cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 1349 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1349 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1349 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1349 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1349
in 'msaprobs'
muscle

The residue for every species at site 1349 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 LKEVIKCTAI Y DVFS-V-V-- Site 726
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD YHPVRRNDVY G NRYQ-V-V-- Site 726
Danio.rerio.CDK1 ---------- M ESFQ-K-V-- Site 726
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge YNIFGNIFEV T AKYKPP-I-- Site 726
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- M QKYE-K-L-- Site 726
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -----RNSSK V GRYE-K-L-- Site 726
Candida.guilliermondii.IME2 PPPTIPLKSL E NDYK-M-I-- Site 726
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -------HVV G GKFK-L-G-- Site 726
Chlamydomonas.reinhardtii.LF4 ---------- M HKYR-L-V-- Site 726
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g VTDGTTGEKK T ISYE-P-C-- Site 605
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 LKESRPEIIV G GKYR-V-I-- Site 726
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 SQSRDDSTIV G LHYK-I-G-- Site 726
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho VKLSSERERV E DLFE-YEG-- Site 726
Schizosaccharomyces.octosporus.b.IME2 SSLNLKEFRF E DRYY-V-K-- Site 726
Candida.albicans.MAPK3..Extracellular.signal.regul -SPRQVSFNV S DHYQ-I-L-- Site 726
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. YESLNVQWGE Q DDYE-V-V-- Site 726
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 EKSSRSDRVV A GKWR-L-G-- Site 726
Suberites.domuncula.JNK..Stress.activated.protein. QRVGDTVFTV Q KRYT-N-L-- Site 726
Homo.sapiens.CLK3..Dual.specificity.protein.kinase HLVCRIGDWL Q ERYE-I-V-- Site 726
Aedes.aegypti.CDK1 ---------- M EDFQ-K-I-- Site 726
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci HLICQSGDVL S ARYE-I-V-- Site 726
Homo.sapiens.CLK2..Dual.specificity.protein.kinase HLIYHVGDWL Q ERYE-I-V-- Site 726
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos FYLKVLHDHI A YRYE-V-L-- Site 726
Homo.sapiens.HIPK1..Homeodomain.interacting.protei QHEI--LCSM T NSYE-V-L-- Site 726
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- M ERYE-K-L-- Site 726
Species Residue at Site 1349
in 'msaprobs'
muscle

The residue for every species at site 1349 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ----FICIPM S DSFQ-K-I-- Site 726
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. YEAHVPSWGN Q DDYQ-L-V-- Site 726
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM EVIRGQIFEV G PRYI-K-L-- Site 726
Strongylocentrotus.purpuratus.CDK1 ---------- M NNFE-K-I-- Site 726
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -------RIV G SKYK-L-G-- Site 726
Drosophila.melanogaster.CDK1 ---------- M EDFE-K-I-- Site 726
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - -----M-I--  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -------LRI G GKYR-I-S-- Site 726
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH HAVRVGDPFS G GRYI-A-Q-- Site 726
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -------FGK L ETYV-K-L-- Site 726
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. SYGGNSPFGR A DSYQ-K-L-- Site 726
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET VEVGDSTFTV L KRYQ-N-L-- Site 726
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- M EKYE-N-L-- Site 726
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U VEVGDSTFTV L KRYQ-N-L-- Site 726
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. QDVNKTAWEL P KTYV-S-P-- Site 726
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo HHQHSHHPQQ Q LDIE-P-D-- Site 728
Bombus.terrestris.CDK1 ---------- M DNFV-K-I-- Site 726
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 YHLVKIGDLF N GRYH-V-I-- Site 726
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar --------KV M EKYQ-V-L-- Site 726
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. FEIGDSTFTV L KRYQ-N-L-- Site 726
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d QTESDWGKRC V DKFD-I-I-- Site 726
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- M KNYK-A-I-- Site 726
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. DAADDRSYKE M EKYT-V-E-- Site 726
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G DAADERSRKE M DRFQ-V-E-- Site 726
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 LKESRPEIIV G GKYR-V-I-- Site 726
Species Residue at Site 1349
in 'msaprobs'
muscle

The residue for every species at site 1349 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -------PRV G NKFR-L-G-- Site 726
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO LVQHEVLYSL S AEYE-V-L-- Site 726
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C YESLIVQWGE Q DDYE-V-V-- Site 726
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl HHHQHSHHAQ Q LDIE-P-D-- Site 728
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- M EKYE-K-I-- Site 726
Homo.sapiens.HIPK3..Homeodomain.interacting.protei QHEV--LCSM K NTYE-V-L-- Site 726
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O YLPALQGCRS V EEFQ-C-L-- Site 726
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---IPDIGNV M NKFE-V-L-- Site 726
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci HLIYHVGDWL Q ERYE-I-V-- Site 726
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O YLPALQGCRS V EEFQ-C-L-- Site 726
Naegleria.gruberi.LF4 DQAQFERMLS Q RHYK-V-V-- Site 726
Saccharomyces.bayanus.IME2 PPLSIPLKTL S DRYQ-L-I-- Site 726
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. YEAHVPSWGN Q DDYQ-L-V-- Site 726
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a QEINKTIWEV P DRYK-D-L-- Site 726
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- M DKYN-I-E-- Site 726
Dictyostelium.discoideum.DYRK1..Probable.serine.th DYIVRIGEVF V DRFE-I-I-- Site 726
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos DYIVRSGERW L ERYE-I-D-- Site 726
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos SYVQVPHDHV A YRYE-V-L-- Site 726
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---IPNIGNV M NKFE-I-L-- Site 726
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---AEVDRHV A QRYL-I-K-- Site 726
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific AFSNESITIK G KQFF-I-F-- Site 726
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos SYMKVLHDHI A YRYE-V-L-- Site 726
Aspergillus.nidulans.IME2 GLTPTSMATL S DRFE-L-M-- Site 726
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi EELCEAVPQL V NVFK-I-K-- Site 726
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se AAAQPFYPPP V QDSQ-P-D-- Site 728
Species Residue at Site 1349
in 'msaprobs'
muscle

The residue for every species at site 1349 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- M NRYT-T-M-- Site 726
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- M ENFQ-K-V-- Site 726
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. VEVGDSTFTV L KRYQ-N-L-- Site 726
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. IGGRNGQPKQ T ISYM-A-E-- Site 726
Penicillium.marneffei.IME2 KGTSHSAMTL E DRFE-V-I-- Site 726
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen QELNKTIWEV P ERYQ-N-L-- Site 726
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a CIASVYGYDL G GRFV-D-F-- Site 726
Drosophila.melanogaster.MAK ---------- M NRYI-T-L-- Site 726
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH YYKVVLMEEL D SRYI-V-Q-- Site 726
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr YYRVNIGEVL D KRYN-V-Y-- Site 726
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de QTESDWGKRC V DKFD-I-I-- Site 726
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep VLTSTYRLDV Q EKYT-F-S-- Site 726
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d PEHRLGRCRS V KEFE-K-L-- Site 726
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin VEVGDSTFTV L KRYQ-N-L-- Site 726
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a VQVADSTFTV L KRYQ-Q-L-- Site 726
Homo.sapiens.CLK1..Dual.specificity.protein.kinase HLICQSGDVL S ARYE-I-V-- Site 726
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis EKLYEAVPQL S NVFK-I-E-- Site 726
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 LKESRPEIIV G GKYR-V-I-- Site 726
Candida.parapsilosis.IME2 PPKHVTVHSY Q QRYQ-I-I-- Site 726
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- K DGYK-I-I-- Site 726
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen TLGQGPERSQ E VAYT-D-I-- Site 726
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. VQVADSTFTV L KRYQ-Q-L-- Site 726
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki YESHVVEWGN Q DDYQ-L-V-- Site 726
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U HLICESGDVL R ARYE-I-V-- Site 726
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a CIASVYGYDL G GRFI-D-F-- Site 726
Species Residue at Site 1349
in 'msaprobs'
muscle

The residue for every species at site 1349 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -SLSEIGFGK L ETYI-K-L-- Site 726
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. YESHVVEWGN Q DDYQ-L-V-- Site 726
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ARKAKTKKRV L DKYE-I-I-- Site 726
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. EEVNKTLWEI P LRYA-S-L-- Site 726
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos DYIVRSGERW L ERYE-I-D-- Site 726
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE YEAHMIEWGQ I DDYQ-L-V-- Site 726
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------Q T ISYS-A-E-- Site 726
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD KFDKVIIKSN G VCYI-T-E-- Site 726
Candida.orthopsilosis.IME2 PPKHVTVHSY Q QRYQ-I-I-- Site 726
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -----DVKSR A KRYE-K-L-- Site 726
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str VPIGETQMVI L KRYE-N-L-- Site 726
Debaryomyces.hansenii.IME2 PPSGIPLKSF G DHYQ-A-I-- Site 726
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ASAGTGASRQ T YNYS-T-D-- Site 728
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin QRKDAGRVSV L EKYE-I-I-- Site 726
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE --DISPERDL S GRFR-A-F-- Site 726
Caenorhabditis.briggsae.CDK1 -IRKNDMNYT L DDFT-K-L-- Site 726
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO YENYVVDWGN Q DDYQ-L-V-- Site 726
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- M DQYC-I-L-- Site 726
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos AYIHVPRDHL A YRYE-V-L-- Site 726
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ----DGTNLA D QQYE-C-V-- Site 726
Monosiga.brevicollis.CDK1 ---------L H DDYV-K-I-- Site 726
Saccharomyces.cerevisiae.SKY1 HPAFKGEPYK D ARYI-L-V-- Site 726
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -GQRSISFNV S HHYQ-I-L-- Site 726
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- M EKYE-N-L-- Site 726
Drosophila.melanogaster.GSK3..Protein.kinase.shagg TPGQGTDRVQ E VSYT-D-T-- Site 726
Species Residue at Site 1349
in 'msaprobs'
muscle

The residue for every species at site 1349 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -------IRV A NKYA-L-G-- Site 726
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---TVVDPRI V RRYL-L-R-- Site 726
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- M EKYE-N-L-- Site 726
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------S V LSFE-K-L-- Site 726
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---IPNIGNV M NKFE-I-L-- Site 726
Ajellomyces.capsulatus.CDK1 ---------- M ENYQ-K-I-- Site 726
Dictystelium.discoideum.MAPK3..Extracellular.signa YFVYGSQFTV P RRYS-I-V-- Site 726
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ----DGLCRA D QQYE-C-V-- Site 726
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep PEHRLGRCRS V KEFE-K-L-- Site 726
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac VEIGDSTFTV L KRYQ-N-L-- Site 726
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. QDINKTAWEL P KTYL-A-P-- Site 726
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO SQAKKFGDGD P FNYQ-E-L-- Site 605
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri LSAPQCNGDG R GEPE-P-D-- Site 728
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha VEVGDSTFTV L KRYQ-N-L-- Site 726
Saccharomyces.cerevisiae.CDK1 ---------E L ANYK-R-L-- Site 726
Lodderomyces.elongisporus.IME2 SPKNLTVHSY N NHYQ-T-I-- Site 726
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen QEVNKTIWEV P VQYQ-N-L-- Site 726
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un HLIYHSGDWL Q ERYE-I-V-- Site 726
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---IPNIGNV M NKFE-I-L-- Site 726
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. KGHSNPRSQL L FHAV-T-P-- Site 728
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D RRIQELDQTV E SIFD-V-R-- Site 726
Homo.sapiens.CLK4..Dual.specificity.protein.kinase HLICQSGDVL R ARYE-I-V-- Site 726
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U QHEV--LCSM T NTYE-V-L-- Site 726
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- M EKYE-K-I-- Site 726
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen TVGQGPERSQ E VAYT-D-I-- Site 726
Species Residue at Site 1349
in 'msaprobs'
muscle

The residue for every species at site 1349 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -AHEGDSVYT L NDFT-K-L-- Site 726
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------A T SRYE-P-V-- Site 726
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ARRDKERRGV L KTYK-I-L-- Site 726
Salmo.salar.CDK1 ---------- M ESFQ-K-V-- Site 726
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -----DVRSR A KQYE-K-L-- Site 726
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- M DQYC-I-L-- Site 726
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi SSANECISVK G RIYS-I-L-- Site 726
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen TPGQGPDRPQ E VSYT-D-T-- Site 726
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ERGPGSPGEP M EKYQ-V-L-- Site 726
Aspergillus.fumigatus.IME2 VPATTSMATL E DRFE-V-I-- Site 726
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan VKLTGERERV E DLFE-YEG-- Site 726
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ---E-I-I--  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha QELNRTIWEL P RRYT-S-L-- Site 726
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S AAAQPFYQPP V QDSQ-P-D-- Site 728
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma QHEV--LCSM T NTYE-V-L-- Site 726
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina EMVKGQPFDV G PRYT-Q-L-- Site 726
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -------FGK M ETYI-K-L-- Site 726
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. PEHRLGRCRS V KEFE-K-L-- Site 726
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- M EKYE-K-I-- Site 726
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S VEVGDTNFTI H SRYI-N-L-- Site 726
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. IEINKMVWEV P KRYS-Q-L-- Site 726
Candida.glabrata.IME2 PPSTIPLKSM H ENYE-I-L-- Site 726
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- M NRYT-T-M-- Site 726
Schizosaccharomyces.pombe.IME2 TKEVRKCISI D EVYN-V-V-- Site 726
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P APARQISFNV S SHYQ-I-L-- Site 726
Species Residue at Site 1349
in 'msaprobs'
muscle

The residue for every species at site 1349 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- M QKYE-K-L-- Site 726
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---T--IQSE T DCYD-I-I-- Site 726
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. SSGSKAEFIV G GKYK-L-V-- Site 726
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -------FGK L ETYV-K-L-- Site 726
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- M EKYE-K-L-- Site 726
Branchiostoma.floridae.CDK1 ---------- M DNFQ-K-I-- Site 726
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara HLIYRVGDWL Q ERYE-I-L-- Site 726
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ARDGSTGEVK Q LSYT-S-S-- Site 726
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -VGRPAREDV L EKYE-M-M-- Site 726
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR VATDGVDQQV E ISYY-D-Q-- Site 606
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. AADRLGRCRS V KEFE-K-L-- Site 726
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- M NRYT-T-I-- Site 726
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci HLVCRIGDWL Q ERYE-I-V-- Site 726
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos DYIVKNGEKW M DRYE-I-D-- Site 726
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- M ENFQ-K-V-- Site 726
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ARSFDVTFDV G DEYE-I-I-- Site 726
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. QELNKTIWEV P ERYQ-N-L-- Site 726
Lachancea.thermotolerans.SKY1 HPAFRGETYN E GRYM-V-V-- Site 726
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a SLMNIHGFDL G SRYM-D-L-- Site 726
Dictyostelium.discoideum.CDK1 -------DGG L SRYQ-K-L-- Site 726
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. QEVTKTAWEV R AVYQ-D-L-- Site 726
Xenopus.tropicalis.IME2 ---------- M ENFQ-K-V-- Site 726
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U QHEI--LCSM T NSYE-V-L-- Site 726
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. YESHVVEWGN Q DDYQ-L-V-- Site 726
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- M ENFQ-K-V-- Site 726
Species Residue at Site 1349
in 'msaprobs'
muscle

The residue for every species at site 1349 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara --------AF Q QVFQ-K-V-- Site 726
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. PWKKSLPFGA A SSYL-N-L-- Site 726
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---EDIDKHV L RKYE-V-L-- Site 726
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos DYIVKNGEKW M DRYE-I-D-- Site 726
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen TPGQGPDRPQ E VSYT-D-T-- Site 726
Drosophila.melanogaster.GSK3H..Putative.glycogen.s TNAFGADVMS E ISYT-D-A-- Site 726
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ERLKMGRCRP V TEFE-K-L-- Site 726
Encephalitozoon.cuniculi.CDK1 ---------- T ESFQ-K-L-- Site 726
Saccharomyces.kluyveri.IME2 PPFYIPLKNI S DRYE-L-V-- Site 726
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci HLICQSGDVL R ARYE-I-V-- Site 726
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a EMVRGQVFDV G PRYT-N-L-- Site 726
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. QWRKSLPFGA A SSYL-N-L-- Site 726
Cryptococcus.neoformans.IME2 GRVGVEDPRA D RVYT-E-L-- Site 726
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---T--IQSE T DCYD-I-I-- Site 726
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote YHLVKIGDLF N GRYH-V-I-- Site 726
Candida.lusitaniae.IME2 GISPIQIDSF Q KNYY-M-I-- Site 726
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom QHEI--LCSM T NSYE-V-L-- Site 726
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A MKTQQERAKV E DLFE-YEG-- Site 604
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- M DQYS-I-L-- Site 726
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------E M EKFE-K-L-- Site 726
Gallus.gallus.CDK2 ---------- M ENFQ-K-V-- Site 726
Emericella.nidulans.CDK1 ---------- M ENYQ-K-I-- Site 726
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- M KNYK-A-I-- Site 726
Homo.sapiens.CDK1 ---------- M EDYT-K-I-- Site 726
Candida.albicans.CDK1 ---------- L SDYQ-R-Q-- Site 726
Species Residue at Site 1349
in 'msaprobs'
muscle

The residue for every species at site 1349 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca YESHVVDWGN Q DDYQ-L-V-- Site 726
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ARSFDVTFDV G DEYE-I-I-- Site 726
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- M NRYT-T-I-- Site 726
Saccharomyces.castelli.IME2 PPKNIPLKSL Y DRYQ-L-I-- Site 726
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec HLIYHRRDML R ARYE-I-V-- Site 726
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -----DVKSR A KRYE-K-L-- Site 726
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. SSPTSPKFGK A DSYE-K-L-- Site 726
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly TGVPSNASAP R KSYE-T-V-- Site 726
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS IQLYHDLPGI E NEYK-L-I-- Site 726
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -----DVKSR A KLYE-K-L-- Site 726
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho DSVECPFCDE V SKYE-K-L-- Site 726
Homo.sapiens.HIPK2..Homeodomain.interacting.protei QHEV--LCSM T NTYE-V-L-- Site 726
Acyrthosiphon.pisum.CDK1 KEGPTKNVSI N VNYD-K-L-- Site 726
Candida.tropicalis.CDK1 PPKNLTVHSY Q RSYQ-T-I-- Site 726
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin MKTQIERTKV E DLFN-YEG-- Site 726
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G TVGKPPDRQQ E INYC-E-V-- Site 726
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR YESYVVDWGN Q EDYQ-L-V-- Site 726
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -SLSEIGFGK L ETYI-K-L-- Site 726
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 YESLIVQWGE Q DDYE-V-V-- Site 726
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -------FGK M ETYI-K-L-- Site 726
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA QELNRTVWEL P RRYI-S-L-- Site 726
Candida.albicans.SSN3..Serine.threonine.protein.ki HRKDLTRESV L STYQ-I-M-- Site 726
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF AATVTPNSPR I AQYR-L-V-- Site 726
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA TEGPPPDRTK E ISYT-D-T-- Site 726
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara EEINSTVWEV P AKYV-C-L-- Site 726
Species Residue at Site 1349
in 'msaprobs'
muscle

The residue for every species at site 1349 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de PKLHFVGCSH L TDYH-L-M-- Site 726
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei YESHVVEWGN Q DDYQ-L-V-- Site 726
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U LHEV--LCSV K NTYE-V-L-- Site 726
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d YLPALQGCRS V EEFQ-C-L-- Site 726
Candida.dubliniensis.IME2 PPKHLTVHSY H SKYQ-T-I-- Site 726
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a VQVADSTFTV L KRYQ-Q-L-- Site 726
Aspergillus.niger.IME2 GAAPTSVASL E DRFE-V-L-- Site 726
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge QELNKTLWEV P DRYQ-N-L-- Site 726
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- M EMYE-T-L-- Site 726
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. SSPTSPKFGK A DSYE-K-L-- Site 726
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein YESHVVEWGN Q DDYQ-L-V-- Site 726
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty DYILKNGEIF D KRYV-I-LSD Site 726
Schizosaccharomyces.japonicus.IME2 EKSVTTCTKL E DMYD-V-F-- Site 726
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. VTIGEAQMVV L KRYQ-N-L-- Site 726
Gallus.gallus.CDK1 ---------- M EDYT-K-I-- Site 726
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- M QKYE-K-L-- Site 726
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P VQDGVTGETR E LQYT-Q-C-- Site 726
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE CGGPRPAALT L KDFK-V-G-- Site 726
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. VATDGVDQQV E ISYY-D-Q-- Site 606
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. QEVTKTAWEV R AVYR-D-L-- Site 726
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ EQGVTIDWGK I SNYE-I-I-- Site 726
Kluyveromyces.waltii.IME2 PPFYIPVKPI A NRYA-L-M-- Site 726
Debaryomyces.hansenii.SKY1 HTCYIGENYK S NKYT-L-V-- Site 726
Saccharomyces.cerevisiae.IME2 PPLSIPLKTL S DRYQ-L-I-- Site 726
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1349
in 'msaprobs'
muscle

The residue for every species at site 1349 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ------DSLA D QQYE-C-V-- Site 726
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein YEAHVPSWGN Q DDYQ-L-V-- Site 726
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a SLMNIHGFDL G SRYM-D-L-- Site 726
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ----DSLSRA D QQYE-C-V-- Site 726
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST VDRKNHGGTI D ISYP-T-T-- Site 726
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk QEVNKTVWEV K ERYR-E-L-- Site 726
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- M EMYE-T-L-- Site 726
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act IDVGDSTFTV L KRYQ-N-L-- Site 726
Candida.albicans.IME2 PPKHLTVHSY H SKYQ-T-I-- Site 726
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d --------EM K GQYE-P-V-- Site 726
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k LRSPYSACRS V DCFK-K-L-- Site 726
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. QELNKTIWEV P ERYQ-N-L-- Site 726
Kluyveromyces.lactis.IME2 PPFYIPLKNI D ARYN-V-I-- Site 726
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ARSFDVTFDV G DEYE-I-I-- Site 726
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. VEVGDSTFTV L KRYQ-N-L-- Site 726
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. QELNKTVWEV P QRLQ-G-L-- Site 726
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 LKESRPEIIV G GKYR-V-I-- Site 726
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. QELNKTVWEV P QRLQ-G-L-- Site 726
Amphimedon.queenslandica.CDK1 ---------- M DGYE-R-L-- Site 726
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- M EKYE-K-L-- Site 726
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U --------AI Q ASFQ-K-V-- Site 726
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME YYPGVQGCRS V EEFQ-C-L-- Site 726
Neurospora.crassa.IME2 SHGIGSGQAL E DRFE-V-L-- Site 726
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- M QKYD-K-M-- Site 726
Dictyostelium.discoideum.DYRK2..Probable.serine.th EYKVVERDHI A YRFE-I-V-- Site 726
Species Residue at Site 1349
in 'msaprobs'
muscle

The residue for every species at site 1349 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------A A TRYE-P-V-- Site 726
Hydra.magnipapillata.CDK1 --------SI M DIFQ-K-L-- Site 726
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ASERLGKCRS V KEFE-K-L-- Site 726
Ashbya.gossypii.IME2 PPFYIPLKPV E GRYK-L-I-- Site 726
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi SSINECISVN G RIYS-I-L-- Site 726
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos AYIHVPRDHL A YRYE-V-L-- Site 726
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p PPTIDPNDPV Q ISFP-T-T-- Site 726
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---TEVEEHI S SKYE-I-K-- Site 726
Schizosaccharomyces.pombe.b.IME2 SVLDLTQVIF E DRYL-V-K-- Site 726
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a EMVRGQVFDV G PRYT-N-L-- Site 726
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom QHEV--LCSM K NTYE-V-L-- Site 726
Schizosaccharomyces.pombe.CDK1 ---------- M ENYQ-K-V-- Site 726
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch HLICRSGDVL Q ERYE-I-V-- Site 726
Saccoglossus.kowalevskii.CDK1 ---------- M ENFQ-K-I-- Site 726
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -------LRV G NRYR-L-G-- Site 726
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac VEIGDSTFTV L KRYQ-N-L-- Site 726
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- M DVFQ-K-V-- Site 726
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- M DMFQ-K-V-- Site 726
Yarrowia.lipolytica.IME2 DRRSLTVKSL D DRYV-L-L-- Site 726
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ARKDRMRVSV L EKYE-V-I-- Site 726
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- M ESFQ-K-V-- Site 726
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K DDLYDKVPQL S SRYK-L-L-- Site 726
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly VQDGVTGETR E IQYT-Q-C-- Site 726
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ARDGSTGEVK Q LSYT-S-S-- Site 726
Species Residue at Site 1349
in 'msaprobs'
muscle

The residue for every species at site 1349 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro DYILKNGEIF D KRYV-I-LSD Site 726
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo HHQHSHHPQQ Q LDIE-P-D-- Site 728
Scheffersomyces.stipitis.SKY1 HTCYIGENYK N GKYT-L-V-- Site 726
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- M QKYE-K-L-- Site 726

Generated by PhyloBot at 15:39, October 23rd 2019
Questions/Comments? help@phylobot.com