cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1373 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1373 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1373 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1373 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1373
in 'msaprobs'
muscle

The residue for every species at site 1373 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 GDGTFGSVHL A TRK------- Site 749
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD GWGHFSTVWL C NDK------- Site 749
Danio.rerio.CDK1 GEGTYGVVYK A KNK------- Site 749
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge GKGAYGIVCS A HNS------- Site 749
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d GEGTYGTVFK A KNR------- Site 749
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK GEGTYGTVFR G RDR------- Site 749
Candida.guilliermondii.IME2 GDGGFGIVRL A KYRHD----- Site 749
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ GSGSFGELFL A VNV------- Site 749
Chlamydomonas.reinhardtii.LF4 GEGTFSEVLK A QCI------- Site 749
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g GSGSFGVVIQ A KLV------- Site 749
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 GSGSFGDIYL G MSI------- Site 749
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 GEGSFGVLFE G TNM------- Site 749
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho GRGTYGHVYK A KRK------- Site 749
Schizosaccharomyces.octosporus.b.IME2 GDGSFGTVYL A KCK------- Site 749
Candida.albicans.MAPK3..Extracellular.signal.regul GEGAYGIVCS A IHK------- Site 749
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. GRGKYSEVFE G INM------- Site 749
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 GSGSFGEIYL G TNI------- Site 749
Suberites.domuncula.JNK..Stress.activated.protein. GSGAQGVVCS A FDT------- Site 749
Homo.sapiens.CLK3..Dual.specificity.protein.kinase GEGTFGKVVE C LDH------- Site 749
Aedes.aegypti.CDK1 GEGTYGVVYK G RNK------- Site 749
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci GEGAFGKVVE C IDH------- Site 749
Homo.sapiens.CLK2..Dual.specificity.protein.kinase GEGTFGRVVQ C VDH------- Site 749
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos GKGSFGQVAK C LDH------- Site 749
Homo.sapiens.HIPK1..Homeodomain.interacting.protei GRGTFGQVAK C WKR------- Site 749
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar GEGSYGVVFK C RNR------- Site 749
Species Residue at Site 1373
in 'msaprobs'
muscle

The residue for every species at site 1373 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 GEGTYGVVYK A KER------- Site 749
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. GRGKYSEVFE A INI------- Site 749
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM GEGAYGMVVS A DDT------- Site 749
Strongylocentrotus.purpuratus.CDK1 GEGTYGVVYK A RDL------- Site 749
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca GSGSFGEIYL A THV------- Site 749
Drosophila.melanogaster.CDK1 GEGTYGVVYK G RNR------- Site 749
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 GSGAFGEIYK G INL------- Site 749
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. GGGSFGEIYL G TNI------- Site 749
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH GWGQFSTVWL A YDT------- Site 749
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d GEGTYATVFK G RSK------- Site 749
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. GEGSYATVFK G FSS------- Site 749
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET GSGAQGIVCA G YDA------- Site 749
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 GEGSYGMVMK C RNK------- Site 749
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U GSGAQGIVCA G YDA------- Site 749
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. GSGAYGSVCS A IDK------- Site 749
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo GYGAFGVVWS V TDP------- Site 749
Bombus.terrestris.CDK1 GEGTYGVVYK A KDK------- Site 749
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 GWGHFSTVWL S WDI------- Site 749
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar GEGSYGVVSR C RNK------- Site 749
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. GSGAQGIVCA A FDA------- Site 749
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d GEGTYGQVYK A KDK------- Site 749
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. GEGTFSEVMK M QSL------- Site 749
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. GQGTFGTVQL A RDK------- Site 749
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G GQGTFGTVQL G KEK------- Site 749
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 GSGSFGDIYL G MSI------- Site 749
Species Residue at Site 1373
in 'msaprobs'
muscle

The residue for every species at site 1373 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 GSGSFGEIYL G TNI------- Site 749
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO GRGTFGQVVK C WKR------- Site 749
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C GRGKYSEVFE G INV------- Site 749
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl GYGAFGVVWS V TDP------- Site 749
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 GEGSYGVVFK C RNR------- Site 749
Homo.sapiens.HIPK3..Homeodomain.interacting.protei GRGTFGQVVK C WKR------- Site 749
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O EEGTYGVVYR A KDK------- Site 749
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d GEGAYGVVLK C RHK------- Site 749
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci GEGTFGRVVQ C VDH------- Site 749
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O EEGTYGVVYR A KDK------- Site 749
Naegleria.gruberi.LF4 GEGTFSKVLE A KNL------- Site 749
Saccharomyces.bayanus.IME2 GAGSFGCVTL A KAQFS----- Site 749
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. GRGKYSEVFE A INI------- Site 749
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a GTGAYGTVCY A LDR------- Site 749
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki GEGTYGVVSR A TVK------- Site 749
Dictyostelium.discoideum.DYRK1..Probable.serine.th GKGSFGQVVK A FDS------- Site 749
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos GKGSFGQVVK A YDH------- Site 749
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos GKGSFGQVVK A YDH------- Site 749
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d GEGAYGVVLK C RHK------- Site 749
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a GKGAYGIVWK A MDR------- Site 749
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific GRGGSSKVYQ V FDH------- Site 749
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos GKGSFGQVAK C LDH------- Site 749
Aspergillus.nidulans.IME2 GDGSFGSVAV A RVR------- Site 749
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi GEGTFSSVYL A TAQ------- Site 749
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se GYGAFGVVWS V TDP------- Site 749
Species Residue at Site 1373
in 'msaprobs'
muscle

The residue for every species at site 1373 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. GDGTYGSVLM G KSN------- Site 749
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep GEGTYGVVYK A RNK------- Site 749
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. GSGAQGIVCA A YDA------- Site 749
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. GHGSFGVVFQ A KCL------- Site 749
Penicillium.marneffei.IME2 GDGSFGSVVL A RTR------- Site 749
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen GSGAYGSVMS A FDG------- Site 749
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a GFGVNGLVLS A VDS------- Site 749
Drosophila.melanogaster.MAK GDGTYGTVVL G QRK------- Site 749
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH GKGMFSTVVS A LDR------- Site 749
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr GQGVFSNVVR A RDN------- Site 749
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de GEGTYGQVYK A KDK------- Site 749
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep GSGTYGMVYK A DDK------- Site 749
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d GEGTYGIVYR A RDT------- Site 749
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin GSGAQGIVCA A YDA------- Site 749
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a GSGAQGIVCA A FDT------- Site 749
Homo.sapiens.CLK1..Dual.specificity.protein.kinase GEGAFGKVVE C IDH------- Site 749
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis GEGTFSSVYL A TAQ------- Site 749
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 GSGSFGDIYL G MSI------- Site 749
Candida.parapsilosis.IME2 GNGSFGTVEL A RIKFP----- Site 749
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p SSGTYGKVYK A VSS------- Site 749
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen GNGSFGVVYQ A RLA------- Site 749
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. GSGAQGIVCA A FDT------- Site 749
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki GRGKYSEVFE A INI------- Site 749
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U GEGAFGKVVE C IDH------- Site 749
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a GFGVNGLVLS A TDS------- Site 749
Species Residue at Site 1373
in 'msaprobs'
muscle

The residue for every species at site 1373 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d GEGTYATVYK G KSK------- Site 749
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. GRGKYSEVFE A INI------- Site 749
Yarrowia.lipolytica.SSN3..Serine.threonine.protein AAGTYGRVYK A RSK------- Site 749
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. GSGAYGSVCS A IDL------- Site 749
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos GKGSFGQVVK A YDH------- Site 749
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE GRGKYSEVFE G FKM------- Site 749
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH GNGSFGVVFQ A SVV------- Site 749
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD GNGSFGVVTQ A IVA------- Site 749
Candida.orthopsilosis.IME2 GNGSFGTVEL A RIKFP----- Site 749
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot GEGQFATVYK A RDK------- Site 749
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str GSGAQGIVCA A TDM------- Site 749
Debaryomyces.hansenii.IME2 GNGSFGSVVL A KYKKD----- Site 749
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati GNGSFGVVFQ A TCL------- Site 749
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin AAGTYGKVYK A KAK------- Site 749
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE GEGTYGVVYK A VHV------- Site 749
Caenorhabditis.briggsae.CDK1 GEGTYGVVYK G RNR------- Site 749
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO GRGKYSEVFE A INI------- Site 749
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de GEGAHGIVFK A KHV------- Site 749
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos GKGSFGQVAR V YDH------- Site 749
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. GEGAYGKVFK A RDL------- Site 749
Monosiga.brevicollis.CDK1 GEGTYGVVYK G RNK------- Site 749
Saccharomyces.cerevisiae.SKY1 GWGHFSTVWL A KDM------- Site 749
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP GEGAYGVVCS A IHL------- Site 749
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U GEGSYGIVLK C RHR------- Site 749
Drosophila.melanogaster.GSK3..Protein.kinase.shagg GNGSFGVVFQ A KLC------- Site 749
Species Residue at Site 1373
in 'msaprobs'
muscle

The residue for every species at site 1373 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas GSGSFGDIYV A KDI------- Site 749
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. GQGAYGIVWK A VDR------- Site 749
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d GEGSYGMVMK C RNK------- Site 749
Dictyostelium.discoideum.CDK10..Probable.cyclin.de GEGTYGIVSK G RDK------- Site 749
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d GEGAYGVVLK C RHK------- Site 749
Ajellomyces.capsulatus.CDK1 GEGTYGVVYK A RDL------- Site 749
Dictystelium.discoideum.MAPK3..Extracellular.signa GHGAYGVVCS A KDN------- Site 749
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep GEGAYGKVFK A RDL------- Site 749
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep GEGTYGIVYR A RDT------- Site 749
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac GSGAQGIVCA A YDA------- Site 749
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. GSGAYGAVCS A IDK------- Site 749
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO GEGAYGTVYR A RDV------- Site 749
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri GYGAFGVVWS V TDP------- Site 749
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha GSGAQGIVCA A YDA------- Site 749
Saccharomyces.cerevisiae.CDK1 GEGTYGVVYK A LDL------- Site 749
Lodderomyces.elongisporus.IME2 GNGSFGSVEL A KIRFS----- Site 749
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen GSGAYGSVCS A FDA------- Site 749
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un GEGTFGRVVQ C VDH------- Site 749
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar GEGAYGVVLK C RHK------- Site 749
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. GNGSFGVVFR T KVK------- Site 749
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D GKGAYGIVWK A TDR------- Site 749
Homo.sapiens.CLK4..Dual.specificity.protein.kinase GEGAFGKVVE C IDH------- Site 749
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U GRGTFGQVVK C WKR------- Site 749
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d GEGSYGVVFK C RNR------- Site 749
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen GNGSFGVVYQ A RLA------- Site 749
Species Residue at Site 1373
in 'msaprobs'
muscle

The residue for every species at site 1373 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 GEGTYGVVYK G KNR------- Site 749
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep GVGAYGTVYK A RDP------- Site 749
Cryptococcus.neoformans.SSN3..Serine.threonine.pro SSGTYGRVYK A VLL------- Site 749
Salmo.salar.CDK1 GEGTYGVVYK A KNK------- Site 749
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d GEGQFATVYK A RDK------- Site 749
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d GEGAHGIVFK A KHV------- Site 749
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi GSGGSSKVFQ V LNE------- Site 749
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen GNGSFGVVYQ A KLC------- Site 749
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable NPGALGVNLV V EEM------- Site 749
Aspergillus.fumigatus.IME2 GDGSFGSVAV A RVR------- Site 749
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan GRGTYGHVYK A KRK------- Site 749
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha GEGTFGKVVQ C LDH------- Site 749
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha GSGAYGSVCS A IDK------- Site 749
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S GYGAFGVVWS V TDP------- Site 749
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma GRGTFGQVVK C WKR------- Site 749
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina GEGAYGMVSS A YDH------- Site 749
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d GEGTYATVYK G RSK------- Site 749
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. GEGTYGIVYR A RDT------- Site 749
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de GEGSYGVVFK C RNK------- Site 749
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S GSGAQGIVCA A YDT------- Site 749
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. GSGAYGTVCS S MDL------- Site 749
Candida.glabrata.IME2 GNGSFGSVTL A KYKIN----- Site 749
Homo.sapiens.MAK..Serine.threonine.protein.kinase. GDGTYGSVLM G KSN------- Site 749
Schizosaccharomyces.pombe.IME2 GDGTFGSVYL A TTK------- Site 749
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P GEGAYGIVCS A IHK------- Site 749
Species Residue at Site 1373
in 'msaprobs'
muscle

The residue for every species at site 1373 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl GEGTYGTVFK G RNR------- Site 749
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom GKGTFGEVAK G WRR------- Site 749
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. GSGSFGDIYL A INI------- Site 749
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d GEGTYATVFK G RSK------- Site 749
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d GEGSYGVVFK C RNK------- Site 749
Branchiostoma.floridae.CDK1 GEGTYGVVYK A KDK------- Site 749
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara GEGTFGRVVQ C MDH------- Site 749
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH GSGSFGVVMQ V HLI------- Site 749
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD GEGSYGTVHK A RNK------- Site 749
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR GNGSFGVVFL A KLS------- Site 749
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. GEGTYGIVYR A RDT------- Site 749
Homo.sapiens.ICK..Serine.threonine.protein.kinase. GDGTYGSVLL G RSI------- Site 749
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci GEGTFGKVVE C LDH------- Site 749
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos GKGSFGQVVK A YDR------- Site 749
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep GEGTYGVVYK A KNK------- Site 749
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act GNGAYGVVSS A RRR------- Site 749
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. GSGAYGSVCA A FDT------- Site 749
Lachancea.thermotolerans.SKY1 GWGHFSTVWL A KDT------- Site 749
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a GCGGNGLVFS A VDN------- Site 749
Dictyostelium.discoideum.CDK1 GEGTYGKVYK A KEK------- Site 749
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. GSGAYGAVCS A VDS------- Site 749
Xenopus.tropicalis.IME2 GEGTYGVVYK A RNR------- Site 749
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U GRGTFGQVAK C WKR------- Site 749
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. GRGKYSEVFE A INI------- Site 749
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d GEGTYGVVYK A RNR------- Site 749
Species Residue at Site 1373
in 'msaprobs'
muscle

The residue for every species at site 1373 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara GEGTYGVVYK A RNK------- Site 749
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. GEGSYAKVYK G ISR------- Site 749
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD GKGAYGIVWK A IDK------- Site 749
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos GKGSFGQVVK A YDR------- Site 749
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen GNGSFGVVYQ A KLC------- Site 749
Drosophila.melanogaster.GSK3H..Putative.glycogen.s GNGSFGVVFQ A KMV------- Site 749
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD GEGTYGIVYR A RDT------- Site 749
Encephalitozoon.cuniculi.CDK1 GEGTYGVVYK A RER------- Site 749
Saccharomyces.kluyveri.IME2 GNGSFGSVTL A KAKFN----- Site 749
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci GEGAFGKVVE C IDH------- Site 749
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a GEGAYGMVCS A YDN------- Site 749
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. GEGSYATVYK G ISR------- Site 749
Cryptococcus.neoformans.IME2 GDGSFGTVWL C DWHSP----- Site 749
Homo.sapiens.HIPK4..Homeodomain.interacting.protei GKGTFGEVAK G WRR------- Site 749
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote GWGHFSTVWL S WDI------- Site 749
Candida.lusitaniae.IME2 GYGSFGYALL A KYKKN----- Site 749
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom GRGTFGQVAK C WKR------- Site 749
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A GRGTYGHVYK A HRK------- Site 749
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep GEGAHGIVFK A KHI------- Site 749
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. GEGSYGVVFK C RNK------- Site 749
Gallus.gallus.CDK2 GEGTYGVVYK A RNK------- Site 749
Emericella.nidulans.CDK1 GEGTYGVVYK A REL------- Site 749
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. GEGTFSEVMK M QSL------- Site 749
Homo.sapiens.CDK1 GEGTYGVVYK G RHK------- Site 749
Candida.albicans.CDK1 GEGTYGVVYK A LDT------- Site 749
Species Residue at Site 1373
in 'msaprobs'
muscle

The residue for every species at site 1373 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca GRGKYSEVFE A INI------- Site 749
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a GNGAYGVVSS A RRR------- Site 749
Mus.musculus.ICK..Serine.threonine.protein.kinase. GDGTYGSVLL G RSI------- Site 749
Saccharomyces.castelli.IME2 GNGSFGCVTL A KAKF------ Site 749
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec GEGAFGKVVE C IDH------- Site 749
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep GEGQFATVYK A RDK------- Site 749
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. GEGSYATVYK G KSK------- Site 749
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly GNGSFGVVFQ A TCV------- Site 749
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS GEGTFSSVYK A KDI------- Site 749
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli GEGQFATVYK A RDK------- Site 749
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho GQGTFGEVFK A RHR------- Site 749
Homo.sapiens.HIPK2..Homeodomain.interacting.protei GRGTFGQVVK C WKR------- Site 749
Acyrthosiphon.pisum.CDK1 GEGTYGVVYK A LDK------- Site 749
Candida.tropicalis.CDK1 GNGSFGTVEL A KFKFQ----- Site 749
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin GRGTYGHVYK A KWK------- Site 749
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G GNGSFGVVYQ A RLL------- Site 749
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR GRGKYSEVFE A INI------- Site 749
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de GEGTYATVYK G KSK------- Site 749
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 GRGKYSEVFE G INV------- Site 749
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d GEGTYATVYK G RSK------- Site 749
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA GSGAYGSVCS A IDK------- Site 749
Candida.albicans.SSN3..Serine.threonine.protein.ki AAGTYGKVYK A KLK------- Site 749
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF GEGTFSEVLK A QCI------- Site 749
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA GNGSFGVVYQ A RMV------- Site 749
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara GTGAYGSVCS S INN------- Site 749
Species Residue at Site 1373
in 'msaprobs'
muscle

The residue for every species at site 1373 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de GEGTFGEVYK S QRR------- Site 749
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei GRGKYSEVFE A INI------- Site 749
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U GRGTFGQVVK C WRR------- Site 749
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d EEGTYGVVYR A KDK------- Site 749
Candida.dubliniensis.IME2 GNGSFGTVDL A KIKFF----- Site 749
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a GSGAQGIVCA A FDT------- Site 749
Aspergillus.niger.IME2 GDGSFGSVAV A RVR------- Site 749
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge GSGAYGSVCS S FDT------- Site 749
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d GEGSYGTVMK C KHK------- Site 749
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. GEGSYATVYK G KSK------- Site 749
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein GRGKYSEVFE A INI------- Site 749
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty GKGSFGQVTK A YDT------- Site 749
Schizosaccharomyces.japonicus.IME2 GDGTFGSVRL A RRR------- Site 749
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. GSGAQGIVCS A FDT------- Site 749
Gallus.gallus.CDK1 GEGTYGVVYK G RHK------- Site 749
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep GEGTYGTVFK A KNR------- Site 749
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P GNGSFGVVFQ T KLS------- Site 749
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE GKGAYGHVYR V RNM------- Site 749
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. GNGSFGVVFL A KLS------- Site 749
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. GSGAYGAVCS A VDG------- Site 749
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ GRGKYSEVFS G RCI------- Site 749
Kluyveromyces.waltii.IME2 GNGSFGTVTL A KLLSAQDGRK Site 749
Debaryomyces.hansenii.SKY1 GWGHFSTVWL A KDN------- Site 749
Saccharomyces.cerevisiae.IME2 GAGSFGCVTL A KAQF------ Site 749
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1373
in 'msaprobs'
muscle

The residue for every species at site 1373 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un GEGAYGKVFK A RDL------- Site 749
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein GRGKYSEVFE A INI------- Site 749
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a GCGGNGLVFS A VDN------- Site 749
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep GEGAYGKVFK A RDL------- Site 749
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST GHGSFGVVVT T VII------- Site 749
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk GSGAYGIVCS S LDT------- Site 749
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de GEGSYGTVMK C KHK------- Site 749
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act GSGAQGIVCS A YDH------- Site 749
Candida.albicans.IME2 GNGSFGTVDL A KIKFF----- Site 749
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d GVGAYGTVYK A RDL------- Site 749
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k NEGAFGVVYC A QDK------- Site 749
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. GSGAYGSVCA A FDT------- Site 749
Kluyveromyces.lactis.IME2 GKGSFGSVTL A ETMYD----- Site 749
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina GNGAYGVVSS A RRR------- Site 749
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. GSGAQGIVCA A YDA------- Site 749
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. GSGAYGSVCS A YDA------- Site 749
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 GSGSFGDIYL G MSI------- Site 749
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. GSGAYGSVCS A YDA------- Site 749
Amphimedon.queenslandica.CDK1 GEGTYGVVYK A RQA------- Site 749
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d GEGSYGVVFK C RNK------- Site 749
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U GEGTYGVVYK A RNK------- Site 749
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME EEGTYGVVYR A KDK------- Site 749
Neurospora.crassa.IME2 GDGSFGSVVL A RVR------- Site 749
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME GEGTYGTVFK G RNR------- Site 749
Dictyostelium.discoideum.DYRK2..Probable.serine.th GQGSFCQVVK G YDY------- Site 749
Species Residue at Site 1373
in 'msaprobs'
muscle

The residue for every species at site 1373 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep GVGAYGTVYK A RDP------- Site 749
Hydra.magnipapillata.CDK1 GEGTYGVVYK A KNK------- Site 749
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar GEGTYGIVYR A PDT------- Site 749
Ashbya.gossypii.IME2 GNGSFGSVTL A KAQFE----- Site 749
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi GSGGSSKVFQ V LNE------- Site 749
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos GKGSFGQVAR V YDH------- Site 749
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p GHGSFGVVFA T VIQ------- Site 749
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace GKGAYGIVWK A ADR------- Site 749
Schizosaccharomyces.pombe.b.IME2 GDGSFGTVYL A QRK------- Site 749
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a GEGAYGMVCS A YDN------- Site 749
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom GRGTFGQVVK C WKR------- Site 749
Schizosaccharomyces.pombe.CDK1 GEGTYGVVYK A RHK------- Site 749
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch GEGTFGRVMK C IDH------- Site 749
Saccoglossus.kowalevskii.CDK1 GEGTYGVVYK A RDK------- Site 749
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas GSGSFGDIYL G TDI------- Site 749
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac GSGAQGIVCA A YDA------- Site 749
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep GEGTYGVVYK A RNK------- Site 749
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable NPGALGVNLV V EEL------- Site 749
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep GEGTYGVVYK A KNR------- Site 749
Yarrowia.lipolytica.IME2 GKGSFGHVSL A RVRSK----- Site 749
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil AAGTYGKVYK A KRQ------- Site 749
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli GEGTYGVVYK A KNK------- Site 749
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K GEGTFSSVYK A QDL------- Site 749
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly GNGSFGVVFQ T KLS------- Site 749
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk GSGSFGVVMQ V HLI------- Site 749
Species Residue at Site 1373
in 'msaprobs'
muscle

The residue for every species at site 1373 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro GKGSFGQVTK A YDT------- Site 749
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo GYGAFGVVWS V TDP------- Site 749
Scheffersomyces.stipitis.SKY1 GWGHFSTVWL A RDN------- Site 749
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep GEGTYGTVFK A KNR------- Site 749

Generated by PhyloBot at 02:23, October 16th 2019
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