cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 1767 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1767 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1767 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1767 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1767
in 'msaprobs'
muscle

The residue for every species at site 1767 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---D-----N I VN---IFDLY Site 953
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---K-----C V AR---LLDHF Site 953
Danio.rerio.CDK1 ---P-----N I VK---LRDVI Site 953
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---E-----N V VA---IRDIV Site 953
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---K-----N I VR---LHDVL Site 953
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---K-----N V VR---LLDVL Site 953
Candida.guilliermondii.IME2 ---I-----N L LH---IYEVF Site 953
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---T-----G I PH---LKWFG Site 954
Chlamydomonas.reinhardtii.LF4 ---A-----N I IK---LLEVL Site 953
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---P-----N I IK---LIAFF Site 953
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---V-----G F PR---IRHHG Site 956
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---P-----G I PQ---EYYFG Site 953
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---P-----N V IS---LQKVF Site 953
Schizosaccharomyces.octosporus.b.IME2 ---P-----S L ID---LLETF Site 953
Candida.albicans.MAPK3..Extracellular.signal.regul ---E-----N I IS---ILAIQ Site 953
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---P-----N I VK---LLDVV Site 953
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---Q-----P V VGFPTVKWYG Site 953
Suberites.domuncula.JNK..Stress.activated.protein. ---K-----N I IG---LKNLF Site 953
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---F-----L C VL---MSDWF Site 953
Aedes.aegypti.CDK1 ---P-----N I VS---LEDVL Site 953
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---F-----R C VQ---MLEWF Site 953
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---N-----L C VQ---MFDWF Site 953
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---Y-----N V VH---MKDFF Site 953
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---Y-----N F VR---SYECF Site 953
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---P-----N L VN---LLEVF Site 953
Species Residue at Site 1767
in 'msaprobs'
muscle

The residue for every species at site 1767 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---P-----T I VS---LDDVI Site 953
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---T-----N I IK---LIDTV Site 953
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---E-----N I ID---IRDIL Site 953
Strongylocentrotus.purpuratus.CDK1 ---K-----N I VK---LHDVV Site 953
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---T-----G I AN---IKWCG Site 953
Drosophila.melanogaster.CDK1 ---E-----N I VC---LEDVL Site 953
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---V-----G L PK---LYYYS Site 953
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---I-----G I PA---VKWFG Site 954
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---K-----C V VR---LIDHF Site 953
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---A-----N I VT---LHDLI Site 953
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---A-----N I VT---LHDII Site 953
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---K-----N I IS---LLNVF Site 953
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---E-----N L VN---LLEVC Site 953
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---K-----N I IS---LLNVF Site 953
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---E-----N V IG---LLDVF Site 953
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---D-----N V LS---ALDIL Site 953
Bombus.terrestris.CDK1 ---P-----N I VQ---LFDVV Site 953
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---E-----M V VQ---LLDDF Site 953
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---E-----N L VS---LLEVY Site 953
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---K-----N I IG---LLNVF Site 953
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---R-----S V VN---MKEIV Site 953
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---P-----N I LA---LHEVV Site 953
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---P-----N I VM---LKNYF Site 953
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---P-----N I VQ---LQSYF Site 953
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---V-----G F PR---IRHHG Site 953
Species Residue at Site 1767
in 'msaprobs'
muscle

The residue for every species at site 1767 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---T-----G V PN---VKWFG Site 954
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---ENADEFN F VR---AFECF Site 953
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---P-----N I VK---LLDVV Site 953
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---D-----N V LS---ALDIL Site 953
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---P-----N L VN---LLEVF Site 953
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---Y-----N F VR---AYECF Site 953
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---P-----N I VT---VREIV Site 953
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---D-----N I VE---LKEAF Site 953
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---N-----L C VQ---MFDWF Site 953
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---P-----N I VT---VREIV Site 953
Naegleria.gruberi.LF4 ---D-----N V IS---LLEVV Site 953
Saccharomyces.bayanus.IME2 ---D-----H L IQ---IFEVF Site 953
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---T-----N I IK---LIDTV Site 953
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---D-----N V IG---LVDVF Site 953
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---D-----N V VN---LLDIF Site 953
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---Y-----K I IK---LKHHF Site 953
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---Y-----Y I VH---LKRHF Site 953
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---M-----N V IH---MLENF Site 953
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---E-----N I VE---LKEAF Site 953
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---P-----N I IR---LLDVI Site 953
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific --SD-----Q I IK---LYDYE Site 953
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---H-----N V VH---MKDFF Site 953
Aspergillus.nidulans.IME2 ---P-----H L VP---ALDIF Site 953
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---D-----N V MG---LKYCF Site 953
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---D-----N V LS---LLDIL Site 953
Species Residue at Site 1767
in 'msaprobs'
muscle

The residue for every species at site 1767 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---A-----N V IK---LKEVI Site 953
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---P-----N I VK---LLDVI Site 953
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---K-----N I IS---LLNVF Site 953
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---P-----N V VC---LKHCF Site 953
Penicillium.marneffei.IME2 ---T-----H I VP---ALDIF Site 953
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---E-----N V IG---LLDVF Site 953
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---D-----N I VK---VYEVL Site 953
Drosophila.melanogaster.MAK ---P-----N I VK---LKEVI Site 953
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---Q-----H I IH---YERHF Site 953
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---F-----H C LR---LFRHF Site 953
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---Q-----S V VN---MKEIV Site 953
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---E-----N I VK---LLDVC Site 953
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---P-----N I VE---LKEVV Site 953
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---K-----N I IS---LLNVF Site 953
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---K-----N I IS---LLNVF Site 953
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---F-----R C VQ---MLEWF Site 953
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---D-----N V MG---VKYCF Site 953
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---V-----G F PR---IRHHG Site 953
Candida.parapsilosis.IME2 ---P-----N L VQ---IFEIF Site 953
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---E-----N I VS---LVQVL Site 953
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---C-----N I VR---LRYFF Site 953
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---K-----N I IS---LLNVF Site 953
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---P-----N I IT---LADIV Site 953
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---F-----R C VQ---MLEWF Site 953
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---D-----N I VK---VYEVL Site 953
Species Residue at Site 1767
in 'msaprobs'
muscle

The residue for every species at site 1767 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---A-----N I VT---LHDII Site 953
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---P-----N I IT---LADIV Site 953
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---R-----N I TK---LVETI Site 953
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---E-----N V IG---LLDVF Site 953
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---Y-----Y I VH---LKRHF Site 953
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---T-----N I IT---LLDVV Site 953
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---S-----N I VA---LKHCF Site 953
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---I-----N I VS---LKNSF Site 953
Candida.orthopsilosis.IME2 ---P-----N L VQ---IFEIF Site 953
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ------LDAF  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---K-----N I IG---LLNAF Site 953
Debaryomyces.hansenii.IME2 ---P-----S L VQ---IYDMF Site 953
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---P-----N I VK---LKHCF Site 953
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---K-----H L TK---LVEIF Site 953
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---D-----N I VT---LFDII Site 953
Caenorhabditis.briggsae.CDK1 ---P-----N V VG---LEAVI Site 953
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---T-----N I IT---LLAVV Site 953
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---Q-----Y V VQ---LKAVF Site 953
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---M-----N V IH---MLESF Site 953
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---P-----N V VR---LFDVC Site 953
Monosiga.brevicollis.CDK1 ---P-----N I VS---LQDVV Site 953
Saccharomyces.cerevisiae.SKY1 ---N-----H I LK---LLDHF Site 953
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---E-----N I IS---ILDIQ Site 953
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---E-----N L VN---LLEVF Site 953
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---C-----N I VK---LLYFF Site 953
Species Residue at Site 1767
in 'msaprobs'
muscle

The residue for every species at site 1767 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---I-----G V PK---VYWYG Site 956
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---P-----N I IS---LLDVI Site 953
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---E-----N L VN---LLEVC Site 953
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---P-----N I VS---LLEVV Site 953
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---E-----N I VE---LKEAF Site 953
Ajellomyces.capsulatus.CDK1 ---P-----N I VR---LLNIV Site 953
Dictystelium.discoideum.MAPK3..Extracellular.signa ---E-----N L IS---IKDIL Site 953
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---P-----N V VR---LFDVC Site 953
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---P-----N I VE---LKEVV Site 953
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---K-----N I IG---LLNVF Site 953
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---E-----N V IG---LLDVF Site 953
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---A-----N I VK---LYEVC Site 953
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---D-----N V LS---ALDIL Site 953
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---K-----N I IS---LLNVF Site 953
Saccharomyces.cerevisiae.CDK1 ---D-----N I VR---LYDIV Site 953
Lodderomyces.elongisporus.IME2 ---P-----C L VQ---VFEVF Site 953
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---E-----N V IG---LLDVF Site 953
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---H-----L C VQ---MYDWF Site 953
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---E-----N I VE---LKEAF Site 953
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---P-----N L ID---LKYYF Site 953
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---P-----N I VR---LVDIF Site 953
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---F-----R C VQ---MLEWF Site 953
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---Y-----N F VR---AYECF Site 953
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---P-----N L VN---LLEVF Site 953
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---C-----N I VR---LRYFF Site 953
Species Residue at Site 1767
in 'msaprobs'
muscle

The residue for every species at site 1767 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---P-----N V VG---LEAVI Site 953
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---P-----N V VR---LMDVC Site 953
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---R-----N L VS---LREVI Site 953
Salmo.salar.CDK1 ---P-----N I VE---LRDVI Site 953
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---P-----N I IG---LLDAF Site 953
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---Q-----Y V VQ---LKAVF Site 953
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi --SD-----K I IR---LYDYE Site 953
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---C-----N I VR---LRYFF Site 953
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---A-----H I SV---YQELF Site 953
Aspergillus.fumigatus.IME2 ---P-----H L VP---ALDIF Site 953
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---P-----N V IS---LQKVF Site 953
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---Y-----H C VQ---MLEWF Site 953
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---E-----N V IG---LLDVF Site 953
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---D-----N V LS---LLDIL Site 953
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---Y-----N F VR---AYECF Site 953
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---E-----N V IG---IRDIL Site 953
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---A-----N I VT---LHDIV Site 953
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---P-----N I VE---LKEVV Site 953
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---P-----N L VN---LMEVF Site 953
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---K-----N I IG---LLNAF Site 953
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---E-----N V IG---LVDVF Site 953
Candida.glabrata.IME2 ---K-----H L IQ---VYEIF Site 953
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---A-----N V IK---LKEVI Site 953
Schizosaccharomyces.pombe.IME2 ---E-----N I VN---IFDLY Site 953
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---E-----N I IS---ILAIQ Site 953
Species Residue at Site 1767
in 'msaprobs'
muscle

The residue for every species at site 1767 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---K-----N I VR---LYDVL Site 953
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---A-----H V IR---FLEFF Site 953
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---V-----G I PH---IRWYG Site 956
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---A-----N I VT---LHDLI Site 953
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---P-----N L VN---LIEVF Site 953
Branchiostoma.floridae.CDK1 ---P-----N I VR---LLDVV Site 953
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---N-----L C VR---MFDWF Site 953
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---P-----N I VD---LIAYY Site 953
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---E-----N L VN---MLEHA Site 953
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---P-----N I VK---LKYFF Site 953
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---P-----N I VE---LKDVV Site 953
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---A-----N V VK---LKEVI Site 953
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---F-----L C VL---MSDWF Site 953
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---Y-----Y I VH---LKRHF Site 953
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---P-----N I VK---LLDVI Site 953
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---D-----N I IA---IKDIL Site 953
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---E-----N V IG---LLDVF Site 953
Lachancea.thermotolerans.SKY1 ---K-----H I LS---LLDSF Site 953
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---D-----N I VK---VFEIL Site 953
Dictyostelium.discoideum.CDK1 ---P-----N V VS---LFDVL Site 953
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---E-----N V IG---LLDVF Site 953
Xenopus.tropicalis.IME2 ---P-----N I VK---LLDVI Site 953
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---Y-----N F VR---SYECF Site 953
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---P-----N I IT---LADIV Site 953
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---P-----N I VK---LLDVI Site 953
Species Residue at Site 1767
in 'msaprobs'
muscle

The residue for every species at site 1767 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---P-----N I VR---LLDVV Site 953
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---A-----N I VL---LHDIV Site 953
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---E-----N I IK---LLNVI Site 953
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---Y-----Y I VH---LKRHF Site 953
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---C-----N I VR---LRYFF Site 953
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---D-----N I IT---LKWFF Site 953
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---E-----N I VK---LESVA Site 953
Encephalitozoon.cuniculi.CDK1 ---S-----T I VE---LSDVI Site 953
Saccharomyces.kluyveri.IME2 ---K-----H L VQ---IYELF Site 953
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---F-----R C VQ---MLEWF Site 953
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---E-----N I IG---INDII Site 953
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---A-----N I VL---LHDII Site 953
Cryptococcus.neoformans.IME2 ---P-----A I IP---LYDAF Site 953
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---A-----H V IR---FLEFF Site 953
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---E-----M V VQ---LLDDF Site 953
Candida.lusitaniae.IME2 ---P-----N L LQ---IYNLF Site 953
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---Y-----N F VR---SYECF Site 953
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---P-----N V IN---LIRVF Site 953
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---Q-----Y V VK---LKDVF Site 953
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---M-----N L VN---LLEVF Site 953
Gallus.gallus.CDK2 ---P-----N I VK---LLDVI Site 953
Emericella.nidulans.CDK1 ---P-----N I VR---LLNIV Site 953
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---P-----N I LM---LHEVV Site 953
Homo.sapiens.CDK1 ---P-----N I VS---LQDVL Site 953
Candida.albicans.CDK1 ---D-----N I VR---LYDII Site 953
Species Residue at Site 1767
in 'msaprobs'
muscle

The residue for every species at site 1767 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---P-----N I IT---LLDII Site 953
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---D-----N I IA---IKDIL Site 953
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---A-----N I VK---LKEVI Site 953
Saccharomyces.castelli.IME2 ---K-----H L IQ---IFEIF Site 953
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---Y-----G C VR---MLDWF Site 953
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---P-----N I IG---LLDAF Site 953
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---A-----N I VL---LHDII Site 953
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---P-----N I VR---LKHCF Site 953
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---S-----R V AP---LCDAK Site 953
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---P-----N I IG---LLDAF Site 953
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---E-----N V VN---LIEIC Site 953
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---Y-----N F VR---AYECF Site 953
Acyrthosiphon.pisum.CDK1 ---E-----N V VK---LYDVI Site 953
Candida.tropicalis.CDK1 ---P-----C L VQ---IFEMF Site 953
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---Q-----N V IT---LIRVF Site 953
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---C-----N I VR---LQYFF Site 953
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---T-----N I IT---LQAVV Site 953
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---A-----N I VT---LHDII Site 953
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---P-----N I VK---LLDVV Site 953
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---A-----N I VT---LHDIV Site 953
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---E-----N V IG---LLDVF Site 953
Candida.albicans.SSN3..Serine.threonine.protein.ki ---K-----N I TK---LVDII Site 953
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---G-----N I IK---LLEVL Site 953
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---H-----N I VK---LKYFF Site 953
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---E-----N V IG---LLDVF Site 953
Species Residue at Site 1767
in 'msaprobs'
muscle

The residue for every species at site 1767 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---E-----N I IP---LSDMT Site 953
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---P-----N I IT---LADIV Site 953
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---F-----N F VR---AYECF Site 953
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---P-----N I VT---VREIV Site 953
Candida.dubliniensis.IME2 ---P-----C L VQ---IYEMF Site 953
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---K-----N I IS---LLNVF Site 953
Aspergillus.niger.IME2 ---P-----H L VP---ALDIF Site 953
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---E-----N V IG---LLDVF Site 953
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---E-----N L VN---LIEVF Site 953
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---A-----N I VL---LHDII Site 953
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---P-----N I IT---LADIV Site 953
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---Y-----N I VT---LKGHF Site 953
Schizosaccharomyces.japonicus.IME2 ---D-----N V VK---VFELI Site 953
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---K-----N I IG---ILNCF Site 953
Gallus.gallus.CDK1 ---P-----N I VC---LQDVL Site 953
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---K-----N I VR---LHDVL Site 953
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---P-----N I VQ---LKAFY Site 953
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---P-----N V VS---LRTVL Site 953
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---P-----N I VK---LKYFF Site 953
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---E-----N V IG---LLDVF Site 953
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---P-----N V VG---LYDIV Site 953
Kluyveromyces.waltii.IME2 ---R-----N L VQ---IWELF Site 953
Debaryomyces.hansenii.SKY1 ---E-----H A IQ---LLDTF Site 953
Saccharomyces.cerevisiae.IME2 ---D-----H L IQ---IFEVF Site 953
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1767
in 'msaprobs'
muscle

The residue for every species at site 1767 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---P-----N V VR---LFDVC Site 953
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---T-----N I IN---LIDTV Site 953
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---D-----N I VK---VFEIL Site 953
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---P-----N V VR---LFDVC Site 953
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---P-----N T VG---LQYYF Site 953
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---E-----N V IG---LLDVF Site 953
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---E-----N L VN---LIEVF Site 953
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---K-----N I IG---LLNVF Site 953
Candida.albicans.IME2 ---P-----C L VQ---IYEMF Site 953
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---P-----N I VK---LMDVC Site 953
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---D-----N I VQ---IKEIV Site 953
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---E-----N V IG---LLDVF Site 953
Kluyveromyces.lactis.IME2 ---K-----N L VT---IYEMF Site 953
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---D-----N I IA---IKDIL Site 953
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---K-----N I IS---LLNVF Site 953
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---E-----N V IG---LLDVF Site 953
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---V-----G F PR---IRHHG Site 953
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---E-----N V IG---LLDVF Site 953
Amphimedon.queenslandica.CDK1 ---V-----N I VS---LLDVL Site 953
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---P-----N L VN---LIEVF Site 953
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---P-----N I VR---LLDVI Site 953
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---P-----N I VT---VREIV Site 953
Neurospora.crassa.IME2 ---P-----H L VP---ALDIF Site 953
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---K-----N I VR---LIDVL Site 953
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---A-----S I VH---LNNYF Site 953
Species Residue at Site 1767
in 'msaprobs'
muscle

The residue for every species at site 1767 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---P-----N V VR---LMDVC Site 953
Hydra.magnipapillata.CDK1 ---P-----N I VQ---LLDVI Site 953
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---P-----N I VE---LKEVV Site 953
Ashbya.gossypii.IME2 ---A-----H L VQ---IYELF Site 953
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi --SD-----K I IR---LYDYE Site 953
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---M-----N V IH---MLESF Site 953
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---I-----N I ID---LKYFF Site 953
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---P-----N I IK---LLNVI Site 953
Schizosaccharomyces.pombe.b.IME2 ---P-----C L ID---LLETF Site 953
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---E-----N I IG---INDII Site 953
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---Y-----N F VR---AYECF Site 953
Schizosaccharomyces.pombe.CDK1 NNRS-----N C VR---LLDIL Site 953
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---F-----L C VQ---MYDWF Site 953
Saccoglossus.kowalevskii.CDK1 ---P-----N I VR---LLDVV Site 953
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---V-----G I PT---IRWCG Site 953
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---K-----N I IG---LLNVF Site 953
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---P-----N I IK---LLDVV Site 953
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---P-----N L SL---YHEMF Site 953
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---P-----N I VR---LLDVV Site 953
Yarrowia.lipolytica.IME2 ---R-----F L VN---VHDMF Site 953
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---K-----H L TT---LVEIF Site 953
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---P-----N I VK---LHDVI Site 953
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---N-----N V AP---LCDAI Site 953
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---P-----N I VQ---LKAFY Site 953
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---P-----N I VD---LIAYY Site 953
Species Residue at Site 1767
in 'msaprobs'
muscle

The residue for every species at site 1767 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---Y-----N I VT---LKGHF Site 953
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---D-----N V LS---ALDIL Site 953
Scheffersomyces.stipitis.SKY1 ---E-----H V IQ---LLDTF Site 953
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---K-----N I VR---LHDVL Site 953

Generated by PhyloBot at 02:36, October 16th 2019
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