
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. --NIIK---L I DTVKDP---- Site 959
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM --NIID---I R DILRVDS--- Site 959
Strongylocentrotus.purpuratus.CDK1 --NIVK---L H DVVHS----- Site 959
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca --GIAN---I K WCGID----- Site 959
Drosophila.melanogaster.CDK1 --NIVC---L E DVLME----- Site 959
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 --GLPK---L Y YYSQE----- Site 959
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. --GIPA---V K WFGFD----- Site 960
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH --CVVR---L I DHFKHSG--- Site 959
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d --NIVT---L H DLIHT----- Site 959
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. --NIVT---L H DIIHT----- Site 959
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET --NIIS---L L NVFTPQK--- Site 959
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 --NLVN---L L EVCKK----- Site 959
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U --NIIS---L L NVFTPQK--- Site 959
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. --NVIG---L L DVFTPAS--- Site 959
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo --NVLS---A L DILQPPH--- Site 959
Bombus.terrestris.CDK1 --NIVQ---L F DVVDG----- Site 959
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 --MVVQ---L L DDFKISG--- Site 959
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar --NLVS---L L EVYKK----- Site 959
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. --NIIG---L L NVFTPQK--- Site 959
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d --SVVN---M K EIVTDKQ--- Site 959
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. --NILA---L H EVVFDR---- Site 959
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. --NIVM---L K NYFYTVG--- Site 959
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G --NIVQ---L Q SYFYTLG--- Site 959
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 --GFPR---I R HHGKE----- Site 959
Species Residue at Site 1774
in 'msaprobs'
muscle

The residue for every species at site 1774 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 --GVPN---V K WFGVE----- Site 960
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO EFNFVR---A F ECFQH----- Site 959
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C --NIVK---L L DVVRDQ---- Site 959
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl --NVLS---A L DILQPPH--- Site 959
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 --NLVN---L L EVFRR----- Site 959
Homo.sapiens.HIPK3..Homeodomain.interacting.protei --NFVR---A Y ECFQH----- Site 959
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O --NIVT---V R EIVVGS---- Site 959
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d --NIVE---L K EAFRR----- Site 959
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci --LCVQ---M F DWFDY----- Site 959
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O --NIVT---V R EIVVGS---- Site 959
Naegleria.gruberi.LF4 --NVIS---L L EVVYDP---- Site 959
Saccharomyces.bayanus.IME2 --HLIQ---I F EVFIDS---- Site 959
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. --NIIK---L I DTVKDP---- Site 959
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a --NVIG---L V DVFTADL--- Site 959
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki --NVVN---L L DIFAH----- Site 959
Dictyostelium.discoideum.DYRK1..Probable.serine.th --KIIK---L K HHFKF----- Site 959
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos --YIVH---L K RHFMF----- Site 959
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos --NVIH---M L ENFTF----- Site 959
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d --NIVE---L K EAFRR----- Site 959
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a --NIIR---L L DVIPAK---- Site 959
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific --QIIK---L Y DYEIT----- Site 959
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos --NVVH---M K DFFYF----- Site 959
Aspergillus.nidulans.IME2 --HLVP---A L DIFLDP---- Site 959
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi --NVMG---L K YCFRK----- Site 959
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se --NVLS---L L DILQPAN--- Site 959
Species Residue at Site 1774
in 'msaprobs'
muscle

The residue for every species at site 1774 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. --NVIK---L K EVIRE----- Site 959
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep --NIVK---L L DVIHT----- Site 959
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. --NIIS---L L NVFTPQK--- Site 959
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. --NVVC---L K HCFFSTT--- Site 959
Penicillium.marneffei.IME2 --HIVP---A L DIFLDP---- Site 959
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen --NVIG---L L DVFSPAT--- Site 959
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a --NIVK---V Y EVLGPKG--- Site 959
Drosophila.melanogaster.MAK --NIVK---L K EVIRE----- Site 959
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH --HIIH---Y E RHFMH----- Site 959
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr --HCLR---L F RHFYH----- Site 959
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de --SVVN---M K EIVTDKQ--- Site 959
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep --NIVK---L L DVCLNP---- Site 959
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d --NIVE---L K EVVVGN---- Site 959
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin --NIIS---L L NVFTPQK--- Site 959
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a --NIIS---L L NVFTPQK--- Site 959
Homo.sapiens.CLK1..Dual.specificity.protein.kinase --RCVQ---M L EWFEH----- Site 959
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis --NVMG---V K YCFRK----- Site 959
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 --GFPR---I R HHGKE----- Site 959
Candida.parapsilosis.IME2 --NLVQ---I F EIFIDD---- Site 959
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p --NIVS---L V QVLLK----- Site 959
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen --NIVR---L R YFFYSSG--- Site 959
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. --NIIS---L L NVFTPQK--- Site 959
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki --NIIT---L A DIVKDP---- Site 959
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U --RCVQ---M L EWFDH----- Site 959
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a --NIVK---V Y EVLGPKG--- Site 959
Species Residue at Site 1774
in 'msaprobs'
muscle

The residue for every species at site 1774 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d --NIVT---L H DIIHT----- Site 959
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. --NIIT---L A DIVKDP---- Site 959
Yarrowia.lipolytica.SSN3..Serine.threonine.protein --NITK---L V ETILE----- Site 959
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. --NVIG---L L DVFTSAT--- Site 959
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos --YIVH---L K RHFMF----- Site 959
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE --NIIT---L L DVVKDP---- Site 959
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH --NIVA---L K HCFYSQG--- Site 959
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD --NIVS---L K NSFYTSD--- Site 959
Candida.orthopsilosis.IME2 --NLVQ---I F EIFIDD---- Site 959
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- L DAFGH----- Site 959
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str --NIIG---L L NAFSPQR--- Site 959
Debaryomyces.hansenii.IME2 --SLVQ---I Y DMFIDN---- Site 959
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati --NIVK---L K HCFYSHT--- Site 959
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin --HLTK---L V EIFLE----- Site 959
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE --NIVT---L F DIIYA----- Site 959
Caenorhabditis.briggsae.CDK1 --NVVG---L E AVIMQ----- Site 959
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO --NIIT---L L AVVKDP---- Site 959
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de --YVVQ---L K AVFPH----- Site 959
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos --NVIH---M L ESFTF----- Site 959
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. --NVVR---L F DVCTVSR--- Site 959
Monosiga.brevicollis.CDK1 --NIVS---L Q DVVLQ----- Site 959
Saccharomyces.cerevisiae.SKY1 --HILK---L L DHFNHKG--- Site 959
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP --NIIS---I L DIQVPYD--- Site 959
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U --NLVN---L L EVFRR----- Site 959
Drosophila.melanogaster.GSK3..Protein.kinase.shagg --NIVK---L L YFFYSSG--- Site 959
Species Residue at Site 1774
in 'msaprobs'
muscle

The residue for every species at site 1774 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas --GVPK---V Y WYGIE----- Site 960
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. --NIIS---L L DVIRAE---- Site 959
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d --NLVN---L L EVCKK----- Site 959
Dictyostelium.discoideum.CDK10..Probable.cyclin.de --NIVS---L L EVVIGS---- Site 959
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d --NIVE---L K EAFRR----- Site 959
Ajellomyces.capsulatus.CDK1 --NIVR---L L NIVHA----- Site 959
Dictystelium.discoideum.MAPK3..Extracellular.signa --NLIS---I K DILKPNS--- Site 959
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep --NVVR---L F DVCTVSR--- Site 959
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep --NIVE---L K EVVVGN---- Site 959
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac --NIIG---L L NVFTPQK--- Site 959
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. --NVIG---L L DVFTPAS--- Site 959
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO --NIVK---L Y EVCQFLE--- Site 959
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri --NVLS---A L DILQPPQ--- Site 959
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha --NIIS---L L NVFTPQK--- Site 959
Saccharomyces.cerevisiae.CDK1 --NIVR---L Y DIVHS----- Site 959
Lodderomyces.elongisporus.IME2 --CLVQ---V F EVFIDD---- Site 959
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen --NVIG---L L DVFTPAT--- Site 959
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un --LCVQ---M Y DWFDY----- Site 959
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar --NIVE---L K EAFRR----- Site 959
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. --NLID---L K YYFLEQS--- Site 959
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D --NIVR---L V DIFKAS---- Site 959
Homo.sapiens.CLK4..Dual.specificity.protein.kinase --RCVQ---M L EWFDH----- Site 959
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U --NFVR---A Y ECFQH----- Site 959
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d --NLVN---L L EVFRR----- Site 959
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen --NIVR---L R YFFYSSG--- Site 959
Species Residue at Site 1774
in 'msaprobs'
muscle

The residue for every species at site 1774 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 --NVVG---L E AVIMQ----- Site 959
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep --NVVR---L M DVCATSR--- Site 959
Cryptococcus.neoformans.SSN3..Serine.threonine.pro --NLVS---L R EVILE----- Site 959
Salmo.salar.CDK1 --NIVE---L R DVIHT----- Site 959
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d --NIIG---L L DAFGH----- Site 959
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d --YVVQ---L K AVFPH----- Site 959
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi --KIIR---L Y DYEIT----- Site 959
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen --NIVR---L R YFFYSSG--- Site 959
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable --HISV---Y Q ELFITWN--- Site 959
Aspergillus.fumigatus.IME2 --HLVP---A L DIFLDP---- Site 959
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan --NVIS---L Q KVFLSH---- Site 959
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha --HCVQ---M L EWFNY----- Site 959
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha --NVIG---L L DVFTSAP--- Site 959
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S --NVLS---L L DILQPANPSF Site 959
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma --NFVR---A Y ECFQH----- Site 959
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina --NVIG---I R DILRAST--- Site 959
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d --NIVT---L H DIVHT----- Site 959
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. --NIVE---L K EVVVGN---- Site 959
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de --NLVN---L M EVFRR----- Site 959
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S --NIIG---L L NAFTPQR--- Site 959
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. --NVIG---L V DVFTPND--- Site 959
Candida.glabrata.IME2 --HLIQ---V Y EIFVDS---- Site 959
Homo.sapiens.MAK..Serine.threonine.protein.kinase. --NVIK---L K EVIRE----- Site 959
Schizosaccharomyces.pombe.IME2 --NIVN---I F DLYIDQ---- Site 959
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P --NIIS---I L AIQRPVS--- Site 959
Species Residue at Site 1774
in 'msaprobs'
muscle

The residue for every species at site 1774 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl --NIVR---L Y DVLHS----- Site 959
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom --HVIR---F L EFFHD----- Site 959
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. --GIPH---I R WYGQE----- Site 960
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d --NIVT---L H DLIHT----- Site 959
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d --NLVN---L I EVFRR----- Site 959
Branchiostoma.floridae.CDK1 --NIVR---L L DVVHS----- Site 959
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara --LCVR---M F DWFDY----- Site 959
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH --NIVD---L I AYYYTTG--- Site 959
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD --NLVN---M L EHARR----- Site 959
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR --NIVK---L K YFFYSSG--- Site 959
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. --NIVE---L K DVVVGN---- Site 959
Homo.sapiens.ICK..Serine.threonine.protein.kinase. --NVVK---L K EVIRE----- Site 959
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci --LCVL---M S DWFNF----- Site 959
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos --YIVH---L K RHFMF----- Site 959
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep --NIVK---L L DVIHT----- Site 959
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act --NIIA---I K DILRPTV--- Site 959
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. --NVIG---L L DVFTPAR--- Site 959
Lachancea.thermotolerans.SKY1 --HILS---L L DSFNHNG--- Site 959
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a --NIVK---V F EILGPSG--- Site 959
Dictyostelium.discoideum.CDK1 --NVVS---L F DVLHC----- Site 959
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. --NVIG---L L DVFTPDE--- Site 959
Xenopus.tropicalis.IME2 --NIVK---L L DVIHT----- Site 959
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U --NFVR---S Y ECFQH----- Site 959
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. --NIIT---L A DIVKDP---- Site 959
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d --NIVK---L L DVIHT----- Site 959
Species Residue at Site 1774
in 'msaprobs'
muscle

The residue for every species at site 1774 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara --NIVR---L L DVVHS----- Site 959
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. --NIVL---L H DIVHT----- Site 959
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD --NIIK---L L NVIKAD---- Site 959
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos --YIVH---L K RHFMF----- Site 959
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen --NIVR---L R YFFYSSG--- Site 959
Drosophila.melanogaster.GSK3H..Putative.glycogen.s --NIIT---L K WFFFSSG--- Site 959
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD --NIVK---L E SVAVGQ---- Site 959
Encephalitozoon.cuniculi.CDK1 --TIVE---L S DVIYN----- Site 959
Saccharomyces.kluyveri.IME2 --HLVQ---I Y ELFIDN---- Site 959
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci --RCVQ---M L EWFDH----- Site 959
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a --NIIG---I N DIIRAPT--- Site 959
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. --NIVL---L H DIIHT----- Site 959
Cryptococcus.neoformans.IME2 --AIIP---L Y DAFISP---- Site 959
Homo.sapiens.HIPK4..Homeodomain.interacting.protei --HVIR---F L EFFHD----- Site 959
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote --MVVQ---L L DDFKISG--- Site 959
Candida.lusitaniae.IME2 --NLLQ---I Y NLFIDE---- Site 959
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom --NFVR---S Y ECFQH----- Site 959
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A --NVIN---L I RVFLSH---- Site 959
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep --YVVK---L K DVFPH----- Site 959
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. --NLVN---L L EVFRR----- Site 959
Gallus.gallus.CDK2 --NIVK---L L DVIHT----- Site 959
Emericella.nidulans.CDK1 --NIVR---L L NIVHA----- Site 959
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. --NILM---L H EVVFDR---- Site 959
Homo.sapiens.CDK1 --NIVS---L Q DVLMQ----- Site 959
Candida.albicans.CDK1 --NIVR---L Y DIIHS----- Site 959
Species Residue at Site 1774
in 'msaprobs'
muscle

The residue for every species at site 1774 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca --NIIT---L L DIIKDP---- Site 959
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a --NIIA---I K DILKPTV--- Site 959
Mus.musculus.ICK..Serine.threonine.protein.kinase. --NIVK---L K EVIRE----- Site 959
Saccharomyces.castelli.IME2 --HLIQ---I F EIFADT---- Site 959
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec --GCVR---M L DWFDH----- Site 959
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep --NIIG---L L DAFGH----- Site 959
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. --NIVL---L H DIIHT----- Site 959
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly --NIVR---L K HCFYSTN--- Site 959
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS --RVAP---L C DAKRV----- Site 959
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli --NIIG---L L DAFGH----- Site 959
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho --NVVN---L I EICRTKA--- Site 959
Homo.sapiens.HIPK2..Homeodomain.interacting.protei --NFVR---A Y ECFQH----- Site 959
Acyrthosiphon.pisum.CDK1 --NVVK---L Y DVIMS----- Site 959
Candida.tropicalis.CDK1 --CLVQ---I F EMFIDD---- Site 959
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin --NVIT---L I RVFLSH---- Site 959
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G --NIVR---L Q YFFYSSG--- Site 959
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR --NIIT---L Q AVVKDP---- Site 959
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de --NIVT---L H DIIHT----- Site 959
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 --NIVK---L L DVVRDQ---- Site 959
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d --NIVT---L H DIVHT----- Site 959
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA --NVIG---L L DVFTSAP--- Site 959
Candida.albicans.SSN3..Serine.threonine.protein.ki --NITK---L V DIILE----- Site 959
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF --NIIK---L L EVLYDQ---- Site 959
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA --NIVK---L K YFFYSSG--- Site 959
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara --NVIG---L L DVFTPAT--- Site 959
Species Residue at Site 1774
in 'msaprobs'
muscle

The residue for every species at site 1774 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de --NIIP---L S DMTVVRA--- Site 957
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei --NIIT---L A DIVKDP---- Site 959
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U --NFVR---A Y ECFQH----- Site 959
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d --NIVT---V R EIVVGS---- Site 959
Candida.dubliniensis.IME2 --CLVQ---I Y EMFIDD---- Site 959
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a --NIIS---L L NVFTPQK--- Site 959
Aspergillus.niger.IME2 --HLVP---A L DIFLDP---- Site 959
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge --NVIG---L L DVFSPAK--- Site 959
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d --NLVN---L I EVFRQ----- Site 959
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. --NIVL---L H DIIHT----- Site 959
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein --NIIT---L A DIVKDP---- Site 959
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty --NIVT---L K GHFVH----- Site 959
Schizosaccharomyces.japonicus.IME2 --NVVK---V F ELIVDA---- Site 959
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. --NIIG---I L NCFTPQK--- Site 959
Gallus.gallus.CDK1 --NIVC---L Q DVLMQ----- Site 959
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep --NIVR---L H DVLHS----- Site 959
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P --NIVQ---L K AFYYSNG--- Site 959
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE --NVVS---L R TVLHTVD--- Site 959
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. --NIVK---L K YFFYSSG--- Site 959
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. --NVIG---L L DVFTPDE--- Site 959
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ --NVVG---L Y DIVQDA---- Site 959
Kluyveromyces.waltii.IME2 --NLVQ---I W ELFIDD---- Site 959
Debaryomyces.hansenii.SKY1 --HAIQ---L L DTFTHKG--- Site 959
Saccharomyces.cerevisiae.IME2 --HLIQ---I F EVFIDS---- Site 959
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1774
in 'msaprobs'
muscle

The residue for every species at site 1774 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un --NVVR---L F DVCTVSR--- Site 959
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein --NIIN---L I DTVKDP---- Site 959
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a --NIVK---V F EILGPSG--- Site 959
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep --NVVR---L F DVCTVSR--- Site 959
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST --NTVG---L Q YYFYEKD--- Site 959
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk --NVIG---L L DVFTPDT--- Site 959
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de --NLVN---L I EVFRQ----- Site 959
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act --NIIG---L L NVFTPQK--- Site 959
Candida.albicans.IME2 --CLVQ---I Y EMFIDD---- Site 959
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d --NIVK---L M DVCASAR--- Site 959
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k --NIVQ---I K EIVLGK---- Site 959
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. --NVIG---L L DVFTPAR--- Site 959
Kluyveromyces.lactis.IME2 --NLVT---I Y EMFIDD---- Site 959
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina --NIIA---I K DILRPTV--- Site 959
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. --NIIS---L L NVFTPQK--- Site 959
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. --NVIG---L L DVFTPAT--- Site 959
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 --GFPR---I R HHGKE----- Site 959
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. --NVIG---L L DVFTPAT--- Site 959
Amphimedon.queenslandica.CDK1 --NIVS---L L DVLYC----- Site 959
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d --NLVN---L I EVFRR----- Site 959
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U --NIVR---L L DVIHS----- Site 959
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME --NIVT---V R EIVVGS---- Site 959
Neurospora.crassa.IME2 --HLVP---A L DIFLDP---- Site 959
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME --NIVR---L I DVLHS----- Site 959
Dictyostelium.discoideum.DYRK2..Probable.serine.th --SIVH---L N NYFYF----- Site 959
Species Residue at Site 1774
in 'msaprobs'
muscle

The residue for every species at site 1774 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep --NVVR---L M DVCATSR--- Site 959
Hydra.magnipapillata.CDK1 --NIVQ---L L DVIQS----- Site 959
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar --NIVE---L K EVVVGN---- Site 959
Ashbya.gossypii.IME2 --HLVQ---I Y ELFIDD---- Site 959
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi --KIIR---L Y DYEIT----- Site 959
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos --NVIH---M L ESFTF----- Site 959
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p --NIID---L K YFFYERD--- Site 959
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace --NIIK---L L NVIRAQ---- Site 959
Schizosaccharomyces.pombe.b.IME2 --CLID---L L ETFMDP---- Site 959
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a --NIIG---I N DIIRAPT--- Site 959
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom --NFVR---A Y ECFQH----- Site 959
Schizosaccharomyces.pombe.CDK1 --NCVR---L L DILHA----- Site 959
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch --LCVQ---M Y DWFDY----- Site 959
Saccoglossus.kowalevskii.CDK1 --NIVR---L L DVVHS----- Site 959
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas --GIPT---I R WCGAE----- Site 959
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac --NIIG---L L NVFTPQK--- Site 959
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep --NIIK---L L DVVHR----- Site 959
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable --NLSL---Y H EMFIMWN--- Site 959
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep --NIVR---L L DVVHN----- Site 959
Yarrowia.lipolytica.IME2 --FLVN---V H DMFVDS---- Site 959
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil --HLTT---L V EIFLE----- Site 959
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli --NIVK---L H DVIHT----- Site 959
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K --NVAP---L C DAIRY----- Site 959
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly --NIVQ---L K AFYYSNG--- Site 959
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk --NIVD---L I AYYYTTG--- Site 959
Species Residue at Site 1774
in 'msaprobs'
muscle

The residue for every species at site 1774 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro --NIVT---L K GHFVH----- Site 959
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo --NVLS---A L DILQPPH--- Site 959
Scheffersomyces.stipitis.SKY1 --HVIQ---L L DTFTHKG--- Site 959
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep --NIVR---L H DVLHS----- Site 959

Generated by PhyloBot at 16:14, October 23rd 2019
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