cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1645 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1645 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1645 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1645 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1645
in 'msaprobs'
muscle

The residue for every species at site 1645 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 --------KV V AIKSMKKKL- Site 864
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD --------KQ V ALKIVRSAR- Site 864
Danio.rerio.CDK1 --------ET V ALKKIRLDT- Site 864
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge --------EH V AVKKIANAF- Site 864
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d --------EI V ALKRVRLDD- Site 864
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK --------SE V ALKRIKLDD- Site 864
Candida.guilliermondii.IME2 --------PL V AIKTMNARL- Site 864
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ --------EE V AVKLENVKT- Site 864
Chlamydomonas.reinhardtii.LF4 --------KY V AIKCMKNHF- Site 864
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g --------GF I AVKRVLQDK- Site 864
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 --------EE V AIKMESAHA- Site 864
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 --------LP V AIKFEPRKT- Site 864
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho --------KD Y ALKQIEGT-- Site 864
Schizosaccharomyces.octosporus.b.IME2 --------DQ V VL-------- Site 864
Candida.albicans.MAPK3..Extracellular.signal.regul --------QK V AIKKIEP-F- Site 864
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. --------EK C IIKILKPVK- Site 864
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 --------EE V ALKFETAKT- Site 864
Suberites.domuncula.JNK..Stress.activated.protein. --------EK I AIKKLVKPF- Site 864
Homo.sapiens.CLK3..Dual.specificity.protein.kinase --------SQ V ALKIIRNVG- Site 864
Aedes.aegypti.CDK1 --------QI V AMKKIRLES- Site 864
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci --------RR V AVKIVKNVD- Site 864
Homo.sapiens.CLK2..Dual.specificity.protein.kinase --------AR V ALKIIKNVE- Site 864
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos --------EL V ALKIIRNKK- Site 864
Homo.sapiens.HIPK1..Homeodomain.interacting.protei --------EI V AIKILKNHP- Site 864
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar --------QI V AIKKFLESE- Site 864
Species Residue at Site 1645
in 'msaprobs'
muscle

The residue for every species at site 1645 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 --------KI V ALKKIRLEN- Site 864
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. --------ER V VVKILKPVK- Site 864
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM --------QR V AIKKISPF-- Site 864
Strongylocentrotus.purpuratus.CDK1 --------KT V ALKKIRLDT- Site 864
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca --------EI V AVKIESSKT- Site 864
Drosophila.melanogaster.CDK1 --------QI V AMKKIRLES- Site 864
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 --------EE C AIKLEPAKT- Site 864
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. --------EE V AIKLEPAKA- Site 864
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH --------TY V ALKIQKSAQ- Site 864
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d --------NL V ALKEIRLEH- Site 864
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. --------QV I ALKEIRLQQ- Site 864
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET --------RN V AIKKLSRPF- Site 864
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 --------RI V AIKKFLESD- Site 864
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U --------RN V AIKKLSRPF- Site 864
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. --------EK V AIKKLSRPF- Site 864
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo --------KR V ALKKMPNVF- Site 864
Bombus.terrestris.CDK1 --------KL V ALKKIRLET- Site 864
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 --------KF V AMKVVKSAE- Site 864
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar --------QV V AVKKFLESE- Site 864
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. --------RH V AIKKLSRPF- Site 864
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d --------EL V ALKKVRLDN- Site 864
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. --------NY Y ACKQMKQHF- Site 864
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. --------SL V AIKKVIQDP- Site 864
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G --------MS V AIKKVIQDP- Site 864
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 --------EE V AIKMESAHA- Site 864
Species Residue at Site 1645
in 'msaprobs'
muscle

The residue for every species at site 1645 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 --------EE L AIKLENVKT- Site 864
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO --------EI V AIKILKNHP- Site 864
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C --------EK C IIKILKPVK- Site 864
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl --------KR V ALKKMPNVF- Site 864
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 --------QI V AIKKFLESE- Site 864
Homo.sapiens.HIPK3..Homeodomain.interacting.protei --------EI V AIKILKNHP- Site 864
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O --------EI V ALKRLKMEK- Site 864
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d --------EL V AIKKFKDSE- Site 864
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci --------TQ V ALKIIKNVE- Site 864
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O --------EI V ALKRLKMEK- Site 864
Naegleria.gruberi.LF4 --------QR V AIKCMKSKF- Site 864
Saccharomyces.bayanus.IME2 --------GV V AIKTMMTKL- Site 864
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. --------ER V VVKILKPVK- Site 864
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a --------AK V AIKKLHRPF- Site 864
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki --------QI V AIKKIRKIL- Site 864
Dictyostelium.discoideum.DYRK1..Probable.serine.th --------EY V AIKIIKNKV- Site 864
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos --------EL V AIKIIKNKK- Site 864
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos --------QH V ALKMVRNEK- Site 864
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d --------EI V AIKKFKDSE- Site 864
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a --------EV V AIKKIFDAF- Site 864
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific --------HV Y AVKYVNLEE- Site 864
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos --------EL V ALKIIRNKK- Site 864
Aspergillus.nidulans.IME2 --------TL V AIKTMKKTF- Site 864
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi --------EK I ALKHLIPTS- Site 864
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se --------KR V ALKKMPNVF- Site 864
Species Residue at Site 1645
in 'msaprobs'
muscle

The residue for every species at site 1645 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. --------EL V AIKRMKRKF- Site 864
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep --------EV V ALKKIRLDT- Site 864
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. --------RN V AIKKLSRPF- Site 864
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. --------ET V AIKKVLQDK- Site 864
Penicillium.marneffei.IME2 --------TM V AIKTMKKTF- Site 864
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen --------LR V AVKKLSRPF- Site 864
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a --------RK V AVKKIALSD- Site 864
Drosophila.melanogaster.MAK --------EK V AIKRMKRKY- Site 864
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH --------QT F AIKIIRNNE- Site 864
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr --------QE V AVKIIRNNE- Site 864
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de --------EL V ALKKVRLDN- Site 864
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep --------NK V AVKKFRSTK- Site 864
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d --------EI V ALKKVRMDK- Site 864
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin --------RN V AIKKLSRPF- Site 864
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a --------IN V AVKKLSRPF- Site 864
Homo.sapiens.CLK1..Dual.specificity.protein.kinase --------RH V AVKIVKNVD- Site 864
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis --------EK I ALKHLIPTS- Site 864
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 --------EE V AIKMESAHA- Site 864
Candida.parapsilosis.IME2 --------NL V AIKTMKKKL- Site 864
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p --------RL F AIKKFKAES- Site 864
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen --------EL V AIKKVLQDK- Site 864
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. --------IN V AVKKLSRPF- Site 864
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki --------EK V VVKILKPVK- Site 864
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U --------MH V AVKIVKNVG- Site 864
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a --------RK V AVKKIVLSD- Site 864
Species Residue at Site 1645
in 'msaprobs'
muscle

The residue for every species at site 1645 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d --------NL V ALKEIRLEH- Site 864
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. --------EK V VVKILKPVK- Site 864
Yarrowia.lipolytica.SSN3..Serine.threonine.protein --------NQ Y AIKKFKADK- Site 864
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. --------EK V AIKKLSRPF- Site 864
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos --------EL V AIKIIKNKK- Site 864
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE --------EK V VVKILKPVK- Site 864
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH --------EI V AIKKVLQDK- Site 864
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD --------EV V AIKKVLQDQ- Site 864
Candida.orthopsilosis.IME2 --------NL V AIKTMKKKL- Site 864
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot --------TI V AIKKL----- Site 864
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str --------KP V AIKKLSRPF- Site 864
Debaryomyces.hansenii.IME2 --------CL V AIKTMKTPL- Site 864
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati --------ET V AIKKVLQDK- Site 864
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin LPKKSAFTPF Y AIKKFKTER- Site 864
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE --------VQ C ALKMIRTDR- Site 864
Caenorhabditis.briggsae.CDK1 --------AM V AMKKIRLES- Site 864
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO --------EK C VVKILKPVK- Site 864
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de --------EI V ALKKVALRR- Site 864
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos --------QY V ALKMVRNEK- Site 864
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. --------RF V ALKRVRVQT- Site 864
Monosiga.brevicollis.CDK1 --------QI V ALKKIRLES- Site 864
Saccharomyces.cerevisiae.SKY1 --------TH V AMKIVRGDK- Site 864
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP --------QK V AIKKIVP-F- Site 864
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U --------QI V AIKKFLDSE- Site 864
Drosophila.melanogaster.GSK3..Protein.kinase.shagg --------EL V AIKKVLQDR- Site 864
Species Residue at Site 1645
in 'msaprobs'
muscle

The residue for every species at site 1645 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas --------EE F AVKLESTRS- Site 864
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. --------EV V AIKKIFDAF- Site 864
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d --------RI V AIKKFLESD- Site 864
Dictyostelium.discoideum.CDK10..Probable.cyclin.de --------RI V ALKKVKIGQ- Site 864
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d --------EI V AIKKFKDSE- Site 864
Ajellomyces.capsulatus.CDK1 --------RI V ALKKIRLEA- Site 864
Dictystelium.discoideum.MAPK3..Extracellular.signa --------EK V AIKKISKAF- Site 864
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep --------RF V ALKRVRVQT- Site 864
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep --------EI V ALKKVRMDK- Site 864
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac --------RN V AIKKLSRPF- Site 864
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. --------EK V AIKKLSRPF- Site 864
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO --------NI V ALKKVRISL- Site 864
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri --------KR V ALKKMPNVF- Site 864
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha --------RN V AIKKLSRPF- Site 864
Saccharomyces.cerevisiae.CDK1 --------RV V ALKKIRLES- Site 864
Lodderomyces.elongisporus.IME2 --------NL V AIKTMKKKL- Site 864
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen --------FK V AVKKLSRPF- Site 864
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un --------AR V ALKIIKNVE- Site 864
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar --------EI V AIKKFKDSE- Site 864
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. --------RM L SLRRFYRIR- Site 864
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D --------NT V ALKKVFDAF- Site 864
Homo.sapiens.CLK4..Dual.specificity.protein.kinase --------MH V AVKIVKNVG- Site 864
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U --------EI V AIKILKNHP- Site 864
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d --------QI V AIKRFLETE- Site 864
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen --------EL V AIKKVLQDK- Site 864
Species Residue at Site 1645
in 'msaprobs'
muscle

The residue for every species at site 1645 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 --------AM V AMKKIRLES- Site 864
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep --------HF V ALKSVRVPN- Site 864
Cryptococcus.neoformans.SSN3..Serine.threonine.pro --------DV F AIKKFKPDK- Site 864
Salmo.salar.CDK1 --------ET V ALKKIRLDT- Site 864
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d --------RI V AIKKIKLGH- Site 864
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d --------EI V ALKKVALRR- Site 864
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi --------QI Y AIKYVNLEE- Site 864
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen --------EL V AIKKVLQDK- Site 864
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable --------VK H VIKQVECMD- Site 864
Aspergillus.fumigatus.IME2 --------TM V AIKTMKKTF- Site 864
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan --------RD Y ALKQIEGT-- Site 864
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha --------RQ I ALKIIKNQE- Site 864
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha --------EK V AIKKLCRPF- Site 864
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S --------KR V ALKKMPNVF- Site 864
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma --------EI V AIKILKNHP- Site 864
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina --------TR V AIKKISPF-- Site 864
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d --------NL V ALKEIRLEH- Site 864
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. --------EI V ALKKVRMDK- Site 864
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de --------QI V AIKKFVESE- Site 864
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S --------QN V AIKKLSRPF- Site 864
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. --------SK V AVKKLYRPF- Site 864
Candida.glabrata.IME2 --------GL V AIKTMLTRL- Site 864
Homo.sapiens.MAK..Serine.threonine.protein.kinase. --------EL V AIKRMKRKF- Site 864
Schizosaccharomyces.pombe.IME2 --------EV V AIKSMKKKL- Site 864
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P --------QK V AIKKIEP-F- Site 864
Species Residue at Site 1645
in 'msaprobs'
muscle

The residue for every species at site 1645 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl --------EI V ALKRVRLDE- Site 864
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom --------EM V AIKILKNDA- Site 864
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. --------EE V AVKLESQKA- Site 864
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d --------NL V ALKEIRLEH- Site 864
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d --------QV V AIKKFVESE- Site 864
Branchiostoma.floridae.CDK1 --------RM V ALKKIRLDT- Site 864
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara --------VR V ALKIIKNVE- Site 864
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH --------SK A AIKRVLQDK- Site 864
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD --------QI V AIKKFLEED- Site 864
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR --------EM V AIKKVLQDK- Site 864
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. --------ET V ALKKVRMDN- Site 864
Homo.sapiens.ICK..Serine.threonine.protein.kinase. --------EL I AIKKMKRKF- Site 864
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci --------SQ V ALKIIRNVG- Site 864
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos --------EW V AIKIIKNKK- Site 864
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep --------EV V ALKKIRLDT- Site 864
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act --------QQ V AIKKIPNAF- Site 864
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. --------LR V AVKKLSRPF- Site 864
Lachancea.thermotolerans.SKY1 --------AH V AMKIVRSDK- Site 864
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a --------KR V AIKKIVLTD- Site 864
Dictyostelium.discoideum.CDK1 --------RM V ALKKIRLED- Site 864
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. --------NK V AIKKLYRPF- Site 864
Xenopus.tropicalis.IME2 --------EI V ALKKIRLDT- Site 864
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U --------EI V AIKILKNHP- Site 864
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. --------EK V VVKILKPVK- Site 864
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d --------EI V ALKKIRLDT- Site 864
Species Residue at Site 1645
in 'msaprobs'
muscle

The residue for every species at site 1645 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara --------QL V ALKKIRLDA- Site 864
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. --------QL V ALKVISMNA- Site 864
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD --------QT V ALKKIFDAF- Site 864
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos --------EW V AIKIIKNKK- Site 864
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen --------EL V AIKKVLQDK- Site 864
Drosophila.melanogaster.GSK3H..Putative.glycogen.s --------EM V AIKKVLQDR- Site 864
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD --------RI V ALKKVRMEK- Site 864
Encephalitozoon.cuniculi.CDK1 --------RV V ALKKIRLEN- Site 864
Saccharomyces.kluyveri.IME2 --------GV V AIKTMMTRL- Site 864
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci --------LH V AVKIVKNVG- Site 864
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a --------VR V AIKKISPF-- Site 864
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. --------QL V ALKVISMNA- Site 864
Cryptococcus.neoformans.IME2 --------RL V ALKRMKRVW- Site 864
Homo.sapiens.HIPK4..Homeodomain.interacting.protei --------EM V AIKILKNDA- Site 864
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote --------KF V AMKVVKSAE- Site 864
Candida.lusitaniae.IME2 --------GL V AVKVMKTQL- Site 864
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom --------EI V AIKILKNHP- Site 864
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A --------KD Y ALKQIEGT-- Site 864
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep --------ET V ALKKVALRR- Site 864
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. --------QI V AIKKFVESE- Site 864
Gallus.gallus.CDK2 --------EV V ALKKIRLDT- Site 864
Emericella.nidulans.CDK1 --------RI V ALKKIRLEA- Site 864
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. --------NY Y ACKQMKQRF- Site 864
Homo.sapiens.CDK1 --------QV V AMKKIRLES- Site 864
Candida.albicans.CDK1 --------RV V ALKKIRLES- Site 864
Species Residue at Site 1645
in 'msaprobs'
muscle

The residue for every species at site 1645 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca --------EK V VVKILKPVK- Site 864
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a --------QQ V AIKKIPNAF- Site 864
Mus.musculus.ICK..Serine.threonine.protein.kinase. --------EL I AIKKMKRKF- Site 864
Saccharomyces.castelli.IME2 --------RL V AIKTMLTKL- Site 864
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec --------SR V ALKIIKNID- Site 864
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep --------QI V AIKKIKLGH- Site 864
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. --------KL V ALKVIRLQE- Site 864
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly --------DV V AIKKVLQDK- Site 864
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS --------NY V ALKKIYVTS- Site 864
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli --------TI V AIKKIKVGH- Site 864
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho --------QK V ALKKVLMEN- Site 864
Homo.sapiens.HIPK2..Homeodomain.interacting.protei --------EI V AIKILKNHP- Site 864
Acyrthosiphon.pisum.CDK1 --------KF V ALKKVRMES- Site 864
Candida.tropicalis.CDK1 --------NL V AIKTMKKKL- Site 864
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin --------KE Y ALKQIDGT-- Site 864
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G --------DS V AIKKVLQDK- Site 864
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR --------EK C VVKILKPVK- Site 864
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de --------NL V ALKEIRLEH- Site 864
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 --------EK C IIKILKPVK- Site 864
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d --------NL V ALKEIRLEH- Site 864
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA --------EK V AIKKLCRPF- Site 864
Candida.albicans.SSN3..Serine.threonine.protein.ki --------QF F AIKKFKSDNH Site 864
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF --------KY V AIKCMKNHF- Site 864
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA --------DL V AIKKVLQDK- Site 864
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara --------EK V AIKKLHRPF- Site 864
Species Residue at Site 1645
in 'msaprobs'
muscle

The residue for every species at site 1645 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de --------KV Y ALKRILMHT- Site 864
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei --------EK V VVKILKPVK- Site 864
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U --------EV V AVKILKNHP- Site 864
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d --------EI V ALKRLKMEK- Site 864
Candida.dubliniensis.IME2 --------NL V AIKTMKKKL- Site 864
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a --------IN V AVKKLSRPF- Site 864
Aspergillus.niger.IME2 --------TM V AIKTMKKTF- Site 864
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge --------LR I AVKKLSRPF- Site 864
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d --------QI V AIKIFYERP- Site 864
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. --------KL V ALKVIRLQE- Site 864
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein --------EK V VVKILKPVK- Site 864
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty --------EE V AIKIIKNKK- Site 864
Schizosaccharomyces.japonicus.IME2 --------EL F AIKSMKTPL- Site 864
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. --------EQ V AIKKLSRPF- Site 864
Gallus.gallus.CDK1 --------QV V AMKKIRLES- Site 864
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep --------EI V ALKRVRLDD- Site 864
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P --------ED A AIKRVLQDK- Site 864
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE --------KD Y ALKQIVMSA- Site 864
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. --------EM V AIKKVLQDK- Site 864
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. --------AK V AIKKLYRPF- Site 864
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ --------QK C VIKVLKPVK- Site 864
Kluyveromyces.waltii.IME2 --------GV L AIKTMMTRL- Site 864
Debaryomyces.hansenii.SKY1 --------CH V AMKIVRSAK- Site 864
Saccharomyces.cerevisiae.IME2 --------GV V AIKTMMTKL- Site 864
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1645
in 'msaprobs'
muscle

The residue for every species at site 1645 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un --------RF V ALKRVRVQT- Site 864
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein --------ER V VVKILKPVK- Site 864
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a --------KR V AIKKIVLTD- Site 864
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep --------RF V ALKRVRVQT- Site 864
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST --------QK V AIKKVLQDR- Site 864
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk --------TK V AIKKLYRPF- Site 864
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de --------RI V AIKIFYEKP- Site 864
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act --------RN V AIKKLSRPF- Site 864
Candida.albicans.IME2 --------NL V AIKTMKKKL- Site 864
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d --------KF V ALKNVRVQT- Site 864
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k --------EI V ALKKIKMER- Site 864
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. --------HR V AVKKLSRPF- Site 864
Kluyveromyces.lactis.IME2 --------GI V AIKTMMNRL- Site 864
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina --------QQ V AIKKIPNAF- Site 864
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. --------RN V AIKKLSRPF- Site 864
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. --------QK V AVKKLSRPF- Site 864
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 --------EE V AIKMESAHA- Site 864
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. --------QK V AVKKLSRPF- Site 864
Amphimedon.queenslandica.CDK1 -------NRV V ALKKIRLDA- Site 864
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d --------QV V AVKKFVESE- Site 864
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U --------QL V ALKKIRLDA- Site 864
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME --------EI V ALKRLKMEK- Site 864
Neurospora.crassa.IME2 --------TV I AIKTMKKTF- Site 864
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME --------EI V ALKRVRLDE- Site 864
Dictyostelium.discoideum.DYRK2..Probable.serine.th --------EM V ALKILRNQK- Site 864
Species Residue at Site 1645
in 'msaprobs'
muscle

The residue for every species at site 1645 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep --------HF V ALKSVRVPN- Site 864
Hydra.magnipapillata.CDK1 --------KV I ALKKIRLDT- Site 864
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar --------ET V ALKKVRMDN- Site 864
Ashbya.gossypii.IME2 --------GL V AIKTMMTRL- Site 864
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi --------QI N AIKYVNLED- Site 864
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos --------QY V ALKMVRNEK- Site 864
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p --------EK V AIKKVLQDK- Site 864
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace --------ET V AVKKIFDAF- Site 864
Schizosaccharomyces.pombe.b.IME2 --------ET V AVKKLKNSS- Site 864
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a --------VR V AIKKISPF-- Site 864
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom --------EI V AIKILKNHP- Site 864
Schizosaccharomyces.pombe.CDK1 --------RI V AMKKIRLED- Site 864
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch --------VS V ALKIIKNVE- Site 864
Saccoglossus.kowalevskii.CDK1 --------KM V ALKKIRLDT- Site 864
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas --------EE V AIKLECVKT- Site 864
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac --------RN V AIKKLSRPF- Site 864
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep --------QL V ALKKIRLDL- Site 864
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable --------TK F LIKQVECID- Site 864
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep --------QL V ALKKIRLDL- Site 864
Yarrowia.lipolytica.IME2 --------SM V AIKTMKKKL- Site 864
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil TLIKKPLTVF Y AIKKFKTEK- Site 864
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli --------ET V ALKKIRLDT- Site 864
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K --------KH V AIKRIYVTS- Site 864
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly --------ED A AIKRVLQDK- Site 864
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk --------SK A AIKRVLQDK- Site 864
Species Residue at Site 1645
in 'msaprobs'
muscle

The residue for every species at site 1645 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro --------EE V AIKIIKNKK- Site 864
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo --------KR V ALKKMPNVF- Site 864
Scheffersomyces.stipitis.SKY1 --------SH V AMKIVRSAK- Site 864
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep --------EI V ALKRVRLDD- Site 864

Generated by PhyloBot at 15:37, October 23rd 2019
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