cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1652 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1652 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1652 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1652 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1652
in 'msaprobs'
muscle

The residue for every species at site 1652 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -KVVAIKSMK K KL-------- Site 888
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -KQVALKIVR S AR-------- Site 891
Danio.rerio.CDK1 -ETVALKKIR L DT-------- Site 888
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -EHVAVKKIA N AF-------- Site 888
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -EIVALKRVR L DD-------- Site 888
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -SEVALKRIK L DD-------- Site 888
Candida.guilliermondii.IME2 -PLVAIKTMN A RL-------- Site 888
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -EEVAVKLEN V KT-------- Site 891
Chlamydomonas.reinhardtii.LF4 -KYVAIKCMK N HF-------- Site 888
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -GFIAVKRVL Q DK-------- Site 891
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -EEVAIKMES A HA-------- Site 891
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 -LPVAIKFEP R KT-------- Site 888
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -KDYALKQIE G T--------- Site 892
Schizosaccharomyces.octosporus.b.IME2 -DQVVL---- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul -QKVAIKKIE P -F-------- Site 889
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -EKCIIKILK P VK-------- Site 893
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -EEVALKFET A KT-------- Site 891
Suberites.domuncula.JNK..Stress.activated.protein. -EKIAIKKLV K PF-------- Site 888
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -SQVALKIIR N VG-------- Site 891
Aedes.aegypti.CDK1 -QIVAMKKIR L ES-------- Site 888
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -RRVAVKIVK N VD-------- Site 891
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -ARVALKIIK N VE-------- Site 891
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -ELVALKIIR N KK-------- Site 891
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -EIVAIKILK N HP-------- Site 891
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -QIVAIKKFL E SE-------- Site 888
Species Residue at Site 1652
in 'msaprobs'
muscle

The residue for every species at site 1652 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -KIVALKKIR L EN-------- Site 888
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -ERVVVKILK P VK-------- Site 893
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -QRVAIKKIS P F--------- Site 889
Strongylocentrotus.purpuratus.CDK1 -KTVALKKIR L DT-------- Site 888
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -EIVAVKIES S KT-------- Site 891
Drosophila.melanogaster.CDK1 -QIVAMKKIR L ES-------- Site 888
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -EECAIKLEP A KT-------- Site 886
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -EEVAIKLEP A KA-------- Site 891
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -TYVALKIQK S AQ-------- Site 891
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -NLVALKEIR L EH-------- Site 889
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -QVIALKEIR L QQ-------- Site 889
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -RNVAIKKLS R PF-------- Site 888
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -RIVAIKKFL E SD-------- Site 888
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -RNVAIKKLS R PF-------- Site 888
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -EKVAIKKLS R PF-------- Site 888
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -KRVALKKMP N VF-------- Site 888
Bombus.terrestris.CDK1 -KLVALKKIR L ET-------- Site 888
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -KFVAMKVVK S AE-------- Site 891
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -QVVAVKKFL E SE-------- Site 888
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -RHVAIKKLS R PF-------- Site 888
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -ELVALKKVR L DN-------- Site 888
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -NYYACKQMK Q HF-------- Site 888
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -SLVAIKKVI Q DP-------- Site 891
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -MSVAIKKVI Q DP-------- Site 886
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -EEVAIKMES A HA-------- Site 891
Species Residue at Site 1652
in 'msaprobs'
muscle

The residue for every species at site 1652 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -EELAIKLEN V KT-------- Site 891
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -EIVAIKILK N HP-------- Site 891
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -EKCIIKILK P VK-------- Site 893
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -KRVALKKMP N VF-------- Site 888
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -QIVAIKKFL E SE-------- Site 888
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -EIVAIKILK N HP-------- Site 891
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -EIVALKRLK M EK-------- Site 888
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -ELVAIKKFK D SE-------- Site 888
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -TQVALKIIK N VE-------- Site 891
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -EIVALKRLK M EK-------- Site 888
Naegleria.gruberi.LF4 -QRVAIKCMK S KF-------- Site 888
Saccharomyces.bayanus.IME2 -GVVAIKTMM T KL-------- Site 888
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -ERVVVKILK P VK-------- Site 893
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -AKVAIKKLH R PF-------- Site 888
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -QIVAIKKIR K IL-------- Site 884
Dictyostelium.discoideum.DYRK1..Probable.serine.th -EYVAIKIIK N KV-------- Site 891
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -ELVAIKIIK N KK-------- Site 891
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -QHVALKMVR N EK-------- Site 891
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -EIVAIKKFK D SE-------- Site 888
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -EVVAIKKIF D AF-------- Site 888
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific -HVYAVKYVN L EE-------- Site 888
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -ELVALKIIR N KK-------- Site 891
Aspergillus.nidulans.IME2 -TLVAIKTMK K TF-------- Site 888
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -EKIALKHLI P TS-------- Site 892
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -KRVALKKMP N VF-------- Site 888
Species Residue at Site 1652
in 'msaprobs'
muscle

The residue for every species at site 1652 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -ELVAIKRMK R KF-------- Site 888
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -EVVALKKIR L DT-------- Site 888
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -RNVAIKKLS R PF-------- Site 888
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -ETVAIKKVL Q DK-------- Site 891
Penicillium.marneffei.IME2 -TMVAIKTMK K TF-------- Site 888
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -LRVAVKKLS R PF-------- Site 888
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -RKVAVKKIA L SD-------- Site 890
Drosophila.melanogaster.MAK -EKVAIKRMK R KY-------- Site 888
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -QTFAIKIIR N NE-------- Site 890
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -QEVAVKIIR N NE-------- Site 891
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -ELVALKKVR L DN-------- Site 888
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -NKVAVKKFR S TK-------- Site 888
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -EIVALKKVR M DK-------- Site 888
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -RNVAIKKLS R PF-------- Site 888
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -INVAVKKLS R PF-------- Site 888
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -RHVAVKIVK N VD-------- Site 891
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -EKIALKHLI P TS-------- Site 892
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -EEVAIKMES A HA-------- Site 891
Candida.parapsilosis.IME2 -NLVAIKTMK K KL-------- Site 888
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -RLFAIKKFK A ES-------- Site 881
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -ELVAIKKVL Q DK-------- Site 891
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -INVAVKKLS R PF-------- Site 888
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -EKVVVKILK P VK-------- Site 893
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -MHVAVKIVK N VG-------- Site 891
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -RKVAVKKIV L SD-------- Site 890
Species Residue at Site 1652
in 'msaprobs'
muscle

The residue for every species at site 1652 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -NLVALKEIR L EH-------- Site 889
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -EKVVVKILK P VK-------- Site 893
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -NQYAIKKFK A DK-------- Site 883
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -EKVAIKKLS R PF-------- Site 888
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -ELVAIKIIK N KK-------- Site 891
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -EKVVVKILK P VK-------- Site 892
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -EIVAIKKVL Q DK-------- Site 891
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -EVVAIKKVL Q DQ-------- Site 891
Candida.orthopsilosis.IME2 -NLVAIKTMK K KL-------- Site 888
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -TIVAIKKL- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -KPVAIKKLS R PF-------- Site 888
Debaryomyces.hansenii.IME2 -CLVAIKTMK T PL-------- Site 888
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -ETVAIKKVL Q DK-------- Site 891
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin TPFYAIKKFK T ER-------- Site 882
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -VQCALKMIR T DR-------- Site 888
Caenorhabditis.briggsae.CDK1 -AMVAMKKIR L ES-------- Site 888
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -EKCVVKILK P VK-------- Site 893
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -EIVALKKVA L RR-------- Site 888
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -QYVALKMVR N EK-------- Site 891
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -RFVALKRVR V QT-------- Site 888
Monosiga.brevicollis.CDK1 -QIVALKKIR L ES-------- Site 888
Saccharomyces.cerevisiae.SKY1 -THVAMKIVR G DK-------- Site 891
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -QKVAIKKIV P -F-------- Site 889
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -QIVAIKKFL D SE-------- Site 886
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -ELVAIKKVL Q DR-------- Site 891
Species Residue at Site 1652
in 'msaprobs'
muscle

The residue for every species at site 1652 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -EEFAVKLES T RS-------- Site 891
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -EVVAIKKIF D AF-------- Site 888
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -RIVAIKKFL E SD-------- Site 888
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -RIVALKKVK I GQ-------- Site 887
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -EIVAIKKFK D SE-------- Site 888
Ajellomyces.capsulatus.CDK1 -RIVALKKIR L EA-------- Site 888
Dictystelium.discoideum.MAPK3..Extracellular.signa -EKVAIKKIS K AF-------- Site 888
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -RFVALKRVR V QT-------- Site 888
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -EIVALKKVR M DK-------- Site 888
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -RNVAIKKLS R PF-------- Site 888
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -EKVAIKKLS R PF-------- Site 888
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -NIVALKKVR I SL-------- Site 888
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -KRVALKKMP N VF-------- Site 888
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -RNVAIKKLS R PF-------- Site 888
Saccharomyces.cerevisiae.CDK1 -RVVALKKIR L ES-------- Site 888
Lodderomyces.elongisporus.IME2 -NLVAIKTMK K KL-------- Site 888
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -FKVAVKKLS R PF-------- Site 888
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -ARVALKIIK N VE-------- Site 891
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -EIVAIKKFK D SE-------- Site 888
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -RMLSLRRFY R IR-------- Site 891
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -NTVALKKVF D AF-------- Site 888
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -MHVAVKIVK N VG-------- Site 891
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -EIVAIKILK N HP-------- Site 891
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -QIVAIKRFL E TE-------- Site 888
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -ELVAIKKVL Q DK-------- Site 886
Species Residue at Site 1652
in 'msaprobs'
muscle

The residue for every species at site 1652 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -AMVAMKKIR L ES-------- Site 888
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -HFVALKSVR V PN-------- Site 885
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -DVFAIKKFK P DK-------- Site 883
Salmo.salar.CDK1 -ETVALKKIR L DT-------- Site 888
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -RIVAIKKIK L GH-------- Site 885
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -EIVALKKVA L RR-------- Site 888
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi -QIYAIKYVN L EE-------- Site 888
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -ELVAIKKVL Q DK-------- Site 886
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -VKHVIKQVE C MD-------- Site 890
Aspergillus.fumigatus.IME2 -TMVAIKTMK K TF-------- Site 888
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -RDYALKQIE G T--------- Site 892
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -RQIALKIIK N QE-------- Site 891
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -EKVAIKKLC R PF-------- Site 888
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -KRVALKKMP N VF-------- Site 888
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -EIVAIKILK N HP-------- Site 891
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -TRVAIKKIS P F--------- Site 889
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -NLVALKEIR L EH-------- Site 889
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -EIVALKKVR M DK-------- Site 888
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -QIVAIKKFV E SE-------- Site 888
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -QNVAIKKLS R PF-------- Site 888
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -SKVAVKKLY R PF-------- Site 888
Candida.glabrata.IME2 -GLVAIKTML T RL-------- Site 888
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -ELVAIKRMK R KF-------- Site 888
Schizosaccharomyces.pombe.IME2 -EVVAIKSMK K KL-------- Site 888
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -QKVAIKKIE P -F-------- Site 889
Species Residue at Site 1652
in 'msaprobs'
muscle

The residue for every species at site 1652 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -EIVALKRVR L DE-------- Site 888
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -EMVAIKILK N DA-------- Site 892
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -EEVAVKLES Q KA-------- Site 891
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -NLVALKEIR L EH-------- Site 889
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -QVVAIKKFV E SE-------- Site 888
Branchiostoma.floridae.CDK1 -RMVALKKIR L DT-------- Site 888
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -VRVALKIIK N VE-------- Site 891
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -SKAAIKRVL Q DK-------- Site 891
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -QIVAIKKFL E ED-------- Site 889
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -EMVAIKKVL Q DK-------- Site 891
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. -ETVALKKVR M DN-------- Site 888
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -ELIAIKKMK R KF-------- Site 888
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -SQVALKIIR N VG-------- Site 891
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -EWVAIKIIK N KK-------- Site 891
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -EVVALKKIR L DT-------- Site 888
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -QQVAIKKIP N AF-------- Site 888
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -LRVAVKKLS R PF-------- Site 888
Lachancea.thermotolerans.SKY1 -AHVAMKIVR S DK-------- Site 891
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -KRVAIKKIV L TD-------- Site 890
Dictyostelium.discoideum.CDK1 -RMVALKKIR L ED-------- Site 890
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -NKVAIKKLY R PF-------- Site 888
Xenopus.tropicalis.IME2 -EIVALKKIR L DT-------- Site 888
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -EIVAIKILK N HP-------- Site 891
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -EKVVVKILK P VK-------- Site 893
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -EIVALKKIR L DT-------- Site 888
Species Residue at Site 1652
in 'msaprobs'
muscle

The residue for every species at site 1652 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -QLVALKKIR L DA-------- Site 888
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -QLVALKVIS M NA-------- Site 889
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -QTVALKKIF D AF-------- Site 888
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -EWVAIKIIK N KK-------- Site 891
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -ELVAIKKVL Q DK-------- Site 886
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -EMVAIKKVL Q DR-------- Site 891
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -RIVALKKVR M EK-------- Site 888
Encephalitozoon.cuniculi.CDK1 -RVVALKKIR L EN-------- Site 888
Saccharomyces.kluyveri.IME2 -GVVAIKTMM T RL-------- Site 888
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -LHVAVKIVK N VG-------- Site 891
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -VRVAIKKIS P F--------- Site 889
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -QLVALKVIS M NA-------- Site 889
Cryptococcus.neoformans.IME2 -RLVALKRMK R VW-------- Site 888
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -EMVAIKILK N DA-------- Site 892
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -KFVAMKVVK S AE-------- Site 886
Candida.lusitaniae.IME2 -GLVAVKVMK T QL-------- Site 888
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -EIVAIKILK N HP-------- Site 891
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -KDYALKQIE G T--------- Site 892
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -ETVALKKVA L RR-------- Site 888
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -QIVAIKKFV E SE-------- Site 888
Gallus.gallus.CDK2 -EVVALKKIR L DT-------- Site 888
Emericella.nidulans.CDK1 -RIVALKKIR L EA-------- Site 888
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -NYYACKQMK Q RF-------- Site 888
Homo.sapiens.CDK1 -QVVAMKKIR L ES-------- Site 888
Candida.albicans.CDK1 -RVVALKKIR L ES-------- Site 888
Species Residue at Site 1652
in 'msaprobs'
muscle

The residue for every species at site 1652 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -EKVVVKILK P VK-------- Site 893
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -QQVAIKKIP N AF-------- Site 888
Mus.musculus.ICK..Serine.threonine.protein.kinase. -ELIAIKKMK R KF-------- Site 888
Saccharomyces.castelli.IME2 -RLVAIKTML T KL-------- Site 888
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -SRVALKIIK N ID-------- Site 891
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -QIVAIKKIK L GH-------- Site 885
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -KLVALKVIR L QE-------- Site 889
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -DVVAIKKVL Q DK-------- Site 891
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -NYVALKKIY V TS-------- Site 892
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -TIVAIKKIK V GH-------- Site 885
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -QKVALKKVL M EN-------- Site 888
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -EIVAIKILK N HP-------- Site 891
Acyrthosiphon.pisum.CDK1 -KFVALKKVR M ES-------- Site 888
Candida.tropicalis.CDK1 -NLVAIKTMK K KL-------- Site 888
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -KEYALKQID G T--------- Site 892
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -DSVAIKKVL Q DK-------- Site 891
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -EKCVVKILK P VK-------- Site 893
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -NLVALKEIR L EH-------- Site 889
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -EKCIIKILK P VK-------- Site 893
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -NLVALKEIR L EH-------- Site 889
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -EKVAIKKLC R PF-------- Site 888
Candida.albicans.SSN3..Serine.threonine.protein.ki -QFFAIKKFK S DNHHHHINNN Site 871
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -KYVAIKCMK N HF-------- Site 888
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -DLVAIKKVL Q DK-------- Site 891
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -EKVAIKKLH R PF-------- Site 888
Species Residue at Site 1652
in 'msaprobs'
muscle

The residue for every species at site 1652 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -KVYALKRIL M HT-------- Site 888
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -EKVVVKILK P VK-------- Site 893
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -EVVAVKILK N HP-------- Site 891
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -EIVALKRLK M EK-------- Site 888
Candida.dubliniensis.IME2 -NLVAIKTMK K KL-------- Site 888
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -INVAVKKLS R PF-------- Site 888
Aspergillus.niger.IME2 -TMVAIKTMK K TF-------- Site 888
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -LRIAVKKLS R PF-------- Site 888
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -QIVAIKIFY E RP-------- Site 889
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -KLVALKVIR L QE-------- Site 889
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -EKVVVKILK P VK-------- Site 893
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -EEVAIKIIK N KK-------- Site 891
Schizosaccharomyces.japonicus.IME2 -ELFAIKSMK T PL-------- Site 888
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -EQVAIKKLS R PF-------- Site 888
Gallus.gallus.CDK1 -QVVAMKKIR L ES-------- Site 888
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -EIVALKRVR L DD-------- Site 888
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -EDAAIKRVL Q DK-------- Site 871
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -KDYALKQIV M SA-------- Site 888
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -EMVAIKKVL Q DK-------- Site 886
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -AKVAIKKLY R PF-------- Site 888
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -QKCVIKVLK P VK-------- Site 892
Kluyveromyces.waltii.IME2 -GVLAIKTMM T RL-------- Site 888
Debaryomyces.hansenii.SKY1 -CHVAMKIVR S AK-------- Site 891
Saccharomyces.cerevisiae.IME2 -GVVAIKTMM T KL-------- Site 888
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1652
in 'msaprobs'
muscle

The residue for every species at site 1652 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -RFVALKRVR V QT-------- Site 888
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -ERVVVKILK P VK-------- Site 893
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -KRVAIKKIV L TD-------- Site 890
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -RFVALKRVR V QT-------- Site 888
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -QKVAIKKVL Q DR-------- Site 891
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -TKVAIKKLY R PF-------- Site 888
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -RIVAIKIFY E KP-------- Site 889
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -RNVAIKKLS R PF-------- Site 888
Candida.albicans.IME2 -NLVAIKTMK K KL-------- Site 888
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -KFVALKNVR V QT-------- Site 888
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -EIVALKKIK M ER-------- Site 888
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -HRVAVKKLS R PF-------- Site 888
Kluyveromyces.lactis.IME2 -GIVAIKTMM N RL-------- Site 888
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -QQVAIKKIP N AF-------- Site 888
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -RNVAIKKLS R PF-------- Site 888
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -QKVAVKKLS R PF-------- Site 888
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -EEVAIKMES A HA-------- Site 891
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -QKVAVKKLS R PF-------- Site 888
Amphimedon.queenslandica.CDK1 NRVVALKKIR L DA-------- Site 888
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -QVVAVKKFV E SE-------- Site 888
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -QLVALKKIR L DA-------- Site 888
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -EIVALKRLK M EK-------- Site 888
Neurospora.crassa.IME2 -TVIAIKTMK K TF-------- Site 888
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -EIVALKRVR L DE-------- Site 888
Dictyostelium.discoideum.DYRK2..Probable.serine.th -EMVALKILR N QK-------- Site 891
Species Residue at Site 1652
in 'msaprobs'
muscle

The residue for every species at site 1652 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -HFVALKSVR V PN-------- Site 885
Hydra.magnipapillata.CDK1 -KVIALKKIR L DT-------- Site 888
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -ETVALKKVR M DN-------- Site 888
Ashbya.gossypii.IME2 -GLVAIKTMM T RL-------- Site 888
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi -QINAIKYVN L ED-------- Site 887
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -QYVALKMVR N EK-------- Site 891
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -EKVAIKKVL Q DK-------- Site 890
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -ETVAVKKIF D AF-------- Site 886
Schizosaccharomyces.pombe.b.IME2 -ETVAVKKLK N SS-------- Site 887
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -VRVAIKKIS P F--------- Site 889
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -EIVAIKILK N HP-------- Site 891
Schizosaccharomyces.pombe.CDK1 -RIVAMKKIR L ED-------- Site 888
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -VSVALKIIK N VE-------- Site 891
Saccoglossus.kowalevskii.CDK1 -KMVALKKIR L DT-------- Site 888
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -EEVAIKLEC V KT-------- Site 886
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -RNVAIKKLS R PF-------- Site 888
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -QLVALKKIR L DL-------- Site 888
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -TKFLIKQVE C ID-------- Site 890
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -QLVALKKIR L DL-------- Site 888
Yarrowia.lipolytica.IME2 -SMVAIKTMK K KL-------- Site 888
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil TVFYAIKKFK T EK-------- Site 882
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -ETVALKKIR L DT-------- Site 888
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -KHVAIKRIY V TS-------- Site 892
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -EDAAIKRVL Q DK-------- Site 886
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -SKAAIKRVL Q DK-------- Site 891
Species Residue at Site 1652
in 'msaprobs'
muscle

The residue for every species at site 1652 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -EEVAIKIIK N KK-------- Site 891
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -KRVALKKMP N VF-------- Site 888
Scheffersomyces.stipitis.SKY1 -SHVAMKIVR S AK-------- Site 891
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -EIVALKRVR L DD-------- Site 888

Generated by PhyloBot at 09:33, February 29th 2020
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