cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1769 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1769 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1769 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1769 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1769
in 'msaprobs'
muscle

The residue for every species at site 1769 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -D-----NIV N ---IFDLYID Site 955
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -K-----CVA R ---LLDHFTH Site 955
Danio.rerio.CDK1 -P-----NIV K ---LRDVIHT Site 955
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -E-----NVV A ---IRDIVPP Site 955
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -K-----NIV R ---LHDVLHS Site 955
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -K-----NVV R ---LLDVLHT Site 955
Candida.guilliermondii.IME2 -I-----NLL H ---IYEVFID Site 955
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -T-----GIP H ---LKWFGVE Site 956
Chlamydomonas.reinhardtii.LF4 -A-----NII K ---LLEVLYD Site 955
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -P-----NII K ---LIAFFHT Site 955
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -V-----GFP R ---IRHHGKE Site 960
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 -P-----GIP Q ---EYYFGQE Site 955
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -P-----NVI S ---LQKVFLS Site 955
Schizosaccharomyces.octosporus.b.IME2 -P-----SLI D ---LLETFMD Site 955
Candida.albicans.MAPK3..Extracellular.signal.regul -E-----NII S ---ILAIQRP Site 955
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -P-----NIV K ---LLDVVRD Site 955
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -Q-----PVV G FPTVKWYGQE Site 955
Suberites.domuncula.JNK..Stress.activated.protein. -K-----NII G ---LKNLFTP Site 955
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -F-----LCV L ---MSDWFNF Site 955
Aedes.aegypti.CDK1 -P-----NIV S ---LEDVLME Site 955
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -F-----RCV Q ---MLEWFEH Site 955
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -N-----LCV Q ---MFDWFDY Site 955
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -Y-----NVV H ---MKDFFYF Site 955
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -Y-----NFV R ---SYECFQH Site 955
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -P-----NLV N ---LLEVFRR Site 955
Species Residue at Site 1769
in 'msaprobs'
muscle

The residue for every species at site 1769 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -P-----TIV S ---LDDVIYN Site 955
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -T-----NII K ---LIDTVKD Site 955
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -E-----NII D ---IRDILRV Site 955
Strongylocentrotus.purpuratus.CDK1 -K-----NIV K ---LHDVVHS Site 955
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -T-----GIA N ---IKWCGID Site 955
Drosophila.melanogaster.CDK1 -E-----NIV C ---LEDVLME Site 955
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -V-----GLP K ---LYYYSQE Site 955
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -I-----GIP A ---VKWFGFD Site 956
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -K-----CVV R ---LIDHFKH Site 955
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -A-----NIV T ---LHDLIHT Site 955
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -A-----NIV T ---LHDIIHT Site 955
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -K-----NII S ---LLNVFTP Site 955
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -E-----NLV N ---LLEVCKK Site 955
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -K-----NII S ---LLNVFTP Site 955
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -E-----NVI G ---LLDVFTP Site 955
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -D-----NVL S ---ALDILQP Site 955
Bombus.terrestris.CDK1 -P-----NIV Q ---LFDVVDG Site 955
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -E-----MVV Q ---LLDDFKI Site 955
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -E-----NLV S ---LLEVYKK Site 955
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -K-----NII G ---LLNVFTP Site 955
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -R-----SVV N ---MKEIVTD Site 955
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -P-----NIL A ---LHEVVFD Site 955
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -P-----NIV M ---LKNYFYT Site 955
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -P-----NIV Q ---LQSYFYT Site 955
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -V-----GFP R ---IRHHGKE Site 955
Species Residue at Site 1769
in 'msaprobs'
muscle

The residue for every species at site 1769 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -T-----GVP N ---VKWFGVE Site 956
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -ENADEFNFV R ---AFECFQH Site 955
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -P-----NIV K ---LLDVVRD Site 955
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -D-----NVL S ---ALDILQP Site 955
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -P-----NLV N ---LLEVFRR Site 955
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -Y-----NFV R ---AYECFQH Site 955
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -P-----NIV T ---VREIVVG Site 955
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -D-----NIV E ---LKEAFRR Site 955
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -N-----LCV Q ---MFDWFDY Site 955
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -P-----NIV T ---VREIVVG Site 955
Naegleria.gruberi.LF4 -D-----NVI S ---LLEVVYD Site 955
Saccharomyces.bayanus.IME2 -D-----HLI Q ---IFEVFID Site 955
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -T-----NII K ---LIDTVKD Site 955
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -D-----NVI G ---LVDVFTA Site 955
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -D-----NVV N ---LLDIFAH Site 955
Dictyostelium.discoideum.DYRK1..Probable.serine.th -Y-----KII K ---LKHHFKF Site 955
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -Y-----YIV H ---LKRHFMF Site 955
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -M-----NVI H ---MLENFTF Site 955
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -E-----NIV E ---LKEAFRR Site 955
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -P-----NII R ---LLDVIPA Site 955
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific SD-----QII K ---LYDYEIT Site 955
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -H-----NVV H ---MKDFFYF Site 955
Aspergillus.nidulans.IME2 -P-----HLV P ---ALDIFLD Site 955
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -D-----NVM G ---LKYCFRK Site 955
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -D-----NVL S ---LLDILQP Site 955
Species Residue at Site 1769
in 'msaprobs'
muscle

The residue for every species at site 1769 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -A-----NVI K ---LKEVIRE Site 955
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -P-----NIV K ---LLDVIHT Site 955
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -K-----NII S ---LLNVFTP Site 955
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -P-----NVV C ---LKHCFFS Site 955
Penicillium.marneffei.IME2 -T-----HIV P ---ALDIFLD Site 955
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -E-----NVI G ---LLDVFSP Site 955
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -D-----NIV K ---VYEVLGP Site 955
Drosophila.melanogaster.MAK -P-----NIV K ---LKEVIRE Site 955
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -Q-----HII H ---YERHFMH Site 955
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -F-----HCL R ---LFRHFYH Site 955
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -Q-----SVV N ---MKEIVTD Site 955
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -E-----NIV K ---LLDVCLN Site 955
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -P-----NIV E ---LKEVVVG Site 955
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -K-----NII S ---LLNVFTP Site 955
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -K-----NII S ---LLNVFTP Site 955
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -F-----RCV Q ---MLEWFEH Site 955
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -D-----NVM G ---VKYCFRK Site 955
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -V-----GFP R ---IRHHGKE Site 955
Candida.parapsilosis.IME2 -P-----NLV Q ---IFEIFID Site 955
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -E-----NIV S ---LVQVLLK Site 955
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -C-----NIV R ---LRYFFYS Site 955
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -K-----NII S ---LLNVFTP Site 955
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -P-----NII T ---LADIVKD Site 955
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -F-----RCV Q ---MLEWFDH Site 955
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -D-----NIV K ---VYEVLGP Site 955
Species Residue at Site 1769
in 'msaprobs'
muscle

The residue for every species at site 1769 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -A-----NIV T ---LHDIIHT Site 955
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -P-----NII T ---LADIVKD Site 955
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -R-----NIT K ---LVETILE Site 955
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -E-----NVI G ---LLDVFTS Site 955
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -Y-----YIV H ---LKRHFMF Site 955
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -T-----NII T ---LLDVVKD Site 955
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -S-----NIV A ---LKHCFYS Site 955
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -I-----NIV S ---LKNSFYT Site 955
Candida.orthopsilosis.IME2 -P-----NLV Q ---IFEIFID Site 955
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----LDAFGH  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -K-----NII G ---LLNAFSP Site 955
Debaryomyces.hansenii.IME2 -P-----SLV Q ---IYDMFID Site 955
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -P-----NIV K ---LKHCFYS Site 955
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -K-----HLT K ---LVEIFLE Site 955
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -D-----NIV T ---LFDIIYA Site 955
Caenorhabditis.briggsae.CDK1 -P-----NVV G ---LEAVIMQ Site 955
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -T-----NII T ---LLAVVKD Site 955
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -Q-----YVV Q ---LKAVFPH Site 955
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -M-----NVI H ---MLESFTF Site 955
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -P-----NVV R ---LFDVCTV Site 955
Monosiga.brevicollis.CDK1 -P-----NIV S ---LQDVVLQ Site 955
Saccharomyces.cerevisiae.SKY1 -N-----HIL K ---LLDHFNH Site 955
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -E-----NII S ---ILDIQVP Site 955
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -E-----NLV N ---LLEVFRR Site 955
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -C-----NIV K ---LLYFFYS Site 955
Species Residue at Site 1769
in 'msaprobs'
muscle

The residue for every species at site 1769 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -I-----GVP K ---VYWYGIE Site 958
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -P-----NII S ---LLDVIRA Site 955
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -E-----NLV N ---LLEVCKK Site 955
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -P-----NIV S ---LLEVVIG Site 955
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -E-----NIV E ---LKEAFRR Site 955
Ajellomyces.capsulatus.CDK1 -P-----NIV R ---LLNIVHA Site 955
Dictystelium.discoideum.MAPK3..Extracellular.signa -E-----NLI S ---IKDILKP Site 955
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -P-----NVV R ---LFDVCTV Site 955
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -P-----NIV E ---LKEVVVG Site 955
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -K-----NII G ---LLNVFTP Site 955
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -E-----NVI G ---LLDVFTP Site 955
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -A-----NIV K ---LYEVCQF Site 955
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -D-----NVL S ---ALDILQP Site 955
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -K-----NII S ---LLNVFTP Site 955
Saccharomyces.cerevisiae.CDK1 -D-----NIV R ---LYDIVHS Site 955
Lodderomyces.elongisporus.IME2 -P-----CLV Q ---VFEVFID Site 955
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -E-----NVI G ---LLDVFTP Site 955
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -H-----LCV Q ---MYDWFDY Site 955
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -E-----NIV E ---LKEAFRR Site 955
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -P-----NLI D ---LKYYFLE Site 955
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -P-----NIV R ---LVDIFKA Site 955
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -F-----RCV Q ---MLEWFDH Site 955
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -Y-----NFV R ---AYECFQH Site 955
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -P-----NLV N ---LLEVFRR Site 955
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -C-----NIV R ---LRYFFYS Site 955
Species Residue at Site 1769
in 'msaprobs'
muscle

The residue for every species at site 1769 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -P-----NVV G ---LEAVIMQ Site 955
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -P-----NVV R ---LMDVCAT Site 955
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -R-----NLV S ---LREVILE Site 955
Salmo.salar.CDK1 -P-----NIV E ---LRDVIHT Site 955
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -P-----NII G ---LLDAFGH Site 955
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -Q-----YVV Q ---LKAVFPH Site 955
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi SD-----KII R ---LYDYEIT Site 955
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -C-----NIV R ---LRYFFYS Site 955
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -A-----HIS V ---YQELFIT Site 955
Aspergillus.fumigatus.IME2 -P-----HLV P ---ALDIFLD Site 955
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -P-----NVI S ---LQKVFLS Site 955
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -Y-----HCV Q ---MLEWFNY Site 955
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -E-----NVI G ---LLDVFTS Site 955
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -D-----NVL S ---LLDILQP Site 955
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -Y-----NFV R ---AYECFQH Site 955
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -E-----NVI G ---IRDILRA Site 955
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -A-----NIV T ---LHDIVHT Site 955
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -P-----NIV E ---LKEVVVG Site 955
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -P-----NLV N ---LMEVFRR Site 955
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -K-----NII G ---LLNAFTP Site 955
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -E-----NVI G ---LVDVFTP Site 955
Candida.glabrata.IME2 -K-----HLI Q ---VYEIFVD Site 955
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -A-----NVI K ---LKEVIRE Site 955
Schizosaccharomyces.pombe.IME2 -E-----NIV N ---IFDLYID Site 955
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -E-----NII S ---ILAIQRP Site 955
Species Residue at Site 1769
in 'msaprobs'
muscle

The residue for every species at site 1769 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -K-----NIV R ---LYDVLHS Site 955
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -A-----HVI R ---FLEFFHD Site 955
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -V-----GIP H ---IRWYGQE Site 958
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -A-----NIV T ---LHDLIHT Site 955
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -P-----NLV N ---LIEVFRR Site 955
Branchiostoma.floridae.CDK1 -P-----NIV R ---LLDVVHS Site 955
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -N-----LCV R ---MFDWFDY Site 955
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -P-----NIV D ---LIAYYYT Site 955
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -E-----NLV N ---MLEHARR Site 955
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -P-----NIV K ---LKYFFYS Site 955
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. -P-----NIV E ---LKDVVVG Site 955
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -A-----NVV K ---LKEVIRE Site 955
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -F-----LCV L ---MSDWFNF Site 955
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -Y-----YIV H ---LKRHFMF Site 955
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -P-----NIV K ---LLDVIHT Site 955
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -D-----NII A ---IKDILRP Site 955
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -E-----NVI G ---LLDVFTP Site 955
Lachancea.thermotolerans.SKY1 -K-----HIL S ---LLDSFNH Site 955
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -D-----NIV K ---VFEILGP Site 955
Dictyostelium.discoideum.CDK1 -P-----NVV S ---LFDVLHC Site 955
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -E-----NVI G ---LLDVFTP Site 955
Xenopus.tropicalis.IME2 -P-----NIV K ---LLDVIHT Site 955
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -Y-----NFV R ---SYECFQH Site 955
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -P-----NII T ---LADIVKD Site 955
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -P-----NIV K ---LLDVIHT Site 955
Species Residue at Site 1769
in 'msaprobs'
muscle

The residue for every species at site 1769 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -P-----NIV R ---LLDVVHS Site 955
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -A-----NIV L ---LHDIVHT Site 955
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -E-----NII K ---LLNVIKA Site 955
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -Y-----YIV H ---LKRHFMF Site 955
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -C-----NIV R ---LRYFFYS Site 955
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -D-----NII T ---LKWFFFS Site 955
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -E-----NIV K ---LESVAVG Site 955
Encephalitozoon.cuniculi.CDK1 -S-----TIV E ---LSDVIYN Site 955
Saccharomyces.kluyveri.IME2 -K-----HLV Q ---IYELFID Site 955
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -F-----RCV Q ---MLEWFDH Site 955
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -E-----NII G ---INDIIRA Site 955
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -A-----NIV L ---LHDIIHT Site 955
Cryptococcus.neoformans.IME2 -P-----AII P ---LYDAFIS Site 955
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -A-----HVI R ---FLEFFHD Site 955
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -E-----MVV Q ---LLDDFKI Site 955
Candida.lusitaniae.IME2 -P-----NLL Q ---IYNLFID Site 955
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -Y-----NFV R ---SYECFQH Site 955
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -P-----NVI N ---LIRVFLS Site 955
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -Q-----YVV K ---LKDVFPH Site 955
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -M-----NLV N ---LLEVFRR Site 955
Gallus.gallus.CDK2 -P-----NIV K ---LLDVIHT Site 955
Emericella.nidulans.CDK1 -P-----NIV R ---LLNIVHA Site 955
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -P-----NIL M ---LHEVVFD Site 955
Homo.sapiens.CDK1 -P-----NIV S ---LQDVLMQ Site 955
Candida.albicans.CDK1 -D-----NIV R ---LYDIIHS Site 955
Species Residue at Site 1769
in 'msaprobs'
muscle

The residue for every species at site 1769 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -P-----NII T ---LLDIIKD Site 955
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -D-----NII A ---IKDILKP Site 955
Mus.musculus.ICK..Serine.threonine.protein.kinase. -A-----NIV K ---LKEVIRE Site 955
Saccharomyces.castelli.IME2 -K-----HLI Q ---IFEIFAD Site 955
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -Y-----GCV R ---MLDWFDH Site 955
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -P-----NII G ---LLDAFGH Site 955
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -A-----NIV L ---LHDIIHT Site 955
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -P-----NIV R ---LKHCFYS Site 955
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -S-----RVA P ---LCDAKRV Site 955
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -P-----NII G ---LLDAFGH Site 955
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -E-----NVV N ---LIEICRT Site 955
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -Y-----NFV R ---AYECFQH Site 955
Acyrthosiphon.pisum.CDK1 -E-----NVV K ---LYDVIMS Site 955
Candida.tropicalis.CDK1 -P-----CLV Q ---IFEMFID Site 955
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -Q-----NVI T ---LIRVFLS Site 955
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -C-----NIV R ---LQYFFYS Site 955
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -T-----NII T ---LQAVVKD Site 955
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -A-----NIV T ---LHDIIHT Site 955
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -P-----NIV K ---LLDVVRD Site 955
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -A-----NIV T ---LHDIVHT Site 955
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -E-----NVI G ---LLDVFTS Site 955
Candida.albicans.SSN3..Serine.threonine.protein.ki -K-----NIT K ---LVDIILE Site 955
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -G-----NII K ---LLEVLYD Site 955
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -H-----NIV K ---LKYFFYS Site 955
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -E-----NVI G ---LLDVFTP Site 955
Species Residue at Site 1769
in 'msaprobs'
muscle

The residue for every species at site 1769 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -E-----NII P ---LSDMTVV Site 955
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -P-----NII T ---LADIVKD Site 955
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -F-----NFV R ---AYECFQH Site 955
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -P-----NIV T ---VREIVVG Site 955
Candida.dubliniensis.IME2 -P-----CLV Q ---IYEMFID Site 955
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -K-----NII S ---LLNVFTP Site 955
Aspergillus.niger.IME2 -P-----HLV P ---ALDIFLD Site 955
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -E-----NVI G ---LLDVFSP Site 955
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -E-----NLV N ---LIEVFRQ Site 955
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -A-----NIV L ---LHDIIHT Site 955
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -P-----NII T ---LADIVKD Site 955
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -Y-----NIV T ---LKGHFVH Site 955
Schizosaccharomyces.japonicus.IME2 -D-----NVV K ---VFELIVD Site 955
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -K-----NII G ---ILNCFTP Site 955
Gallus.gallus.CDK1 -P-----NIV C ---LQDVLMQ Site 955
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -K-----NIV R ---LHDVLHS Site 955
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -P-----NIV Q ---LKAFYYS Site 955
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -P-----NVV S ---LRTVLHT Site 955
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -P-----NIV K ---LKYFFYS Site 955
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -E-----NVI G ---LLDVFTP Site 955
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -P-----NVV G ---LYDIVQD Site 955
Kluyveromyces.waltii.IME2 -R-----NLV Q ---IWELFID Site 955
Debaryomyces.hansenii.SKY1 -E-----HAI Q ---LLDTFTH Site 955
Saccharomyces.cerevisiae.IME2 -D-----HLI Q ---IFEVFID Site 955
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1769
in 'msaprobs'
muscle

The residue for every species at site 1769 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -P-----NVV R ---LFDVCTV Site 955
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -T-----NII N ---LIDTVKD Site 955
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -D-----NIV K ---VFEILGP Site 955
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -P-----NVV R ---LFDVCTV Site 955
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -P-----NTV G ---LQYYFYE Site 955
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -E-----NVI G ---LLDVFTP Site 955
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -E-----NLV N ---LIEVFRQ Site 955
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -K-----NII G ---LLNVFTP Site 955
Candida.albicans.IME2 -P-----CLV Q ---IYEMFID Site 955
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -P-----NIV K ---LMDVCAS Site 955
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -D-----NIV Q ---IKEIVLG Site 955
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -E-----NVI G ---LLDVFTP Site 955
Kluyveromyces.lactis.IME2 -K-----NLV T ---IYEMFID Site 955
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -D-----NII A ---IKDILRP Site 955
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -K-----NII S ---LLNVFTP Site 955
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -E-----NVI G ---LLDVFTP Site 955
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -V-----GFP R ---IRHHGKE Site 955
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -E-----NVI G ---LLDVFTP Site 955
Amphimedon.queenslandica.CDK1 -V-----NIV S ---LLDVLYC Site 955
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -P-----NLV N ---LIEVFRR Site 955
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -P-----NIV R ---LLDVIHS Site 955
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -P-----NIV T ---VREIVVG Site 955
Neurospora.crassa.IME2 -P-----HLV P ---ALDIFLD Site 955
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -K-----NIV R ---LIDVLHS Site 955
Dictyostelium.discoideum.DYRK2..Probable.serine.th -A-----SIV H ---LNNYFYF Site 955
Species Residue at Site 1769
in 'msaprobs'
muscle

The residue for every species at site 1769 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -P-----NVV R ---LMDVCAT Site 955
Hydra.magnipapillata.CDK1 -P-----NIV Q ---LLDVIQS Site 955
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -P-----NIV E ---LKEVVVG Site 955
Ashbya.gossypii.IME2 -A-----HLV Q ---IYELFID Site 955
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi SD-----KII R ---LYDYEIT Site 955
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -M-----NVI H ---MLESFTF Site 955
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -I-----NII D ---LKYFFYE Site 955
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -P-----NII K ---LLNVIRA Site 955
Schizosaccharomyces.pombe.b.IME2 -P-----CLI D ---LLETFMD Site 955
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -E-----NII G ---INDIIRA Site 955
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -Y-----NFV R ---AYECFQH Site 955
Schizosaccharomyces.pombe.CDK1 RS-----NCV R ---LLDILHA Site 955
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -F-----LCV Q ---MYDWFDY Site 955
Saccoglossus.kowalevskii.CDK1 -P-----NIV R ---LLDVVHS Site 955
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -V-----GIP T ---IRWCGAE Site 955
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -K-----NII G ---LLNVFTP Site 955
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -P-----NII K ---LLDVVHR Site 955
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -P-----NLS L ---YHEMFIM Site 955
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -P-----NIV R ---LLDVVHN Site 955
Yarrowia.lipolytica.IME2 -R-----FLV N ---VHDMFVD Site 955
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -K-----HLT T ---LVEIFLE Site 955
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -P-----NIV K ---LHDVIHT Site 955
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -N-----NVA P ---LCDAIRY Site 955
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -P-----NIV Q ---LKAFYYS Site 955
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -P-----NIV D ---LIAYYYT Site 955
Species Residue at Site 1769
in 'msaprobs'
muscle

The residue for every species at site 1769 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -Y-----NIV T ---LKGHFVH Site 955
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -D-----NVL S ---ALDILQP Site 955
Scheffersomyces.stipitis.SKY1 -E-----HVI Q ---LLDTFTH Site 955
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -K-----NIV R ---LHDVLHS Site 955

Generated by PhyloBot at 15:34, October 23rd 2019
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