cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 1729 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1729 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1729 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1729 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1729
in 'msaprobs'
muscle

The residue for every species at site 1729 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---RLREVHS L L---HLS--E Site 924
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---AEDEIKI L N---AI---S Site 924
Danio.rerio.CDK1 ---AIREISL L K---EL---N Site 924
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---TLREIKL L R---HM---D Site 924
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---ALREICL L K---EL---K Site 924
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---ALREICL L R---EL---R Site 924
Candida.guilliermondii.IME2 ---RVKEVQF I Q---AMP--A Site 924
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---LHYESKL Y M---LL---Q Site 924
Chlamydomonas.reinhardtii.LF4 ---NLREIQA L R---RLS--P Site 924
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---KNRELQI M R---AI---S Site 924
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---LLYEAKL Y R---IL---S Site 924
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---LKDEYRT Y K---IL---A Site 921
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---ACREIAL L R---EL---K Site 924
Schizosaccharomyces.octosporus.b.IME2 ---------- - R---QIS--K  
Candida.albicans.MAPK3..Extracellular.signal.regul ---TLRELKL L K---HF---N Site 924
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---IRREIKI L Q---NL---C Site 924
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---LLYESKI Y R---YL---A Site 924
Suberites.domuncula.JNK..Stress.activated.protein. ---AFRELRL M K---MV---D Site 924
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---ARLEINV L K---KI---K Site 924
Aedes.aegypti.CDK1 ---AIREISL L K---EL---K Site 924
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---AQSEIQV L E---HL---N Site 924
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---ARLEINV L E---KI---N Site 924
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---ALMELKI L E---AL---R Site 924
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---GQIEVSI L S---RL---S Site 924
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---ALREVRM L K---QL---K Site 924
Species Residue at Site 1729
in 'msaprobs'
muscle

The residue for every species at site 1729 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---TIREILL L K---NL---K Site 924
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---IKREVKI L E---NL---R Site 924
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---TLREITI L T---RF---K Site 924
Strongylocentrotus.purpuratus.CDK1 ---AIREIAL L K---EL---D Site 924
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---LLYEAKL Y N---AL---Q Site 924
Drosophila.melanogaster.CDK1 ---AIREISL L K---EL---K Site 924
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---LYYEAKL Y K---IF---D Site 924
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---LLFESKL Y K---IF---Q Site 924
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---ALHEIEF L S---AA---A Site 924
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---AIREVSL L K---NL---K Site 924
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---AIREASL L R---GL---K Site 924
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---AYRELVL M K---CV---N Site 924
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---AMREIKL L K---QL---R Site 924
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---AYRELVL M K---CV---N Site 924
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---AYRELLL L K---HM---Q Site 924
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---VFRELKM L C---FF---K Site 924
Bombus.terrestris.CDK1 ---AIREISL L R---EL---T Site 924
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---ALDEIRL L K---SV---R Site 924
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---AVREIKL L K---QL---R Site 924
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---AYRELVL M K---CV---N Site 924
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---AIREIKI L R---QL---I Site 924
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---SLREIQA L R---RLN--P Site 924
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---KNRELQI M QHLARL---R Site 924
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---RNRELQI M QDLAVL---H Site 924
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---LLYEAKL Y R---IL---S Site 924
Species Residue at Site 1729
in 'msaprobs'
muscle

The residue for every species at site 1729 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---LLYESKL Y R---IL---Q Site 924
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---GQIEVSI L S---RL---S Site 924
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---IRREIKI L Q---NL---C Site 924
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---VFRELKM L C---FF---K Site 924
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---ALREIRM L K---QL---K Site 924
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---GQIEVSI L A---RL---S Site 924
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---SLREINT I L---KA---Q Site 924
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---TLRELKM L R---TL---K Site 924
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---ARLEINV L E---KI---N Site 924
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---SLREINT I L---KA---Q Site 924
Naegleria.gruberi.LF4 ---RLREIQA L K---ILS--P Site 924
Saccharomyces.bayanus.IME2 ---RVREIKF I L---AIP--A Site 924
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---IKREVKI L E---NL---R Site 924
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---AYRELRL L K---HM---K Site 924
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---AIREIKI L Q---EL---K Site 924
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---ALIEIRL L E---LM---N Site 924
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---AQIELRL L E---LM---N Site 924
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---AAEEIRI L E---HL---R Site 924
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---TLRELKM L R---TL---K Site 924
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---TFREIML L K---EFG--G Site 924
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---YKNEIEH L N---HL---Q Site 924
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---ALVELKI L E---AL---R Site 924
Aspergillus.nidulans.IME2 ---ELREVIF L R---TLP--P Site 924
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---IAAELQC L T---VA---G Site 924
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---VFREIKM L S---SF---R Site 924
Species Residue at Site 1729
in 'msaprobs'
muscle

The residue for every species at site 1729 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---NLREVKS L K---KL---N Site 924
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---AIREISL L K---EL---N Site 924
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---AYRELVL M K---CV---N Site 924
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---KNRELQT M R---LL---D Site 924
Penicillium.marneffei.IME2 ---ELREVIF L R---TLP--H Site 924
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---TYRELRL L K---HM---K Site 924
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---ALREIKI I R---RL---D Site 924
Drosophila.melanogaster.MAK ---NLREVKS L K---KL---S Site 924
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---GLKEVSI L E---RL---Q Site 924
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---GLKELEF L K---KL---N Site 924
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---AIREIKI L R---QL---V Site 924
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---AYREIGL L K---EL---S Site 924
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---SLREITL L L---RL---R Site 924
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---AYRELVL M K---CV---N Site 924
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---AYRELVL L K---CV---N Site 924
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---ARSEIQV L E---HL---N Site 924
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---IAAELQC L T---VA---G Site 924
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---LLYEAKL Y R---IL---S Site 924
Candida.parapsilosis.IME2 ---KVKEIKF I S---SVP--S Site 924
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---AIREMML C R---EI---Q Site 924
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---KNRELQI M R---KL---D Site 924
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---AYRELVL L K---CV---N Site 924
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---IKREIKI L E---NL---R Site 924
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---ARSEIQV L E---HL---N Site 924
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---ALREIKI I R---RL---D Site 924
Species Residue at Site 1729
in 'msaprobs'
muscle

The residue for every species at site 1729 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---AIREVSL L K---DL---K Site 924
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---IKREIKI L E---NL---R Site 924
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---ACREVAL C A---EL---D Site 924
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---AFRELTL L K---HM---N Site 924
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---AQIELRL L E---LM---N Site 924
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---IKREIKI L E---NL---R Site 924
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---KNRELQI M R---QLVKDG Site 924
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---KNRELQI M K---ML---N Site 924
Candida.orthopsilosis.IME2 ---KVKEIKF I S---SVP--S Site 924
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---AYREFIL M N---LV---N Site 924
Debaryomyces.hansenii.IME2 ---TVKEVKF I L---RIP--S Site 924
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---KNRELQI M K---LV---D Site 924
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---ACREMSL C R---EL---D Site 924
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---CLREISC I K---DL---Q Site 924
Caenorhabditis.briggsae.CDK1 ---AVREISL L K---EL---Q Site 924
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---IKREIKI L E---NL---R Site 924
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---ALREIKA L Q---EI---E Site 924
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---AAEEIRI L E---HL---K Site 924
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---TIREVAV L R---HLETFE Site 924
Monosiga.brevicollis.CDK1 ---AIREISI L K---EL---Q Site 924
Saccharomyces.cerevisiae.SKY1 ---AEDEIKL L Q---RV---N Site 924
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---TLRELKL L K---HF---N Site 924
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---AAREIKM L K---QL---R Site 924
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---KNRELQI M R---KL---E Site 924
Species Residue at Site 1729
in 'msaprobs'
muscle

The residue for every species at site 1729 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---LLYESKL Y K---IL---G Site 924
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---TFREITL L Q---EFG--D Site 924
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---AMREIKL L K---QL---R Site 924
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---SLREIQI L K---EI---K Site 924
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---TLRELKM L R---TL---K Site 924
Ajellomyces.capsulatus.CDK1 ---AIREISL L K---EM---H Site 924
Dictystelium.discoideum.MAPK3..Extracellular.signa ---TLREIHL L R---HF---K Site 924
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---TIREVAV L R---HLETFE Site 924
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---SLREITL L L---RL---R Site 924
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---AYRELVL M K---CV---N Site 924
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---AYRELLL L K---HM---H Site 924
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---TLREISL L K---QLNASN Site 924
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---VFRELKM L C---FF---K Site 924
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---AYRELVL M K---CV---N Site 924
Saccharomyces.cerevisiae.CDK1 ---AIREISL L K---EL---K Site 924
Lodderomyces.elongisporus.IME2 ---KVKEVKF I L---SVP--S Site 924
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---TYRELRL L K---HM---R Site 924
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---ARLEINV L E---KI---N Site 924
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---TLRELKM L R---TL---K Site 924
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---KNRELEI M K---LI---S Site 924
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---TYREVIF L R---AFR--C Site 924
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---ARSEIQV L E---HL---N Site 924
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---GQIEVSI L A---RL---S Site 924
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---ALREIRM L K---QL---K Site 924
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---KNRELQI M R---KL---D Site 924
Species Residue at Site 1729
in 'msaprobs'
muscle

The residue for every species at site 1729 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---AVREISL L K---EL---Q Site 924
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---TVREVAL L R---RLEAFE Site 924
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---GAREIML N R---EL---H Site 924
Salmo.salar.CDK1 ---AIREISL L K---EL---S Site 924
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---ALREIKL L Q---EL---S Site 924
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---ALREIKA L Q---EM---E Site 924
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---YRNEIAY L N---KL---Q Site 924
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---KNRELQI M R---KL---D Site 924
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---ALEELMP L L---KL---R Site 924
Aspergillus.fumigatus.IME2 ---ELREVIF L R---TLP--A Site 924
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---ACREIAL L R---EL---K Site 924
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---AKLEINV L E---KI---S Site 924
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---AYRELTL L K---QM---Q Site 924
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---VFREIKM L S---SF---R Site 924
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---GQIEVSI L A---RL---S Site 924
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---TLREIQI L L---RF---R Site 924
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---AIREVSL L K---DL---K Site 924
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---SLREITL L L---RL---R Site 924
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---ALREIRM L K---QL---K Site 924
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---AYREFKL M K---LV---N Site 924
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---AYRELRL L K---HM---K Site 924
Candida.glabrata.IME2 ---RVREVKF I L---SMT--A Site 924
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---NLREVKS L K---KL---N Site 924
Schizosaccharomyces.pombe.IME2 ---RLREVHS L L---RLS--E Site 924
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---TLRELKL L K---HF---N Site 924
Species Residue at Site 1729
in 'msaprobs'
muscle

The residue for every species at site 1729 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---ALREICL L K---EL---K Site 924
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---IKNELKL L R---CV---R Site 924
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---LLYESKL Y K---IL---Q Site 924
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---AIREVSL L K---DL---K Site 924
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---ALREIRM L K---QL---K Site 924
Branchiostoma.floridae.CDK1 ---AIREISL L K---EL---N Site 924
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---ARLEINV L E---KI---N Site 924
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---KNRELQI M R---IM---K Site 924
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---ARRELRA L R---QL---R Site 924
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---KNRELQI M R---KL---N Site 924
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---SLREITL L L---QL---Q Site 924
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---NLREVKS L K---KL---N Site 924
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---ARLEINV L K---KI---K Site 924
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---AQIEVRL L E---LM---N Site 924
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---AIREISL L K---EL---N Site 924
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---TLRELKI L K---HF---K Site 924
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---TYRELRL L K---HM---K Site 924
Lachancea.thermotolerans.SKY1 ---ALDEIKL L R---QV---S Site 924
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---ALREIKI I R---RL---D Site 924
Dictyostelium.discoideum.CDK1 ---ALREISL L K---EV---P Site 924
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---AYRELRL L K---HM---R Site 924
Xenopus.tropicalis.IME2 ---AIREISL L K---EL---N Site 924
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---GQIEVSI L S---RL---S Site 924
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---IKREIKI L E---NL---R Site 924
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---AIREISL L K---EL---N Site 924
Species Residue at Site 1729
in 'msaprobs'
muscle

The residue for every species at site 1729 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---AIREISL L K---EL---K Site 924
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---AIREASL L K---GL---K Site 924
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---TFREIMF L Q---ELH--G Site 924
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---AQIEVRL L E---LM---N Site 924
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---KNRELQI M R---KL---D Site 924
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---KNRELQI M R---KL---R Site 924
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---SIREISL L F---SL---H Site 924
Encephalitozoon.cuniculi.CDK1 ---TIREILL L K---NL---K Site 924
Saccharomyces.kluyveri.IME2 ---RVREIKF I L---AMP--A Site 924
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---ARSEIQV L E---HL---N Site 924
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---TLREIKI L L---RF---R Site 924
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---AIREASL L K---GL---K Site 924
Cryptococcus.neoformans.IME2 ---SLGELVS L R---NIP--P Site 924
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---IKNELKL L H---CM---R Site 924
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---ALDEIRL L K---SV---R Site 924
Candida.lusitaniae.IME2 ---RVNEVKF I L---SIP--S Site 924
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---GQIEVSI L S---RL---S Site 924
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---ACREIAL L R---EL---K Site 924
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---ALREIKA L Q---EI---E Site 924
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---ALREIRM L K---QL---K Site 924
Gallus.gallus.CDK2 ---AIREISL L K---EL---N Site 924
Emericella.nidulans.CDK1 ---AIREISL L K---EM---N Site 924
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---NLREIQA L R---RLN--P Site 924
Homo.sapiens.CDK1 ---AIREISL L K---EL---R Site 924
Candida.albicans.CDK1 ---AIREISL L K---EM---K Site 924
Species Residue at Site 1729
in 'msaprobs'
muscle

The residue for every species at site 1729 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---IKREIKI L E---NL---R Site 924
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---TLRELKI L K---HF---K Site 924
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---NLREVKS L K---KL---N Site 924
Saccharomyces.castelli.IME2 ---RVREVKF I L---ALP--T Site 924
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---AMAEVEV L E---QM---N Site 924
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---ALREIKL L Q---EL---S Site 924
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---AIREASL L K---GL---K Site 924
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---KNRELQI M R---VL---D Site 924
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---IYNELNL L Y---IM---T Site 924
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---ALREIKL L Q---EL---S Site 924
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---ALREIKI L Q---LL---K Site 924
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---GQIEVSI L A---RL---S Site 924
Acyrthosiphon.pisum.CDK1 ---AMREISL L K---EI---N Site 924
Candida.tropicalis.CDK1 ---NVKEVKF I L---SIP--S Site 924
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---ACREIAL L R---EL---K Site 924
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---KNRELQI M R---RL---D Site 924
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---IKREIKI L E---NL---R Site 924
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---AIREVSL L K---DL---K Site 924
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---IRREIKI L Q---NL---C Site 924
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---AIREVSL L K---DL---K Site 924
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---AYRELIL L K---QM---Q Site 924
Candida.albicans.SSN3..Serine.threonine.protein.ki ---AIREMSL C R---EL---N Site 924
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---NLREIQA L R---RLS--P Site 924
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---KNRELQI M R---RL---D Site 924
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---AYRELRL L K---HM---K Site 924
Species Residue at Site 1729
in 'msaprobs'
muscle

The residue for every species at site 1729 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---AIREIKI L K---SI---K Site 924
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---IKREIKI L E---NL---R Site 924
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---GQIEMGI L A---RL---S Site 924
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---SLREINT I L---KA---Q Site 924
Candida.dubliniensis.IME2 ---NVKEVKF I L---SVP--S Site 924
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---AYRELVL L K---CV---N Site 924
Aspergillus.niger.IME2 ---ELREVIF L R---SLP--P Site 924
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---TYRELRL L K---HM---K Site 924
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---AMREIKF L K---QF---H Site 924
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---AIREASL L K---GL---K Site 924
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---IKREIKI L E---NL---R Site 924
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---AQIEIHL L E---LT---N Site 924
Schizosaccharomyces.japonicus.IME2 ---RLREVRS L A---KIP--R Site 924
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---AYRELKL M S---LV---N Site 924
Gallus.gallus.CDK1 ---AIREISL L K---EL---H Site 924
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---ALREICL L K---EL---K Site 924
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P KPRQNRELQI M R---IV---R Site 924
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---VIREIAV M K---RLTRQA Site 924
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---KNRELQI M R---KL---N Site 924
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---AYRELRL L K---HM---R Site 924
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---IYRELKI L T---NL---T Site 924
Kluyveromyces.waltii.IME2 ---RVREVKF I L---SMP--A Site 924
Debaryomyces.hansenii.SKY1 ---AIDEIKL L D---KI---T Site 924
Saccharomyces.cerevisiae.IME2 ---RVREIKF I L---AIP--A Site 924
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1729
in 'msaprobs'
muscle

The residue for every species at site 1729 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---TIREVAV L R---HLETFE Site 924
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---IKREVKI L E---NL---R Site 924
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---ALREIKI I R---RL---D Site 924
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---TIREVAV L R---HLETFE Site 924
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---KNRELET M K---ML---C Site 924
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---AYRELRL L K---HM---Q Site 924
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---ATREIKF L K---QF---R Site 924
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---AYRELVL M K---CV---N Site 924
Candida.albicans.IME2 ---NVKEVKF I L---SVP--S Site 924
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---TVREVTL L K---RLEHFD Site 924
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---SVREIKV L M---EL---K Site 924
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---TYRELRL L K---HM---K Site 924
Kluyveromyces.lactis.IME2 ---RVREIKF I L---QIP--A Site 924
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---TLRELKI L K---HF---K Site 924
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---AYRELVL M K---CV---N Site 924
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---TYRELRL L K---HL---K Site 924
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---LLYEAKL Y R---IL---S Site 924
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---TYRELRL L K---HL---K Site 924
Amphimedon.queenslandica.CDK1 ---AIREISI L K---EL---D Site 924
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---ALREIRM L K---QL---K Site 924
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---AIREISL L K---EL---K Site 924
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---SLREINT L L---KG---Q Site 924
Neurospora.crassa.IME2 ---ELREVVF L R---TLP--A Site 924
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---ALREICL L K---EL---K Site 924
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---ALTEIKI L E---YL---K Site 924
Species Residue at Site 1729
in 'msaprobs'
muscle

The residue for every species at site 1729 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---TVREVAL L R---RLEAFE Site 924
Hydra.magnipapillata.CDK1 ---AIREIAL L R---EL---T Site 924
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---SLREITL L L---EL---Q Site 924
Ashbya.gossypii.IME2 ---RVREIKF I L---QIP--A Site 924
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---YRNEIAF L N---KL---Q Site 924
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---AAEEIRI L E---HL---K Site 924
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---KNRELEI M K---ML---S Site 924
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---TFREIMF L Q---EFG--D Site 924
Schizosaccharomyces.pombe.b.IME2 ---KLRESLA L R---KIS--K Site 924
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---TLREIKI L L---RF---R Site 924
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---GQIEVSI L A---RL---S Site 924
Schizosaccharomyces.pombe.CDK1 ---AIREISL L K---EV---N Site 924
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---ARLEINV L E---KI---N Site 924
Saccoglossus.kowalevskii.CDK1 ---AIREISL L K---EL---N Site 924
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---LHIESKI Y K---MM---Q Site 924
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---AYRELVL M K---CV---N Site 924
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---AVREISL L K---EL---K Site 924
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---ALEELMP L L---KL---Q Site 924
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---AIREISL L K---EL---K Site 924
Yarrowia.lipolytica.IME2 ---LLREVEF I R---EVR--P Site 924
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---ACREMAL C R---EL---H Site 924
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---AIREISL L K---EL---N Site 924
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---IENELKL L E---LL---S Site 924
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---KNRELQI M R---IV---R Site 924
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---KNRELQI M R---IM---K Site 924
Species Residue at Site 1729
in 'msaprobs'
muscle

The residue for every species at site 1729 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---AQIEIHL L E---LT---N Site 924
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---VFRELKM L C---FF---K Site 924
Scheffersomyces.stipitis.SKY1 ---AVDEIKL L D---KV---T Site 924
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---ALREICL L K---EL---K Site 924

Generated by PhyloBot at 02:21, October 16th 2019
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