cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 1734 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1734 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1734 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1734 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1734
in 'msaprobs'
muscle

The residue for every species at site 1734 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 REVHSLL--- H LS--E----- Site 926
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD DEIKILN--- A I---S---KY Site 926
Danio.rerio.CDK1 REISLLK--- E L---N----- Site 926
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge REIKLLR--- H M---D----- Site 926
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d REICLLK--- E L---K----- Site 926
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK REICLLR--- E L---R----- Site 926
Candida.guilliermondii.IME2 KEVQFIQ--- A MP--A----- Site 926
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ YESKLYM--- L L---Q---G- Site 926
Chlamydomonas.reinhardtii.LF4 REIQALR--- R LS--P----- Site 926
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g RELQIMR--- A I---S----- Site 926
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 YEAKLYR--- I L---S---G- Site 926
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 DEYRTYK--- I L---A---G- Site 923
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho REIALLR--- E L---K----- Site 926
Schizosaccharomyces.octosporus.b.IME2 ------R--- Q IS--K----- Site 868
Candida.albicans.MAPK3..Extracellular.signal.regul RELKLLK--- H F---N----- Site 926
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. REIKILQ--- N L---C---G- Site 926
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 YESKIYR--- Y L---AISPC- Site 926
Suberites.domuncula.JNK..Stress.activated.protein. RELRLMK--- M V---D----- Site 926
Homo.sapiens.CLK3..Dual.specificity.protein.kinase LEINVLK--- K I---K---EK Site 926
Aedes.aegypti.CDK1 REISLLK--- E L---K----- Site 926
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci SEIQVLE--- H L---N---TT Site 926
Homo.sapiens.CLK2..Dual.specificity.protein.kinase LEINVLE--- K I---N---EK Site 926
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos MELKILE--- A L---R---KK Site 926
Homo.sapiens.HIPK1..Homeodomain.interacting.protei IEVSILS--- R L---S---SE Site 926
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar REVRMLK--- Q L---K----- Site 926
Species Residue at Site 1734
in 'msaprobs'
muscle

The residue for every species at site 1734 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 REILLLK--- N L---K----- Site 926
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. REVKILE--- N L---R---G- Site 926
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM REITILT--- R F---K----- Site 926
Strongylocentrotus.purpuratus.CDK1 REIALLK--- E L---D----- Site 926
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca YEAKLYN--- A L---Q---G- Site 926
Drosophila.melanogaster.CDK1 REISLLK--- E L---K----- Site 926
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 YEAKLYK--- I F---D---G- Site 926
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. FESKLYK--- I F---Q---G- Site 926
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH HEIEFLS--- A A---A---DG Site 926
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d REVSLLK--- N L---K----- Site 926
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. REASLLR--- G L---K----- Site 926
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET RELVLMK--- C V---N----- Site 926
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 REIKLLK--- Q L---R----- Site 926
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U RELVLMK--- C V---N----- Site 926
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. RELLLLK--- H M---Q----- Site 926
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo RELKMLC--- F F---K----- Site 926
Bombus.terrestris.CDK1 REISLLR--- E L---T----- Site 926
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 DEIRLLK--- S V---R---NS Site 926
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar REIKLLK--- Q L---R----- Site 926
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. RELVLMK--- C V---N----- Site 926
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d REIKILR--- Q L---I----- Site 926
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. REIQALR--- R LN--P----- Site 926
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. RELQIMQHLA R L---R----- Site 935
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G RELQIMQDLA V L---H----- Site 935
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 YEAKLYR--- I L---S---G- Site 926
Species Residue at Site 1734
in 'msaprobs'
muscle

The residue for every species at site 1734 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 YESKLYR--- I L---Q---G- Site 926
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO IEVSILS--- R L---S----- Site 926
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C REIKILQ--- N L---C---G- Site 926
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl RELKMLC--- F F---K----- Site 926
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 REIRMLK--- Q L---K----- Site 926
Homo.sapiens.HIPK3..Homeodomain.interacting.protei IEVSILA--- R L---S---TE Site 926
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O REINTIL--- K A---Q----- Site 926
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d RELKMLR--- T L---K----- Site 926
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci LEINVLE--- K I---N---EK Site 926
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O REINTIL--- K A---Q----- Site 926
Naegleria.gruberi.LF4 REIQALK--- I LS--P----- Site 926
Saccharomyces.bayanus.IME2 REIKFIL--- A IP--A----- Site 926
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. REVKILE--- N L---R---G- Site 926
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a RELRLLK--- H M---K----- Site 926
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki REIKILQ--- E L---K----- Site 926
Dictyostelium.discoideum.DYRK1..Probable.serine.th IEIRLLE--- L M---N---NK Site 926
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos IELRLLE--- L M---N---QH Site 926
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos EEIRILE--- H L---R---KQ Site 926
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d RELKMLR--- T L---K----- Site 926
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a REIMLLK--- E FG--G----- Site 926
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific NEIEHLN--- H L---Q---Q- Site 926
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos VELKILE--- A L---R---RK Site 926
Aspergillus.nidulans.IME2 REVIFLR--- T LP--P----- Site 926
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi AELQCLT--- V A---G---G- Site 926
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se REIKMLS--- S F---R----- Site 926
Species Residue at Site 1734
in 'msaprobs'
muscle

The residue for every species at site 1734 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. REVKSLK--- K L---N----- Site 926
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep REISLLK--- E L---N----- Site 926
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. RELVLMK--- C V---N----- Site 926
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. RELQTMR--- L L---D----- Site 926
Penicillium.marneffei.IME2 REVIFLR--- T LP--H----- Site 926
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen RELRLLK--- H M---K----- Site 926
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a REIKIIR--- R L---D----- Site 926
Drosophila.melanogaster.MAK REVKSLK--- K L---S----- Site 926
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH KEVSILE--- R L---Q---AA Site 926
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr KELEFLK--- K L---N---DA Site 926
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de REIKILR--- Q L---V----- Site 926
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep REIGLLK--- E L---S----- Site 926
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d REITLLL--- R L---R----- Site 926
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin RELVLMK--- C V---N----- Site 926
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a RELVLLK--- C V---N----- Site 926
Homo.sapiens.CLK1..Dual.specificity.protein.kinase SEIQVLE--- H L---N---TT Site 926
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis AELQCLT--- V A---G---G- Site 926
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 YEAKLYR--- I L---S---G- Site 926
Candida.parapsilosis.IME2 KEIKFIS--- S VP--S----- Site 926
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p REMMLCR--- E I---Q----- Site 926
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen RELQIMR--- K L---D----- Site 926
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. RELVLLK--- C V---N----- Site 926
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki REIKILE--- N L---R---G- Site 926
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U SEIQVLE--- H L---N---NM Site 926
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a REIKIIR--- R L---D----- Site 926
Species Residue at Site 1734
in 'msaprobs'
muscle

The residue for every species at site 1734 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d REVSLLK--- D L---K----- Site 926
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. REIKILE--- N L---R---G- Site 926
Yarrowia.lipolytica.SSN3..Serine.threonine.protein REVALCA--- E L---D----- Site 926
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. RELTLLK--- H M---N----- Site 926
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos IELRLLE--- L M---N---QH Site 926
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE REIKILE--- N L---R---G- Site 926
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH RELQIMR--- Q LVKDG----- Site 926
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD RELQIMK--- M L---N----- Site 926
Candida.orthopsilosis.IME2 KEIKFIS--- S VP--S----- Site 926
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str REFILMN--- L V---N----- Site 926
Debaryomyces.hansenii.IME2 KEVKFIL--- R IP--S----- Site 926
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati RELQIMK--- L V---D----- Site 926
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin REMSLCR--- E L---D----- Site 926
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE REISCIK--- D L---Q----- Site 926
Caenorhabditis.briggsae.CDK1 REISLLK--- E L---Q----- Site 926
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO REIKILE--- N L---R---G- Site 926
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de REIKALQ--- E I---E---D- Site 926
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos EEIRILE--- H L---K---KQ Site 926
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. REVAVLR--- H LETFE----- Site 926
Monosiga.brevicollis.CDK1 REISILK--- E L---Q----- Site 926
Saccharomyces.cerevisiae.SKY1 DEIKLLQ--- R V---N---DA Site 926
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP RELKLLK--- H F---N----- Site 926
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U REIKMLK--- Q L---R----- Site 926
Drosophila.melanogaster.GSK3..Protein.kinase.shagg RELQIMR--- K L---E----- Site 926
Species Residue at Site 1734
in 'msaprobs'
muscle

The residue for every species at site 1734 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas YESKLYK--- I L---G---G- Site 926
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. REITLLQ--- E FG--D----- Site 926
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d REIKLLK--- Q L---R----- Site 926
Dictyostelium.discoideum.CDK10..Probable.cyclin.de REIQILK--- E I---K----- Site 926
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d RELKMLR--- T L---K----- Site 926
Ajellomyces.capsulatus.CDK1 REISLLK--- E M---H----- Site 926
Dictystelium.discoideum.MAPK3..Extracellular.signa REIHLLR--- H F---K----- Site 926
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep REVAVLR--- H LETFE----- Site 926
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep REITLLL--- R L---R----- Site 926
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac RELVLMK--- C V---N----- Site 926
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. RELLLLK--- H M---H----- Site 926
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO REISLLK--- Q LNASN----- Site 926
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri RELKMLC--- F F---K----- Site 926
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha RELVLMK--- C V---N----- Site 926
Saccharomyces.cerevisiae.CDK1 REISLLK--- E L---K----- Site 926
Lodderomyces.elongisporus.IME2 KEVKFIL--- S VP--S----- Site 926
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen RELRLLK--- H M---R----- Site 926
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un LEINVLE--- K I---N---EK Site 926
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar RELKMLR--- T L---K----- Site 926
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. RELEIMK--- L I---S----- Site 926
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D REVIFLR--- A FR--C----- Site 926
Homo.sapiens.CLK4..Dual.specificity.protein.kinase SEIQVLE--- H L---N---ST Site 926
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U IEVSILA--- R L---S---TE Site 926
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d REIRMLK--- Q L---K----- Site 926
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen RELQIMR--- K L---D----- Site 926
Species Residue at Site 1734
in 'msaprobs'
muscle

The residue for every species at site 1734 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 REISLLK--- E L---Q----- Site 926
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep REVALLR--- R LEAFE----- Site 926
Cryptococcus.neoformans.SSN3..Serine.threonine.pro REIMLNR--- E L---H----- Site 926
Salmo.salar.CDK1 REISLLK--- E L---S----- Site 926
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d REIKLLQ--- E L---S----- Site 926
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d REIKALQ--- E M---E---D- Site 926
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi NEIAYLN--- K L---Q---Q- Site 926
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen RELQIMR--- K L---D----- Site 926
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable EELMPLL--- K L---R----- Site 926
Aspergillus.fumigatus.IME2 REVIFLR--- T LP--A----- Site 926
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan REIALLR--- E L---K----- Site 926
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha LEINVLE--- K I---S---EK Site 926
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha RELTLLK--- Q M---Q----- Site 926
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S REIKMLS--- S F---R----- Site 926
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma IEVSILA--- R L---S---TE Site 926
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina REIQILL--- R F---R----- Site 926
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d REVSLLK--- D L---K----- Site 926
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. REITLLL--- R L---R----- Site 926
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de REIRMLK--- Q L---K----- Site 926
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S REFKLMK--- L V---N----- Site 926
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. RELRLLK--- H M---K----- Site 926
Candida.glabrata.IME2 REVKFIL--- S MT--A----- Site 926
Homo.sapiens.MAK..Serine.threonine.protein.kinase. REVKSLK--- K L---N----- Site 926
Schizosaccharomyces.pombe.IME2 REVHSLL--- R LS--E----- Site 926
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P RELKLLK--- H F---N----- Site 926
Species Residue at Site 1734
in 'msaprobs'
muscle

The residue for every species at site 1734 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl REICLLK--- E L---K----- Site 926
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom NELKLLR--- C V---R---GL Site 926
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. YESKLYK--- I L---Q---G- Site 926
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d REVSLLK--- D L---K----- Site 926
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d REIRMLK--- Q L---K----- Site 926
Branchiostoma.floridae.CDK1 REISLLK--- E L---N----- Site 926
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara LEINVLE--- K I---N---EK Site 926
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH RELQIMR--- I M---K----- Site 926
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD RELRALR--- Q L---R----- Site 926
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR RELQIMR--- K L---N----- Site 926
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. REITLLL--- Q L---Q----- Site 926
Homo.sapiens.ICK..Serine.threonine.protein.kinase. REVKSLK--- K L---N----- Site 926
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci LEINVLK--- K I---K---EK Site 926
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos IEVRLLE--- L M---N---KH Site 926
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep REISLLK--- E L---N----- Site 926
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act RELKILK--- H F---K----- Site 926
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. RELRLLK--- H M---K----- Site 926
Lachancea.thermotolerans.SKY1 DEIKLLR--- Q V---S---AP Site 926
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a REIKIIR--- R L---D----- Site 926
Dictyostelium.discoideum.CDK1 REISLLK--- E V---P----- Site 926
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. RELRLLK--- H M---R----- Site 926
Xenopus.tropicalis.IME2 REISLLK--- E L---N----- Site 926
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U IEVSILS--- R L---S---SE Site 926
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. REIKILE--- N L---R---G- Site 926
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d REISLLK--- E L---N----- Site 926
Species Residue at Site 1734
in 'msaprobs'
muscle

The residue for every species at site 1734 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara REISLLK--- E L---K----- Site 926
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. REASLLK--- G L---K----- Site 926
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD REIMFLQ--- E LH--G----- Site 926
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos IEVRLLE--- L M---N---KH Site 926
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen RELQIMR--- K L---D----- Site 926
Drosophila.melanogaster.GSK3H..Putative.glycogen.s RELQIMR--- K L---R----- Site 926
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD REISLLF--- S L---H----- Site 926
Encephalitozoon.cuniculi.CDK1 REILLLK--- N L---K----- Site 926
Saccharomyces.kluyveri.IME2 REIKFIL--- A MP--A----- Site 926
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci SEIQVLE--- H L---N---ST Site 926
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a REIKILL--- R F---R----- Site 926
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. REASLLK--- G L---K----- Site 926
Cryptococcus.neoformans.IME2 GELVSLR--- N IP--P----- Site 926
Homo.sapiens.HIPK4..Homeodomain.interacting.protei NELKLLH--- C M---R---GL Site 926
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote DEIRLLK--- S V---R---NS Site 926
Candida.lusitaniae.IME2 NEVKFIL--- S IP--S----- Site 926
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom IEVSILS--- R L---S---SE Site 926
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A REIALLR--- E L---K----- Site 926
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep REIKALQ--- E I---E---D- Site 926
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. REIRMLK--- Q L---K----- Site 926
Gallus.gallus.CDK2 REISLLK--- E L---N----- Site 926
Emericella.nidulans.CDK1 REISLLK--- E M---N----- Site 926
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. REIQALR--- R LN--P----- Site 926
Homo.sapiens.CDK1 REISLLK--- E L---R----- Site 926
Candida.albicans.CDK1 REISLLK--- E M---K----- Site 926
Species Residue at Site 1734
in 'msaprobs'
muscle

The residue for every species at site 1734 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca REIKILE--- N L---R---G- Site 926
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a RELKILK--- H F---K----- Site 926
Mus.musculus.ICK..Serine.threonine.protein.kinase. REVKSLK--- K L---N----- Site 926
Saccharomyces.castelli.IME2 REVKFIL--- A LP--T----- Site 926
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec AEVEVLE--- Q M---N---SL Site 926
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep REIKLLQ--- E L---S----- Site 926
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. REASLLK--- G L---K----- Site 926
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly RELQIMR--- V L---D----- Site 926
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS NELNLLY--- I M---T---G- Site 926
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli REIKLLQ--- E L---S----- Site 926
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho REIKILQ--- L L---K----- Site 926
Homo.sapiens.HIPK2..Homeodomain.interacting.protei IEVSILA--- R L---S---TE Site 926
Acyrthosiphon.pisum.CDK1 REISLLK--- E I---N----- Site 926
Candida.tropicalis.CDK1 KEVKFIL--- S IP--S----- Site 926
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin REIALLR--- E L---K----- Site 926
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G RELQIMR--- R L---D----- Site 926
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR REIKILE--- N L---R---G- Site 926
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de REVSLLK--- D L---K----- Site 926
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 REIKILQ--- N L---C---G- Site 926
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d REVSLLK--- D L---K----- Site 926
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA RELILLK--- Q M---Q----- Site 926
Candida.albicans.SSN3..Serine.threonine.protein.ki REMSLCR--- E L---N----- Site 926
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF REIQALR--- R LS--P----- Site 926
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA RELQIMR--- R L---D----- Site 926
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara RELRLLK--- H M---K----- Site 926
Species Residue at Site 1734
in 'msaprobs'
muscle

The residue for every species at site 1734 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de REIKILK--- S I---K----- Site 926
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei REIKILE--- N L---R---G- Site 926
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U IEMGILA--- R L---S---NE Site 926
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d REINTIL--- K A---Q----- Site 926
Candida.dubliniensis.IME2 KEVKFIL--- S VP--S----- Site 926
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a RELVLLK--- C V---N----- Site 926
Aspergillus.niger.IME2 REVIFLR--- S LP--P----- Site 926
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge RELRLLK--- H M---K----- Site 926
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d REIKFLK--- Q F---H----- Site 926
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. REASLLK--- G L---K----- Site 926
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein REIKILE--- N L---R---G- Site 926
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty IEIHLLE--- L T---N---AH Site 926
Schizosaccharomyces.japonicus.IME2 REVRSLA--- K IP--R----- Site 926
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. RELKLMS--- L V---N----- Site 926
Gallus.gallus.CDK1 REISLLK--- E L---H----- Site 926
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep REICLLK--- E L---K----- Site 926
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P RELQIMR--- I V---R----- Site 926
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE REIAVMK--- R LTRQA----- Site 926
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. RELQIMR--- K L---N----- Site 926
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. RELRLLK--- H M---R----- Site 926
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ RELKILT--- N L---T---G- Site 926
Kluyveromyces.waltii.IME2 REVKFIL--- S MP--A----- Site 926
Debaryomyces.hansenii.SKY1 DEIKLLD--- K I---T---TS Site 926
Saccharomyces.cerevisiae.IME2 REIKFIL--- A IP--A----- Site 926
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1734
in 'msaprobs'
muscle

The residue for every species at site 1734 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un REVAVLR--- H LETFE----- Site 926
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein REVKILE--- N L---R---G- Site 926
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a REIKIIR--- R L---D----- Site 926
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep REVAVLR--- H LETFE----- Site 926
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST RELETMK--- M L---C----- Site 926
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk RELRLLK--- H M---Q----- Site 926
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de REIKFLK--- Q F---R----- Site 926
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act RELVLMK--- C V---N----- Site 926
Candida.albicans.IME2 KEVKFIL--- S VP--S----- Site 926
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d REVTLLK--- R LEHFD----- Site 926
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k REIKVLM--- E L---K----- Site 926
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. RELRLLK--- H M---K----- Site 926
Kluyveromyces.lactis.IME2 REIKFIL--- Q IP--A----- Site 926
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina RELKILK--- H F---K----- Site 926
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. RELVLMK--- C V---N----- Site 926
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. RELRLLK--- H L---K----- Site 926
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 YEAKLYR--- I L---S---G- Site 926
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. RELRLLK--- H L---K----- Site 926
Amphimedon.queenslandica.CDK1 REISILK--- E L---D----- Site 926
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d REIRMLK--- Q L---K----- Site 926
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U REISLLK--- E L---K----- Site 926
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME REINTLL--- K G---Q----- Site 926
Neurospora.crassa.IME2 REVVFLR--- T LP--A----- Site 926
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME REICLLK--- E L---K----- Site 926
Dictyostelium.discoideum.DYRK2..Probable.serine.th TEIKILE--- Y L---K---TN Site 926
Species Residue at Site 1734
in 'msaprobs'
muscle

The residue for every species at site 1734 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep REVALLR--- R LEAFE----- Site 926
Hydra.magnipapillata.CDK1 REIALLR--- E L---T----- Site 926
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar REITLLL--- E L---Q----- Site 926
Ashbya.gossypii.IME2 REIKFIL--- Q IP--A----- Site 926
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi NEIAFLN--- K L---Q---Q- Site 926
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos EEIRILE--- H L---K---KQ Site 926
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p RELEIMK--- M L---S----- Site 926
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace REIMFLQ--- E FG--D----- Site 926
Schizosaccharomyces.pombe.b.IME2 RESLALR--- K IS--K----- Site 926
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a REIKILL--- R F---R----- Site 926
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom IEVSILA--- R L---S---TE Site 926
Schizosaccharomyces.pombe.CDK1 REISLLK--- E V---N----- Site 926
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch LEINVLE--- K I---N---EK Site 926
Saccoglossus.kowalevskii.CDK1 REISLLK--- E L---N----- Site 926
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas IESKIYK--- M M---Q---G- Site 926
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac RELVLMK--- C V---N----- Site 926
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep REISLLK--- E L---K----- Site 926
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable EELMPLL--- K L---Q----- Site 926
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep REISLLK--- E L---K----- Site 926
Yarrowia.lipolytica.IME2 REVEFIR--- E VR--P----- Site 926
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil REMALCR--- E L---H----- Site 926
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli REISLLK--- E L---N----- Site 926
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K NELKLLE--- L L---S---N- Site 926
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly RELQIMR--- I V---R----- Site 926
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk RELQIMR--- I M---K----- Site 926
Species Residue at Site 1734
in 'msaprobs'
muscle

The residue for every species at site 1734 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro IEIHLLE--- L T---N---AH Site 926
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo RELKMLC--- F F---K----- Site 926
Scheffersomyces.stipitis.SKY1 DEIKLLD--- K V---T---TS Site 926
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep REICLLK--- E L---K----- Site 926

Generated by PhyloBot at 16:45, October 23rd 2019
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