cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 16 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 16 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 16 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 16 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 16
in 'msaprobs'
muscle

The residue for every species at site 16 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - --M------K  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - --M------S  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - --M------E  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - --M------E  
Candida.guilliermondii.IME2 ---------- - --M------V  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - --M------D  
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - --M------S  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - --M------D  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - --M------S  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - --M------D  
Schizosaccharomyces.octosporus.b.IME2 ---------- - --M------S  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - --M------N  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - --M------H  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - --M------C  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - --M------S  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - --M------P  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - --M------R  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - --M------P  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - --M------P  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---------- - --M------A  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 16
in 'msaprobs'
muscle

The residue for every species at site 16 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - --M------S  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - --M------P  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - --M------E  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - --M------D  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - --M------D  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - --M------S  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - --M------N  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- - --M------G  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------- - --M------S  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------- - --M------S  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - --M------S  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- - --M------S  
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - --M------E  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - --M-------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - --M------S  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---------- - --M------P  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - --M------S  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - --M------S  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - --M------D  
Species Residue at Site 16
in 'msaprobs'
muscle

The residue for every species at site 16 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - --M------E  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------- - --M------I  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - --M------I  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- - --M------S  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---------- - --M------A  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- - --M------G  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - --M------K  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - --M------P  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- - --M------G  
Naegleria.gruberi.LF4 ---------- - --M------T  
Saccharomyces.bayanus.IME2 ---------- - --M------V  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - --M------P  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - --M------T  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - --M------D  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - --M------A  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - --M------L  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - --M------K  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - --M------C  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - --M------D  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - --M------Q  
Aspergillus.nidulans.IME2 ---------- - --M------T  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - --M------E  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- - --M------V  
Species Residue at Site 16
in 'msaprobs'
muscle

The residue for every species at site 16 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------- - --M------S  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - --M------T  
Penicillium.marneffei.IME2 ---------- - --M------A  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - --M------S  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - --M------A  
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - --M------S  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - --M------A  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---------- - --M------P  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - --M------N  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - --M------A  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------- - --M------S  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - --M------S  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - --M------R  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - --M------E  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - --M------D  
Candida.parapsilosis.IME2 ---------- - --M------P  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - --M-------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------- - --M------S  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - --M------S  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - --M------S  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - --M------R  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - --M------A  
Species Residue at Site 16
in 'msaprobs'
muscle

The residue for every species at site 16 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - --M------D  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - --M------S  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - --M------S  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - --M------S  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - --M------A  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - --M------P  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - --E-------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- - --M------S  
Candida.orthopsilosis.IME2 ---------- - --M------S  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - --M------A  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - --M------A  
Debaryomyces.hansenii.IME2 ---------- - --M------M  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - --M------S  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - --M------G  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - --M------P  
Caenorhabditis.briggsae.CDK1 ---------- - --M------T  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - --M------T  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - --M------G  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - --M------D  
Monosiga.brevicollis.CDK1 ---------- - --M------A  
Saccharomyces.cerevisiae.SKY1 ---------- - --M------G  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - --M------A  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------- - --M------S  
Species Residue at Site 16
in 'msaprobs'
muscle

The residue for every species at site 16 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - --M------E  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - --M------C  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - --M------R  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - --M------K  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- - --M------E  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - --M------E  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - --M------G  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - --M------S  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - --M------S  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - --M------S  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- - --M------A  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------- - --M------S  
Saccharomyces.cerevisiae.CDK1 ---------- - --M------S  
Lodderomyces.elongisporus.IME2 ---------- - --M------S  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - --M------S  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - --M------P  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - --M------K  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - --M------K  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - --M------A  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - --M------R  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - ----------  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------- - --M------S  
Species Residue at Site 16
in 'msaprobs'
muscle

The residue for every species at site 16 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - --M------D  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - --M-------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - --M------A  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - --M------E  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - --M------E  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------- - --M------S  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - --M------L  
Aspergillus.fumigatus.IME2 ---------- - --M------T  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - --M------G  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - --M------N  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------- - --M------P  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------- - --M------A  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - --M------A  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - --M------K  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - --M------A  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - --M------T  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - --E------M  
Candida.glabrata.IME2 ---------- - --M------F  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- - --M------K  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - --M------N  
Species Residue at Site 16
in 'msaprobs'
muscle

The residue for every species at site 16 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - --M------A  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - --M------A  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - --M------N  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - --M------P  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - --M------N  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - --M------A  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - --M------N  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - --A-------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - --M------P  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - --M------H  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------- - --M------A  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - --M------S  
Lachancea.thermotolerans.SKY1 ---------- - --M------G  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - --M------A  
Dictyostelium.discoideum.CDK1 ---------- - --M------E  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - --M------S  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -----LKIIF L IGM------A Site 236
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - --M------S  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 16
in 'msaprobs'
muscle

The residue for every species at site 16 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - --M------E  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - --M------G  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - --M------S  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - --M------H  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------- - --M------S  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - --M------A  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - --M------M  
Encephalitozoon.cuniculi.CDK1 ---------- - --M-------  
Saccharomyces.kluyveri.IME2 ---------- - --M------V  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - --M------R  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - --M------A  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - --M------G  
Cryptococcus.neoformans.IME2 ---------- - --M------T  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - --M------S  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - --M------E  
Candida.lusitaniae.IME2 ---------- - --M------R  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---------- - --M------A  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - --M------D  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - --M------V  
Species Residue at Site 16
in 'msaprobs'
muscle

The residue for every species at site 16 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - --M------S  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------- - --M------A  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 ---------- - --M------L  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - --M------R  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - --M------A  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - --M------C  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - --M------A  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - --M------T  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - --M------A  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - --M------A  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------- - --M------A  
Acyrthosiphon.pisum.CDK1 ---------- - --M------Q  
Candida.tropicalis.CDK1 ---------- - --M------M  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - --M------D  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------- - --M------S  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - --M------T  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - --M------D  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - --M------I  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - --M------K  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - --R----AMN  
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- - --M------S  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - --M------G  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- - --M------S  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - --M------E  
Species Residue at Site 16
in 'msaprobs'
muscle

The residue for every species at site 16 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - --M------K  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - --M------S  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---------- - --M------A  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- - --M------G  
Candida.dubliniensis.IME2 ---------- - --M------S  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - --M------S  
Aspergillus.niger.IME2 ---------- - --M------T  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - --M------S  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - --M------C  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - --M------S  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - --M------N  
Schizosaccharomyces.japonicus.IME2 ---------- - --M------P  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - --M------E  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - --M------S  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - --M------S  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - --M------N  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - --M------S  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - --M------P  
Kluyveromyces.waltii.IME2 ---------- - --M------G  
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 ---------- - --M------V  
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 16
in 'msaprobs'
muscle

The residue for every species at site 16 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - --M------E  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - --M------P  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - --M------A  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - --M------E  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - --M------T  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - --M------S  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - --M------N  
Candida.albicans.IME2 ---------- - --M------S  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - --M------S  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - --M------S  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - --M------S  
Kluyveromyces.lactis.IME2 ---------- - --M------P  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------- - --M------A  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------- - --M------S  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - --M------S  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - --M------D  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - --M------S  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U FSALTPSPGR G SPM------E Site 600
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- - --M------V  
Neurospora.crassa.IME2 ---------- - --M------T  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - --M------T  
Species Residue at Site 16
in 'msaprobs'
muscle

The residue for every species at site 16 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - --M-------  
Hydra.magnipapillata.CDK1 ---------- - --MAVPNDMK  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - --M------A  
Ashbya.gossypii.IME2 ---------- - --M------K  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - --M------E  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - --M------G  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - --M------N  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - --M------N  
Schizosaccharomyces.pombe.b.IME2 ---------- - --M------S  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - --M------A  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---------- - --M------A  
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - --M------P  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - --M------E  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - --M------S  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 ---------- - --M------P  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - --M------Y  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - --M------D  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - --M------A  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - --M------N  
Species Residue at Site 16
in 'msaprobs'
muscle

The residue for every species at site 16 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - --M------N  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- - --M------S  
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 19:15, July 4th 2020
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