cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1653 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1653 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1653 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1653 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1653
in 'msaprobs'
muscle

The residue for every species at site 1653 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 KVVAIKSMKK K L--------- Site 889
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD KQVALKIVRS A R--------- Site 892
Danio.rerio.CDK1 ETVALKKIRL D T--------- Site 889
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge EHVAVKKIAN A F--------- Site 889
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d EIVALKRVRL D D--------- Site 889
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK SEVALKRIKL D D--------- Site 889
Candida.guilliermondii.IME2 PLVAIKTMNA R L--------- Site 889
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ EEVAVKLENV K T--------- Site 892
Chlamydomonas.reinhardtii.LF4 KYVAIKCMKN H F--------- Site 889
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g GFIAVKRVLQ D K--------- Site 892
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 EEVAIKMESA H A--------- Site 892
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 LPVAIKFEPR K T--------- Site 889
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho KDYALKQIEG T ---------- Site 893
Schizosaccharomyces.octosporus.b.IME2 DQVVL----- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul QKVAIKKIEP - F---------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. EKCIIKILKP V K--------- Site 894
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 EEVALKFETA K T--------- Site 892
Suberites.domuncula.JNK..Stress.activated.protein. EKIAIKKLVK P F--------- Site 889
Homo.sapiens.CLK3..Dual.specificity.protein.kinase SQVALKIIRN V G--------- Site 892
Aedes.aegypti.CDK1 QIVAMKKIRL E S--------- Site 889
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci RRVAVKIVKN V D--------- Site 892
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ARVALKIIKN V E--------- Site 892
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ELVALKIIRN K K--------- Site 892
Homo.sapiens.HIPK1..Homeodomain.interacting.protei EIVAIKILKN H P--------- Site 892
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar QIVAIKKFLE S E--------- Site 889
Species Residue at Site 1653
in 'msaprobs'
muscle

The residue for every species at site 1653 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 KIVALKKIRL E N--------- Site 889
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ERVVVKILKP V K--------- Site 894
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM QRVAIKKISP F ---------- Site 890
Strongylocentrotus.purpuratus.CDK1 KTVALKKIRL D T--------- Site 889
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca EIVAVKIESS K T--------- Site 892
Drosophila.melanogaster.CDK1 QIVAMKKIRL E S--------- Site 889
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 EECAIKLEPA K T--------- Site 892
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. EEVAIKLEPA K A--------- Site 892
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH TYVALKIQKS A Q--------- Site 892
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d NLVALKEIRL E H--------- Site 890
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. QVIALKEIRL Q Q--------- Site 890
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET RNVAIKKLSR P F--------- Site 889
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 RIVAIKKFLE S D--------- Site 889
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U RNVAIKKLSR P F--------- Site 889
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. EKVAIKKLSR P F--------- Site 889
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo KRVALKKMPN V F--------- Site 889
Bombus.terrestris.CDK1 KLVALKKIRL E T--------- Site 889
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 KFVAMKVVKS A E--------- Site 892
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar QVVAVKKFLE S E--------- Site 889
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. RHVAIKKLSR P F--------- Site 889
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ELVALKKVRL D N--------- Site 889
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. NYYACKQMKQ H F--------- Site 889
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. SLVAIKKVIQ D P--------- Site 892
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G MSVAIKKVIQ D P--------- Site 892
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 EEVAIKMESA H A--------- Site 892
Species Residue at Site 1653
in 'msaprobs'
muscle

The residue for every species at site 1653 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 EELAIKLENV K T--------- Site 892
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO EIVAIKILKN H P--------- Site 892
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C EKCIIKILKP V K--------- Site 894
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl KRVALKKMPN V F--------- Site 889
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 QIVAIKKFLE S E--------- Site 889
Homo.sapiens.HIPK3..Homeodomain.interacting.protei EIVAIKILKN H P--------- Site 892
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O EIVALKRLKM E K--------- Site 889
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ELVAIKKFKD S E--------- Site 889
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci TQVALKIIKN V E--------- Site 892
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O EIVALKRLKM E K--------- Site 889
Naegleria.gruberi.LF4 QRVAIKCMKS K F--------- Site 889
Saccharomyces.bayanus.IME2 GVVAIKTMMT K L--------- Site 889
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ERVVVKILKP V K--------- Site 894
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a AKVAIKKLHR P F--------- Site 889
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QIVAIKKIRK I L--------- Site 885
Dictyostelium.discoideum.DYRK1..Probable.serine.th EYVAIKIIKN K V--------- Site 892
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ELVAIKIIKN K K--------- Site 892
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos QHVALKMVRN E K--------- Site 892
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d EIVAIKKFKD S E--------- Site 889
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a EVVAIKKIFD A F--------- Site 889
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific HVYAVKYVNL E E--------- Site 889
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ELVALKIIRN K K--------- Site 892
Aspergillus.nidulans.IME2 TLVAIKTMKK T F--------- Site 889
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi EKIALKHLIP T S--------- Site 893
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se KRVALKKMPN V F--------- Site 889
Species Residue at Site 1653
in 'msaprobs'
muscle

The residue for every species at site 1653 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ELVAIKRMKR K F--------- Site 889
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep EVVALKKIRL D T--------- Site 889
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. RNVAIKKLSR P F--------- Site 889
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ETVAIKKVLQ D K--------- Site 892
Penicillium.marneffei.IME2 TMVAIKTMKK T F--------- Site 889
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen LRVAVKKLSR P F--------- Site 889
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a RKVAVKKIAL S D--------- Site 891
Drosophila.melanogaster.MAK EKVAIKRMKR K Y--------- Site 889
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH QTFAIKIIRN N E--------- Site 891
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr QEVAVKIIRN N E--------- Site 892
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ELVALKKVRL D N--------- Site 889
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep NKVAVKKFRS T K--------- Site 889
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d EIVALKKVRM D K--------- Site 889
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin RNVAIKKLSR P F--------- Site 889
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a INVAVKKLSR P F--------- Site 889
Homo.sapiens.CLK1..Dual.specificity.protein.kinase RHVAVKIVKN V D--------- Site 892
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis EKIALKHLIP T S--------- Site 893
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 EEVAIKMESA H A--------- Site 892
Candida.parapsilosis.IME2 NLVAIKTMKK K L--------- Site 889
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p RLFAIKKFKA E S--------- Site 882
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ELVAIKKVLQ D K--------- Site 892
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. INVAVKKLSR P F--------- Site 889
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki EKVVVKILKP V K--------- Site 894
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U MHVAVKIVKN V G--------- Site 892
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a RKVAVKKIVL S D--------- Site 891
Species Residue at Site 1653
in 'msaprobs'
muscle

The residue for every species at site 1653 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d NLVALKEIRL E H--------- Site 890
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. EKVVVKILKP V K--------- Site 894
Yarrowia.lipolytica.SSN3..Serine.threonine.protein NQYAIKKFKA D K--------- Site 884
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. EKVAIKKLSR P F--------- Site 889
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ELVAIKIIKN K K--------- Site 892
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE EKVVVKILKP V K--------- Site 893
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH EIVAIKKVLQ D K--------- Site 892
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD EVVAIKKVLQ D Q--------- Site 892
Candida.orthopsilosis.IME2 NLVAIKTMKK K L--------- Site 889
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot TIVAIKKL-- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str KPVAIKKLSR P F--------- Site 889
Debaryomyces.hansenii.IME2 CLVAIKTMKT P L--------- Site 889
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ETVAIKKVLQ D K--------- Site 892
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin PFYAIKKFKT E R--------- Site 883
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE VQCALKMIRT D R--------- Site 889
Caenorhabditis.briggsae.CDK1 AMVAMKKIRL E S--------- Site 889
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO EKCVVKILKP V K--------- Site 894
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de EIVALKKVAL R R--------- Site 889
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos QYVALKMVRN E K--------- Site 892
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. RFVALKRVRV Q T--------- Site 889
Monosiga.brevicollis.CDK1 QIVALKKIRL E S--------- Site 889
Saccharomyces.cerevisiae.SKY1 THVAMKIVRG D K--------- Site 892
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP QKVAIKKIVP - F---------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U QIVAIKKFLD S E--------- Site 889
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ELVAIKKVLQ D R--------- Site 892
Species Residue at Site 1653
in 'msaprobs'
muscle

The residue for every species at site 1653 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas EEFAVKLEST R S--------- Site 892
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. EVVAIKKIFD A F--------- Site 889
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d RIVAIKKFLE S D--------- Site 889
Dictyostelium.discoideum.CDK10..Probable.cyclin.de RIVALKKVKI G Q--------- Site 888
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d EIVAIKKFKD S E--------- Site 889
Ajellomyces.capsulatus.CDK1 RIVALKKIRL E A--------- Site 889
Dictystelium.discoideum.MAPK3..Extracellular.signa EKVAIKKISK A F--------- Site 889
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep RFVALKRVRV Q T--------- Site 889
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep EIVALKKVRM D K--------- Site 889
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac RNVAIKKLSR P F--------- Site 889
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. EKVAIKKLSR P F--------- Site 889
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO NIVALKKVRI S L--------- Site 889
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri KRVALKKMPN V F--------- Site 889
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha RNVAIKKLSR P F--------- Site 889
Saccharomyces.cerevisiae.CDK1 RVVALKKIRL E S--------- Site 889
Lodderomyces.elongisporus.IME2 NLVAIKTMKK K L--------- Site 889
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen FKVAVKKLSR P F--------- Site 889
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ARVALKIIKN V E--------- Site 892
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar EIVAIKKFKD S E--------- Site 889
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. RMLSLRRFYR I R--------- Site 892
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D NTVALKKVFD A F--------- Site 889
Homo.sapiens.CLK4..Dual.specificity.protein.kinase MHVAVKIVKN V G--------- Site 892
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U EIVAIKILKN H P--------- Site 892
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d QIVAIKRFLE T E--------- Site 889
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ELVAIKKVLQ D K--------- Site 892
Species Residue at Site 1653
in 'msaprobs'
muscle

The residue for every species at site 1653 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 AMVAMKKIRL E S--------- Site 889
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep HFVALKSVRV P N--------- Site 886
Cryptococcus.neoformans.SSN3..Serine.threonine.pro DVFAIKKFKP D K--------- Site 884
Salmo.salar.CDK1 ETVALKKIRL D T--------- Site 889
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d RIVAIKKIKL G H--------- Site 886
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d EIVALKKVAL R R--------- Site 889
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi QIYAIKYVNL E E--------- Site 889
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ELVAIKKVLQ D K--------- Site 892
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable VKHVIKQVEC M D--------- Site 891
Aspergillus.fumigatus.IME2 TMVAIKTMKK T F--------- Site 889
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan RDYALKQIEG T ---------- Site 893
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha RQIALKIIKN Q E--------- Site 892
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha EKVAIKKLCR P F--------- Site 889
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S KRVALKKMPN V F--------- Site 889
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma EIVAIKILKN H P--------- Site 892
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina TRVAIKKISP F ---------- Site 890
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d NLVALKEIRL E H--------- Site 890
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. EIVALKKVRM D K--------- Site 889
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de QIVAIKKFVE S E--------- Site 889
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S QNVAIKKLSR P F--------- Site 889
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. SKVAVKKLYR P F--------- Site 889
Candida.glabrata.IME2 GLVAIKTMLT R L--------- Site 889
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ELVAIKRMKR K F--------- Site 889
Schizosaccharomyces.pombe.IME2 EVVAIKSMKK K L--------- Site 889
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P QKVAIKKIEP - F---------  
Species Residue at Site 1653
in 'msaprobs'
muscle

The residue for every species at site 1653 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl EIVALKRVRL D E--------- Site 889
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom EMVAIKILKN D A--------- Site 893
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. EEVAVKLESQ K A--------- Site 892
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d NLVALKEIRL E H--------- Site 890
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d QVVAIKKFVE S E--------- Site 889
Branchiostoma.floridae.CDK1 RMVALKKIRL D T--------- Site 889
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara VRVALKIIKN V E--------- Site 892
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH SKAAIKRVLQ D K--------- Site 892
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD QIVAIKKFLE E D--------- Site 890
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR EMVAIKKVLQ D K--------- Site 892
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ETVALKKVRM D N--------- Site 889
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ELIAIKKMKR K F--------- Site 889
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci SQVALKIIRN V G--------- Site 892
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos EWVAIKIIKN K K--------- Site 892
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep EVVALKKIRL D T--------- Site 889
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act QQVAIKKIPN A F--------- Site 889
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. LRVAVKKLSR P F--------- Site 889
Lachancea.thermotolerans.SKY1 AHVAMKIVRS D K--------- Site 892
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a KRVAIKKIVL T D--------- Site 891
Dictyostelium.discoideum.CDK1 RMVALKKIRL E D--------- Site 891
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. NKVAIKKLYR P F--------- Site 889
Xenopus.tropicalis.IME2 EIVALKKIRL D T--------- Site 889
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U EIVAIKILKN H P--------- Site 892
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. EKVVVKILKP V K--------- Site 894
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d EIVALKKIRL D T--------- Site 889
Species Residue at Site 1653
in 'msaprobs'
muscle

The residue for every species at site 1653 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara QLVALKKIRL D A--------- Site 889
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. QLVALKVISM N A--------- Site 890
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD QTVALKKIFD A F--------- Site 889
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos EWVAIKIIKN K K--------- Site 892
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ELVAIKKVLQ D K--------- Site 892
Drosophila.melanogaster.GSK3H..Putative.glycogen.s EMVAIKKVLQ D R--------- Site 892
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD RIVALKKVRM E K--------- Site 889
Encephalitozoon.cuniculi.CDK1 RVVALKKIRL E N--------- Site 889
Saccharomyces.kluyveri.IME2 GVVAIKTMMT R L--------- Site 889
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci LHVAVKIVKN V G--------- Site 892
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a VRVAIKKISP F ---------- Site 890
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. QLVALKVISM N A--------- Site 890
Cryptococcus.neoformans.IME2 RLVALKRMKR V W--------- Site 889
Homo.sapiens.HIPK4..Homeodomain.interacting.protei EMVAIKILKN D A--------- Site 893
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote KFVAMKVVKS A E--------- Site 892
Candida.lusitaniae.IME2 GLVAVKVMKT Q L--------- Site 889
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom EIVAIKILKN H P--------- Site 892
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A KDYALKQIEG T ---------- Site 893
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ETVALKKVAL R R--------- Site 889
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. QIVAIKKFVE S E--------- Site 889
Gallus.gallus.CDK2 EVVALKKIRL D T--------- Site 889
Emericella.nidulans.CDK1 RIVALKKIRL E A--------- Site 889
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. NYYACKQMKQ R F--------- Site 889
Homo.sapiens.CDK1 QVVAMKKIRL E S--------- Site 889
Candida.albicans.CDK1 RVVALKKIRL E S--------- Site 889
Species Residue at Site 1653
in 'msaprobs'
muscle

The residue for every species at site 1653 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca EKVVVKILKP V K--------- Site 894
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a QQVAIKKIPN A F--------- Site 889
Mus.musculus.ICK..Serine.threonine.protein.kinase. ELIAIKKMKR K F--------- Site 889
Saccharomyces.castelli.IME2 RLVAIKTMLT K L--------- Site 889
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec SRVALKIIKN I D--------- Site 892
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep QIVAIKKIKL G H--------- Site 886
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. KLVALKVIRL Q E--------- Site 890
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly DVVAIKKVLQ D K--------- Site 892
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS NYVALKKIYV T S--------- Site 893
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli TIVAIKKIKV G H--------- Site 886
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho QKVALKKVLM E N--------- Site 889
Homo.sapiens.HIPK2..Homeodomain.interacting.protei EIVAIKILKN H P--------- Site 892
Acyrthosiphon.pisum.CDK1 KFVALKKVRM E S--------- Site 889
Candida.tropicalis.CDK1 NLVAIKTMKK K L--------- Site 889
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin KEYALKQIDG T ---------- Site 893
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G DSVAIKKVLQ D K--------- Site 892
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR EKCVVKILKP V K--------- Site 894
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de NLVALKEIRL E H--------- Site 890
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 EKCIIKILKP V K--------- Site 894
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d NLVALKEIRL E H--------- Site 890
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA EKVAIKKLCR P F--------- Site 889
Candida.albicans.SSN3..Serine.threonine.protein.ki QFFAIKKFKS D NHHHHINNNN Site 872
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF KYVAIKCMKN H F--------- Site 889
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA DLVAIKKVLQ D K--------- Site 892
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara EKVAIKKLHR P F--------- Site 889
Species Residue at Site 1653
in 'msaprobs'
muscle

The residue for every species at site 1653 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de KVYALKRILM H T--------- Site 889
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei EKVVVKILKP V K--------- Site 894
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U EVVAVKILKN H P--------- Site 892
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d EIVALKRLKM E K--------- Site 889
Candida.dubliniensis.IME2 NLVAIKTMKK K L--------- Site 889
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a INVAVKKLSR P F--------- Site 889
Aspergillus.niger.IME2 TMVAIKTMKK T F--------- Site 889
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge LRIAVKKLSR P F--------- Site 889
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d QIVAIKIFYE R P--------- Site 890
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. KLVALKVIRL Q E--------- Site 890
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein EKVVVKILKP V K--------- Site 894
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty EEVAIKIIKN K K--------- Site 892
Schizosaccharomyces.japonicus.IME2 ELFAIKSMKT P L--------- Site 889
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. EQVAIKKLSR P F--------- Site 889
Gallus.gallus.CDK1 QVVAMKKIRL E S--------- Site 889
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep EIVALKRVRL D D--------- Site 889
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P EDAAIKRVLQ D K--------- Site 872
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE KDYALKQIVM S A--------- Site 889
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. EMVAIKKVLQ D K--------- Site 892
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. AKVAIKKLYR P F--------- Site 889
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ QKCVIKVLKP V K--------- Site 893
Kluyveromyces.waltii.IME2 GVLAIKTMMT R L--------- Site 889
Debaryomyces.hansenii.SKY1 CHVAMKIVRS A K--------- Site 892
Saccharomyces.cerevisiae.IME2 GVVAIKTMMT K L--------- Site 889
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1653
in 'msaprobs'
muscle

The residue for every species at site 1653 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un RFVALKRVRV Q T--------- Site 889
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ERVVVKILKP V K--------- Site 894
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a KRVAIKKIVL T D--------- Site 891
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep RFVALKRVRV Q T--------- Site 889
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST QKVAIKKVLQ D R--------- Site 892
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk TKVAIKKLYR P F--------- Site 889
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de RIVAIKIFYE K P--------- Site 890
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act RNVAIKKLSR P F--------- Site 889
Candida.albicans.IME2 NLVAIKTMKK K L--------- Site 889
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d KFVALKNVRV Q T--------- Site 889
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k EIVALKKIKM E R--------- Site 889
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. HRVAVKKLSR P F--------- Site 889
Kluyveromyces.lactis.IME2 GIVAIKTMMN R L--------- Site 889
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina QQVAIKKIPN A F--------- Site 889
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. RNVAIKKLSR P F--------- Site 889
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. QKVAVKKLSR P F--------- Site 889
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 EEVAIKMESA H A--------- Site 892
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. QKVAVKKLSR P F--------- Site 889
Amphimedon.queenslandica.CDK1 RVVALKKIRL D A--------- Site 889
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d QVVAVKKFVE S E--------- Site 889
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U QLVALKKIRL D A--------- Site 889
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME EIVALKRLKM E K--------- Site 889
Neurospora.crassa.IME2 TVIAIKTMKK T F--------- Site 889
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME EIVALKRVRL D E--------- Site 889
Dictyostelium.discoideum.DYRK2..Probable.serine.th EMVALKILRN Q K--------- Site 892
Species Residue at Site 1653
in 'msaprobs'
muscle

The residue for every species at site 1653 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep HFVALKSVRV P N--------- Site 886
Hydra.magnipapillata.CDK1 KVIALKKIRL D T--------- Site 889
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ETVALKKVRM D N--------- Site 889
Ashbya.gossypii.IME2 GLVAIKTMMT R L--------- Site 889
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi QINAIKYVNL E D--------- Site 888
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos QYVALKMVRN E K--------- Site 892
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p EKVAIKKVLQ D K--------- Site 892
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ETVAVKKIFD A F--------- Site 887
Schizosaccharomyces.pombe.b.IME2 ETVAVKKLKN S S--------- Site 888
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a VRVAIKKISP F ---------- Site 890
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom EIVAIKILKN H P--------- Site 892
Schizosaccharomyces.pombe.CDK1 RIVAMKKIRL E D--------- Site 889
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch VSVALKIIKN V E--------- Site 892
Saccoglossus.kowalevskii.CDK1 KMVALKKIRL D T--------- Site 889
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas EEVAIKLECV K T--------- Site 892
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac RNVAIKKLSR P F--------- Site 889
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep QLVALKKIRL D L--------- Site 889
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable TKFLIKQVEC I D--------- Site 891
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep QLVALKKIRL D L--------- Site 889
Yarrowia.lipolytica.IME2 SMVAIKTMKK K L--------- Site 889
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil VFYAIKKFKT E K--------- Site 883
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ETVALKKIRL D T--------- Site 889
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K KHVAIKRIYV T S--------- Site 893
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly EDAAIKRVLQ D K--------- Site 892
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk SKAAIKRVLQ D K--------- Site 892
Species Residue at Site 1653
in 'msaprobs'
muscle

The residue for every species at site 1653 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro EEVAIKIIKN K K--------- Site 892
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo KRVALKKMPN V F--------- Site 889
Scheffersomyces.stipitis.SKY1 SHVAMKIVRS A K--------- Site 892
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep EIVALKRVRL D D--------- Site 889

Generated by PhyloBot at 15:55, October 23rd 2019
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