cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 1766 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1766 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1766 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1766 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1766
in 'msaprobs'
muscle

The residue for every species at site 1766 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ----D----- N IVN---IFDL Site 952
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ----K----- C VAR---LLDH Site 952
Danio.rerio.CDK1 ----P----- N IVK---LRDV Site 952
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ----E----- N VVA---IRDI Site 952
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ----K----- N IVR---LHDV Site 952
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ----K----- N VVR---LLDV Site 952
Candida.guilliermondii.IME2 ----I----- N LLH---IYEV Site 952
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ----T----- G IPH---LKWF Site 953
Chlamydomonas.reinhardtii.LF4 ----A----- N IIK---LLEV Site 952
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ----P----- N IIK---LIAF Site 952
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ----V----- G FPR---IRHH Site 955
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ----P----- G IPQ---EYYF Site 952
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ----P----- N VIS---LQKV Site 952
Schizosaccharomyces.octosporus.b.IME2 ----P----- S LID---LLET Site 952
Candida.albicans.MAPK3..Extracellular.signal.regul ----E----- N IIS---ILAI Site 952
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ----P----- N IVK---LLDV Site 952
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ----Q----- P VVGFPTVKWY Site 952
Suberites.domuncula.JNK..Stress.activated.protein. ----K----- N IIG---LKNL Site 952
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ----F----- L CVL---MSDW Site 952
Aedes.aegypti.CDK1 ----P----- N IVS---LEDV Site 952
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ----F----- R CVQ---MLEW Site 952
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ----N----- L CVQ---MFDW Site 952
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ----Y----- N VVH---MKDF Site 952
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ----Y----- N FVR---SYEC Site 952
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ----P----- N LVN---LLEV Site 952
Species Residue at Site 1766
in 'msaprobs'
muscle

The residue for every species at site 1766 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ----P----- T IVS---LDDV Site 952
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ----T----- N IIK---LIDT Site 952
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ----E----- N IID---IRDI Site 952
Strongylocentrotus.purpuratus.CDK1 ----K----- N IVK---LHDV Site 952
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ----T----- G IAN---IKWC Site 952
Drosophila.melanogaster.CDK1 ----E----- N IVC---LEDV Site 952
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ----V----- G LPK---LYYY Site 952
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ----I----- G IPA---VKWF Site 953
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ----K----- C VVR---LIDH Site 952
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ----A----- N IVT---LHDL Site 952
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ----A----- N IVT---LHDI Site 952
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ----K----- N IIS---LLNV Site 952
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ----E----- N LVN---LLEV Site 952
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ----K----- N IIS---LLNV Site 952
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ----E----- N VIG---LLDV Site 952
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ----D----- N VLS---ALDI Site 952
Bombus.terrestris.CDK1 ----P----- N IVQ---LFDV Site 952
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ----E----- M VVQ---LLDD Site 952
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ----E----- N LVS---LLEV Site 952
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ----K----- N IIG---LLNV Site 952
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ----R----- S VVN---MKEI Site 952
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ----P----- N ILA---LHEV Site 952
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ----P----- N IVM---LKNY Site 952
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ----P----- N IVQ---LQSY Site 952
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ----V----- G FPR---IRHH Site 952
Species Residue at Site 1766
in 'msaprobs'
muscle

The residue for every species at site 1766 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ----T----- G VPN---VKWF Site 953
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ----ENADEF N FVR---AFEC Site 952
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ----P----- N IVK---LLDV Site 952
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ----D----- N VLS---ALDI Site 952
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ----P----- N LVN---LLEV Site 952
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ----Y----- N FVR---AYEC Site 952
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ----P----- N IVT---VREI Site 952
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ----D----- N IVE---LKEA Site 952
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ----N----- L CVQ---MFDW Site 952
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ----P----- N IVT---VREI Site 952
Naegleria.gruberi.LF4 ----D----- N VIS---LLEV Site 952
Saccharomyces.bayanus.IME2 ----D----- H LIQ---IFEV Site 952
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ----T----- N IIK---LIDT Site 952
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ----D----- N VIG---LVDV Site 952
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ----D----- N VVN---LLDI Site 952
Dictyostelium.discoideum.DYRK1..Probable.serine.th ----Y----- K IIK---LKHH Site 952
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ----Y----- Y IVH---LKRH Site 952
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ----M----- N VIH---MLEN Site 952
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ----E----- N IVE---LKEA Site 952
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ----P----- N IIR---LLDV Site 952
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---SD----- Q IIK---LYDY Site 952
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ----H----- N VVH---MKDF Site 952
Aspergillus.nidulans.IME2 ----P----- H LVP---ALDI Site 952
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ----D----- N VMG---LKYC Site 952
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ----D----- N VLS---LLDI Site 952
Species Residue at Site 1766
in 'msaprobs'
muscle

The residue for every species at site 1766 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ----A----- N VIK---LKEV Site 952
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ----P----- N IVK---LLDV Site 952
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ----K----- N IIS---LLNV Site 952
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ----P----- N VVC---LKHC Site 952
Penicillium.marneffei.IME2 ----T----- H IVP---ALDI Site 952
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ----E----- N VIG---LLDV Site 952
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ----D----- N IVK---VYEV Site 952
Drosophila.melanogaster.MAK ----P----- N IVK---LKEV Site 952
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ----Q----- H IIH---YERH Site 952
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ----F----- H CLR---LFRH Site 952
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ----Q----- S VVN---MKEI Site 952
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ----E----- N IVK---LLDV Site 952
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ----P----- N IVE---LKEV Site 952
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ----K----- N IIS---LLNV Site 952
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ----K----- N IIS---LLNV Site 952
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ----F----- R CVQ---MLEW Site 952
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ----D----- N VMG---VKYC Site 952
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ----V----- G FPR---IRHH Site 952
Candida.parapsilosis.IME2 ----P----- N LVQ---IFEI Site 952
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ----E----- N IVS---LVQV Site 952
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ----C----- N IVR---LRYF Site 952
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ----K----- N IIS---LLNV Site 952
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ----P----- N IIT---LADI Site 952
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ----F----- R CVQ---MLEW Site 952
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ----D----- N IVK---VYEV Site 952
Species Residue at Site 1766
in 'msaprobs'
muscle

The residue for every species at site 1766 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ----A----- N IVT---LHDI Site 952
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ----P----- N IIT---LADI Site 952
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ----R----- N ITK---LVET Site 952
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ----E----- N VIG---LLDV Site 952
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ----Y----- Y IVH---LKRH Site 952
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ----T----- N IIT---LLDV Site 952
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ----S----- N IVA---LKHC Site 952
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ----I----- N IVS---LKNS Site 952
Candida.orthopsilosis.IME2 ----P----- N LVQ---IFEI Site 952
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - -------LDA  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ----K----- N IIG---LLNA Site 952
Debaryomyces.hansenii.IME2 ----P----- S LVQ---IYDM Site 952
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ----P----- N IVK---LKHC Site 952
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ----K----- H LTK---LVEI Site 952
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ----D----- N IVT---LFDI Site 952
Caenorhabditis.briggsae.CDK1 ----P----- N VVG---LEAV Site 952
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ----T----- N IIT---LLAV Site 952
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ----Q----- Y VVQ---LKAV Site 952
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ----M----- N VIH---MLES Site 952
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ----P----- N VVR---LFDV Site 952
Monosiga.brevicollis.CDK1 ----P----- N IVS---LQDV Site 952
Saccharomyces.cerevisiae.SKY1 ----N----- H ILK---LLDH Site 952
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ----E----- N IIS---ILDI Site 952
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ----E----- N LVN---LLEV Site 952
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ----C----- N IVK---LLYF Site 952
Species Residue at Site 1766
in 'msaprobs'
muscle

The residue for every species at site 1766 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ----I----- G VPK---VYWY Site 955
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ----P----- N IIS---LLDV Site 952
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ----E----- N LVN---LLEV Site 952
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ----P----- N IVS---LLEV Site 952
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ----E----- N IVE---LKEA Site 952
Ajellomyces.capsulatus.CDK1 ----P----- N IVR---LLNI Site 952
Dictystelium.discoideum.MAPK3..Extracellular.signa ----E----- N LIS---IKDI Site 952
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ----P----- N VVR---LFDV Site 952
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ----P----- N IVE---LKEV Site 952
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ----K----- N IIG---LLNV Site 952
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ----E----- N VIG---LLDV Site 952
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ----A----- N IVK---LYEV Site 952
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ----D----- N VLS---ALDI Site 952
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ----K----- N IIS---LLNV Site 952
Saccharomyces.cerevisiae.CDK1 ----D----- N IVR---LYDI Site 952
Lodderomyces.elongisporus.IME2 ----P----- C LVQ---VFEV Site 952
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ----E----- N VIG---LLDV Site 952
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ----H----- L CVQ---MYDW Site 952
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ----E----- N IVE---LKEA Site 952
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ----P----- N LID---LKYY Site 952
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ----P----- N IVR---LVDI Site 952
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ----F----- R CVQ---MLEW Site 952
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ----Y----- N FVR---AYEC Site 952
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ----P----- N LVN---LLEV Site 952
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ----C----- N IVR---LRYF Site 952
Species Residue at Site 1766
in 'msaprobs'
muscle

The residue for every species at site 1766 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ----P----- N VVG---LEAV Site 952
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ----P----- N VVR---LMDV Site 952
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ----R----- N LVS---LREV Site 952
Salmo.salar.CDK1 ----P----- N IVE---LRDV Site 952
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ----P----- N IIG---LLDA Site 952
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ----Q----- Y VVQ---LKAV Site 952
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---SD----- K IIR---LYDY Site 952
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ----C----- N IVR---LRYF Site 952
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ----A----- H ISV---YQEL Site 952
Aspergillus.fumigatus.IME2 ----P----- H LVP---ALDI Site 952
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ----P----- N VIS---LQKV Site 952
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ----Y----- H CVQ---MLEW Site 952
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ----E----- N VIG---LLDV Site 952
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ----D----- N VLS---LLDI Site 952
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ----Y----- N FVR---AYEC Site 952
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ----E----- N VIG---IRDI Site 952
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ----A----- N IVT---LHDI Site 952
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ----P----- N IVE---LKEV Site 952
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ----P----- N LVN---LMEV Site 952
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ----K----- N IIG---LLNA Site 952
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ----E----- N VIG---LVDV Site 952
Candida.glabrata.IME2 ----K----- H LIQ---VYEI Site 952
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ----A----- N VIK---LKEV Site 952
Schizosaccharomyces.pombe.IME2 ----E----- N IVN---IFDL Site 952
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ----E----- N IIS---ILAI Site 952
Species Residue at Site 1766
in 'msaprobs'
muscle

The residue for every species at site 1766 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ----K----- N IVR---LYDV Site 952
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ----A----- H VIR---FLEF Site 952
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ----V----- G IPH---IRWY Site 955
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ----A----- N IVT---LHDL Site 952
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ----P----- N LVN---LIEV Site 952
Branchiostoma.floridae.CDK1 ----P----- N IVR---LLDV Site 952
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ----N----- L CVR---MFDW Site 952
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ----P----- N IVD---LIAY Site 952
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ----E----- N LVN---MLEH Site 952
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ----P----- N IVK---LKYF Site 952
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ----P----- N IVE---LKDV Site 952
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ----A----- N VVK---LKEV Site 952
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ----F----- L CVL---MSDW Site 952
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ----Y----- Y IVH---LKRH Site 952
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ----P----- N IVK---LLDV Site 952
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ----D----- N IIA---IKDI Site 952
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ----E----- N VIG---LLDV Site 952
Lachancea.thermotolerans.SKY1 ----K----- H ILS---LLDS Site 952
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ----D----- N IVK---VFEI Site 952
Dictyostelium.discoideum.CDK1 ----P----- N VVS---LFDV Site 952
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ----E----- N VIG---LLDV Site 952
Xenopus.tropicalis.IME2 ----P----- N IVK---LLDV Site 952
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ----Y----- N FVR---SYEC Site 952
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ----P----- N IIT---LADI Site 952
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ----P----- N IVK---LLDV Site 952
Species Residue at Site 1766
in 'msaprobs'
muscle

The residue for every species at site 1766 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ----P----- N IVR---LLDV Site 952
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ----A----- N IVL---LHDI Site 952
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ----E----- N IIK---LLNV Site 952
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ----Y----- Y IVH---LKRH Site 952
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ----C----- N IVR---LRYF Site 952
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ----D----- N IIT---LKWF Site 952
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ----E----- N IVK---LESV Site 952
Encephalitozoon.cuniculi.CDK1 ----S----- T IVE---LSDV Site 952
Saccharomyces.kluyveri.IME2 ----K----- H LVQ---IYEL Site 952
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ----F----- R CVQ---MLEW Site 952
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ----E----- N IIG---INDI Site 952
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ----A----- N IVL---LHDI Site 952
Cryptococcus.neoformans.IME2 ----P----- A IIP---LYDA Site 952
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ----A----- H VIR---FLEF Site 952
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ----E----- M VVQ---LLDD Site 952
Candida.lusitaniae.IME2 ----P----- N LLQ---IYNL Site 952
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ----Y----- N FVR---SYEC Site 952
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ----P----- N VIN---LIRV Site 952
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ----Q----- Y VVK---LKDV Site 952
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ----M----- N LVN---LLEV Site 952
Gallus.gallus.CDK2 ----P----- N IVK---LLDV Site 952
Emericella.nidulans.CDK1 ----P----- N IVR---LLNI Site 952
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ----P----- N ILM---LHEV Site 952
Homo.sapiens.CDK1 ----P----- N IVS---LQDV Site 952
Candida.albicans.CDK1 ----D----- N IVR---LYDI Site 952
Species Residue at Site 1766
in 'msaprobs'
muscle

The residue for every species at site 1766 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ----P----- N IIT---LLDI Site 952
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ----D----- N IIA---IKDI Site 952
Mus.musculus.ICK..Serine.threonine.protein.kinase. ----A----- N IVK---LKEV Site 952
Saccharomyces.castelli.IME2 ----K----- H LIQ---IFEI Site 952
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ----Y----- G CVR---MLDW Site 952
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ----P----- N IIG---LLDA Site 952
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ----A----- N IVL---LHDI Site 952
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ----P----- N IVR---LKHC Site 952
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ----S----- R VAP---LCDA Site 952
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ----P----- N IIG---LLDA Site 952
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ----E----- N VVN---LIEI Site 952
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ----Y----- N FVR---AYEC Site 952
Acyrthosiphon.pisum.CDK1 ----E----- N VVK---LYDV Site 952
Candida.tropicalis.CDK1 ----P----- C LVQ---IFEM Site 952
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ----Q----- N VIT---LIRV Site 952
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ----C----- N IVR---LQYF Site 952
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ----T----- N IIT---LQAV Site 952
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ----A----- N IVT---LHDI Site 952
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ----P----- N IVK---LLDV Site 952
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ----A----- N IVT---LHDI Site 952
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ----E----- N VIG---LLDV Site 952
Candida.albicans.SSN3..Serine.threonine.protein.ki ----K----- N ITK---LVDI Site 952
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ----G----- N IIK---LLEV Site 952
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ----H----- N IVK---LKYF Site 952
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ----E----- N VIG---LLDV Site 952
Species Residue at Site 1766
in 'msaprobs'
muscle

The residue for every species at site 1766 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ----E----- N IIP---LSDM Site 952
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ----P----- N IIT---LADI Site 952
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ----F----- N FVR---AYEC Site 952
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ----P----- N IVT---VREI Site 952
Candida.dubliniensis.IME2 ----P----- C LVQ---IYEM Site 952
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ----K----- N IIS---LLNV Site 952
Aspergillus.niger.IME2 ----P----- H LVP---ALDI Site 952
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ----E----- N VIG---LLDV Site 952
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ----E----- N LVN---LIEV Site 952
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ----A----- N IVL---LHDI Site 952
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ----P----- N IIT---LADI Site 952
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ----Y----- N IVT---LKGH Site 952
Schizosaccharomyces.japonicus.IME2 ----D----- N VVK---VFEL Site 952
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ----K----- N IIG---ILNC Site 952
Gallus.gallus.CDK1 ----P----- N IVC---LQDV Site 952
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ----K----- N IVR---LHDV Site 952
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ----P----- N IVQ---LKAF Site 952
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ----P----- N VVS---LRTV Site 952
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ----P----- N IVK---LKYF Site 952
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ----E----- N VIG---LLDV Site 952
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ----P----- N VVG---LYDI Site 952
Kluyveromyces.waltii.IME2 ----R----- N LVQ---IWEL Site 952
Debaryomyces.hansenii.SKY1 ----E----- H AIQ---LLDT Site 952
Saccharomyces.cerevisiae.IME2 ----D----- H LIQ---IFEV Site 952
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1766
in 'msaprobs'
muscle

The residue for every species at site 1766 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ----P----- N VVR---LFDV Site 952
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ----T----- N IIN---LIDT Site 952
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ----D----- N IVK---VFEI Site 952
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ----P----- N VVR---LFDV Site 952
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ----P----- N TVG---LQYY Site 952
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ----E----- N VIG---LLDV Site 952
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ----E----- N LVN---LIEV Site 952
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ----K----- N IIG---LLNV Site 952
Candida.albicans.IME2 ----P----- C LVQ---IYEM Site 952
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ----P----- N IVK---LMDV Site 952
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ----D----- N IVQ---IKEI Site 952
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ----E----- N VIG---LLDV Site 952
Kluyveromyces.lactis.IME2 ----K----- N LVT---IYEM Site 952
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ----D----- N IIA---IKDI Site 952
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ----K----- N IIS---LLNV Site 952
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ----E----- N VIG---LLDV Site 952
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ----V----- G FPR---IRHH Site 952
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ----E----- N VIG---LLDV Site 952
Amphimedon.queenslandica.CDK1 ----V----- N IVS---LLDV Site 952
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ----P----- N LVN---LIEV Site 952
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ----P----- N IVR---LLDV Site 952
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ----P----- N IVT---VREI Site 952
Neurospora.crassa.IME2 ----P----- H LVP---ALDI Site 952
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ----K----- N IVR---LIDV Site 952
Dictyostelium.discoideum.DYRK2..Probable.serine.th ----A----- S IVH---LNNY Site 952
Species Residue at Site 1766
in 'msaprobs'
muscle

The residue for every species at site 1766 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ----P----- N VVR---LMDV Site 952
Hydra.magnipapillata.CDK1 ----P----- N IVQ---LLDV Site 952
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ----P----- N IVE---LKEV Site 952
Ashbya.gossypii.IME2 ----A----- H LVQ---IYEL Site 952
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---SD----- K IIR---LYDY Site 952
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ----M----- N VIH---MLES Site 952
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ----I----- N IID---LKYF Site 952
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ----P----- N IIK---LLNV Site 952
Schizosaccharomyces.pombe.b.IME2 ----P----- C LID---LLET Site 952
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ----E----- N IIG---INDI Site 952
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ----Y----- N FVR---AYEC Site 952
Schizosaccharomyces.pombe.CDK1 ENNRS----- N CVR---LLDI Site 952
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ----F----- L CVQ---MYDW Site 952
Saccoglossus.kowalevskii.CDK1 ----P----- N IVR---LLDV Site 952
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ----V----- G IPT---IRWC Site 952
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ----K----- N IIG---LLNV Site 952
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ----P----- N IIK---LLDV Site 952
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ----P----- N LSL---YHEM Site 952
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ----P----- N IVR---LLDV Site 952
Yarrowia.lipolytica.IME2 ----R----- F LVN---VHDM Site 952
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ----K----- H LTT---LVEI Site 952
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ----P----- N IVK---LHDV Site 952
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ----N----- N VAP---LCDA Site 952
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ----P----- N IVQ---LKAF Site 952
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ----P----- N IVD---LIAY Site 952
Species Residue at Site 1766
in 'msaprobs'
muscle

The residue for every species at site 1766 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ----Y----- N IVT---LKGH Site 952
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ----D----- N VLS---ALDI Site 952
Scheffersomyces.stipitis.SKY1 ----E----- H VIQ---LLDT Site 952
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ----K----- N IVR---LHDV Site 952

Generated by PhyloBot at 02:20, October 16th 2019
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