cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1348 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1348 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1348 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1348 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1348
in 'msaprobs'
muscle

The residue for every species at site 1348 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 SLKEVIKCTA I YDVFS-V-V- Site 606
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD GYHPVRRNDV Y GNRYQ-V-V- Site 725
Danio.rerio.CDK1 ---------- - MESFQ-K-V-  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge QYNIFGNIFE V TAKYKPP-I- Site 725
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - MQKYE-K-L-  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ------RNSS K VGRYE-K-L- Site 606
Candida.guilliermondii.IME2 KPPPTIPLKS L ENDYK-M-I- Site 725
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ --------HV V GGKFK-L-G- Site 606
Chlamydomonas.reinhardtii.LF4 ---------- - MHKYR-L-V-  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g VVTDGTTGEK K TISYE-P-C- Site 604
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ILKESRPEII V GGKYR-V-I- Site 606
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 GSQSRDDSTI V GLHYK-I-G- Site 725
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho KVKLSSERER V EDLFE-YEG- Site 606
Schizosaccharomyces.octosporus.b.IME2 FSSLNLKEFR F EDRYY-V-K- Site 725
Candida.albicans.MAPK3..Extracellular.signal.regul --SPRQVSFN V SDHYQ-I-L- Site 725
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. DYESLNVQWG E QDDYE-V-V- Site 725
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 GEKSSRSDRV V AGKWR-L-G- Site 725
Suberites.domuncula.JNK..Stress.activated.protein. SQRVGDTVFT V QKRYT-N-L- Site 725
Homo.sapiens.CLK3..Dual.specificity.protein.kinase GHLVCRIGDW L QERYE-I-V- Site 725
Aedes.aegypti.CDK1 ---------- - MEDFQ-K-I-  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci GHLICQSGDV L SARYE-I-V- Site 725
Homo.sapiens.CLK2..Dual.specificity.protein.kinase GHLIYHVGDW L QERYE-I-V- Site 725
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos GFYLKVLHDH I AYRYE-V-L- Site 725
Homo.sapiens.HIPK1..Homeodomain.interacting.protei VQHEI--LCS M TNSYE-V-L- Site 725
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - MERYE-K-L-  
Species Residue at Site 1348
in 'msaprobs'
muscle

The residue for every species at site 1348 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -----FICIP M SDSFQ-K-I- Site 606
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. DYEAHVPSWG N QDDYQ-L-V- Site 725
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM AEVIRGQIFE V GPRYI-K-L- Site 725
Strongylocentrotus.purpuratus.CDK1 ---------- - MNNFE-K-I-  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca --------RI V GSKYK-L-G- Site 606
Drosophila.melanogaster.CDK1 ---------- - MEDFE-K-I-  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ------M-I-  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. --------LR I GGKYR-I-S- Site 606
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH YHAVRVGDPF S GGRYI-A-Q- Site 725
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d --------FG K LETYV-K-L- Site 725
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. SSYGGNSPFG R ADSYQ-K-L- Site 725
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET SVEVGDSTFT V LKRYQ-N-L- Site 725
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - MEKYE-N-L-  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U SVEVGDSTFT V LKRYQ-N-L- Site 725
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. KQDVNKTAWE L PKTYV-S-P- Site 725
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo HHHQHSHHPQ Q QLDIE-P-D- Site 727
Bombus.terrestris.CDK1 ---------- - MDNFV-K-I-  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 GYHLVKIGDL F NGRYH-V-I- Site 724
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------K V MEKYQ-V-L- Site 725
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. VFEIGDSTFT V LKRYQ-N-L- Site 725
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d RQTESDWGKR C VDKFD-I-I- Site 725
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - MKNYK-A-I-  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. TDAADDRSYK E MEKYT-V-E- Site 602
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ADAADERSRK E MDRFQ-V-E- Site 606
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ILKESRPEII V GGKYR-V-I- Site 606
Species Residue at Site 1348
in 'msaprobs'
muscle

The residue for every species at site 1348 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 --------PR V GNKFR-L-G- Site 606
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO QLVQHEVLYS L SAEYE-V-L- Site 725
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C DYESLIVQWG E QDDYE-V-V- Site 725
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl AHHHQHSHHA Q QLDIE-P-D- Site 727
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - MEKYE-K-I-  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei VQHEV--LCS M KNTYE-V-L- Site 725
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O KYLPALQGCR S VEEFQ-C-L- Site 725
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ----IPDIGN V MNKFE-V-L- Site 606
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci GHLIYHVGDW L QERYE-I-V- Site 725
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O KYLPALQGCR S VEEFQ-C-L- Site 725
Naegleria.gruberi.LF4 FDQAQFERML S QRHYK-V-V- Site 725
Saccharomyces.bayanus.IME2 NPPLSIPLKT L SDRYQ-L-I- Site 725
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. DYEAHVPSWG N QDDYQ-L-V- Site 725
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a RQEINKTIWE V PDRYK-D-L- Site 725
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - MDKYN-I-E-  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ADYIVRIGEV F VDRFE-I-I- Site 725
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos HDYIVRSGER W LERYE-I-D- Site 725
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos GSYVQVPHDH V AYRYE-V-L- Site 725
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ----IPNIGN V MNKFE-I-L- Site 606
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ----AEVDRH V AQRYL-I-K- Site 725
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific SAFSNESITI K GKQFF-I-F- Site 725
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos GSYMKVLHDH I AYRYE-V-L- Site 725
Aspergillus.nidulans.IME2 RGLTPTSMAT L SDRFE-L-M- Site 725
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi IEELCEAVPQ L VNVFK-I-K- Site 725
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se LAAAQPFYPP P VQDSQ-P-D- Site 727
Species Residue at Site 1348
in 'msaprobs'
muscle

The residue for every species at site 1348 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - MNRYT-T-M-  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - MENFQ-K-V-  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. SVEVGDSTFT V LKRYQ-N-L- Site 725
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. TIGGRNGQPK Q TISYM-A-E- Site 725
Penicillium.marneffei.IME2 LKGTSHSAMT L EDRFE-V-I- Site 725
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen RQELNKTIWE V PERYQ-N-L- Site 725
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a DCIASVYGYD L GGRFV-D-F- Site 725
Drosophila.melanogaster.MAK ---------- - MNRYI-T-L-  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH GYYKVVLMEE L DSRYI-V-Q- Site 725
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr GYYRVNIGEV L DKRYN-V-Y- Site 725
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de RQTESDWGKR C VDKFD-I-I- Site 725
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep IVLTSTYRLD V QEKYT-F-S- Site 725
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d PPEHRLGRCR S VKEFE-K-L- Site 725
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin SVEVGDSTFT V LKRYQ-N-L- Site 725
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a SVQVADSTFT V LKRYQ-Q-L- Site 725
Homo.sapiens.CLK1..Dual.specificity.protein.kinase GHLICQSGDV L SARYE-I-V- Site 725
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis IEKLYEAVPQ L SNVFK-I-E- Site 725
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ILKESRPEII V GGKYR-V-I- Site 606
Candida.parapsilosis.IME2 SPPKHVTVHS Y QQRYQ-I-I- Site 606
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - KDGYK-I-I-  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ATLGQGPERS Q EVAYT-D-I- Site 606
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. SVQVADSTFT V LKRYQ-Q-L- Site 725
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki DYESHVVEWG N QDDYQ-L-V- Site 725
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U GHLICESGDV L RARYE-I-V- Site 725
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a DCIASVYGYD L GGRFI-D-F- Site 725
Species Residue at Site 1348
in 'msaprobs'
muscle

The residue for every species at site 1348 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d --SLSEIGFG K LETYI-K-L- Site 725
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. DYESHVVEWG N QDDYQ-L-V- Site 725
Yarrowia.lipolytica.SSN3..Serine.threonine.protein TARKAKTKKR V LDKYE-I-I- Site 725
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. KEEVNKTLWE I PLRYA-S-L- Site 725
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos HDYIVRSGER W LERYE-I-D- Site 725
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE DYEAHMIEWG Q IDDYQ-L-V- Site 725
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- Q TISYS-A-E- Site 725
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD NKFDKVIIKS N GVCYI-T-E- Site 725
Candida.orthopsilosis.IME2 SPPKHVTVHS Y QQRYQ-I-I- Site 606
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ------DVKS R AKRYE-K-L- Site 606
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str VVPIGETQMV I LKRYE-N-L- Site 725
Debaryomyces.hansenii.IME2 NPPSGIPLKS F GDHYQ-A-I- Site 606
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati SASAGTGASR Q TYNYS-T-D- Site 727
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin RQRKDAGRVS V LEKYE-I-I- Site 725
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---DISPERD L SGRFR-A-F- Site 606
Caenorhabditis.briggsae.CDK1 --IRKNDMNY T LDDFT-K-L- Site 602
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO DYENYVVDWG N QDDYQ-L-V- Site 725
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - MDQYC-I-L-  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos GAYIHVPRDH L AYRYE-V-L- Site 725
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -----DGTNL A DQQYE-C-V- Site 606
Monosiga.brevicollis.CDK1 ---------- L HDDYV-K-I- Site 606
Saccharomyces.cerevisiae.SKY1 YHPAFKGEPY K DARYI-L-V- Site 725
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP --GQRSISFN V SHHYQ-I-L- Site 725
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - MEKYE-N-L-  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ATPGQGTDRV Q EVSYT-D-T- Site 606
Species Residue at Site 1348
in 'msaprobs'
muscle

The residue for every species at site 1348 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas --------IR V ANKYA-L-G- Site 725
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ----TVVDPR I VRRYL-L-R- Site 606
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - MEKYE-N-L-  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- S VLSFE-K-L- Site 606
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ----IPNIGN V MNKFE-I-L- Site 606
Ajellomyces.capsulatus.CDK1 ---------- - MENYQ-K-I-  
Dictystelium.discoideum.MAPK3..Extracellular.signa SYFVYGSQFT V PRRYS-I-V- Site 725
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -----DGLCR A DQQYE-C-V- Site 606
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep PPEHRLGRCR S VKEFE-K-L- Site 725
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac SVEIGDSTFT V LKRYQ-N-L- Site 725
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. KQDINKTAWE L PKTYL-A-P- Site 725
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO MSQAKKFGDG D PFNYQ-E-L- Site 604
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ALSAPQCNGD G RGEPE-P-D- Site 727
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha SVEVGDSTFT V LKRYQ-N-L- Site 725
Saccharomyces.cerevisiae.CDK1 ---------- E LANYK-R-L- Site 606
Lodderomyces.elongisporus.IME2 QSPKNLTVHS Y NNHYQ-T-I- Site 725
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen RQEVNKTIWE V PVQYQ-N-L- Site 725
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un GHLIYHSGDW L QERYE-I-V- Site 725
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ----IPNIGN V MNKFE-I-L- Site 606
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. VKGHSNPRSQ L LFHAV-T-P- Site 727
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ERRIQELDQT V ESIFD-V-R- Site 606
Homo.sapiens.CLK4..Dual.specificity.protein.kinase GHLICQSGDV L RARYE-I-V- Site 725
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U VQHEV--LCS M TNTYE-V-L- Site 725
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - MEKYE-K-I-  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ATVGQGPERS Q EVAYT-D-I- Site 606
Species Residue at Site 1348
in 'msaprobs'
muscle

The residue for every species at site 1348 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 --AHEGDSVY T LNDFT-K-L- Site 725
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- A TSRYE-P-V- Site 725
Cryptococcus.neoformans.SSN3..Serine.threonine.pro RARRDKERRG V LKTYK-I-L- Site 725
Salmo.salar.CDK1 ---------- - MESFQ-K-V-  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ------DVRS R AKQYE-K-L- Site 606
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - MDQYC-I-L-  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi SSSANECISV K GRIYS-I-L- Site 725
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ATPGQGPDRP Q EVSYT-D-T- Site 606
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable GERGPGSPGE P MEKYQ-V-L- Site 725
Aspergillus.fumigatus.IME2 RVPATTSMAT L EDRFE-V-I- Site 606
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan KVKLTGERER V EDLFE-YEG- Site 606
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----E-I-I-  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha RQELNRTIWE L PRRYT-S-L- Site 725
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S LAAAQPFYQP P VQDSQ-P-D- Site 727
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma VQHEV--LCS M TNTYE-V-L- Site 725
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina VEMVKGQPFD V GPRYT-Q-L- Site 725
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d --------FG K METYI-K-L- Site 725
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. PPEHRLGRCR S VKEFE-K-L- Site 725
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - MEKYE-K-I-  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S TVEVGDTNFT I HSRYI-N-L- Site 725
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. RIEINKMVWE V PKRYS-Q-L- Site 725
Candida.glabrata.IME2 SPPSTIPLKS M HENYE-I-L- Site 606
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - MNRYT-T-M-  
Schizosaccharomyces.pombe.IME2 YTKEVRKCIS I DEVYN-V-V- Site 725
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P QAPARQISFN V SSHYQ-I-L- Site 725
Species Residue at Site 1348
in 'msaprobs'
muscle

The residue for every species at site 1348 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - MQKYE-K-L-  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ----T--IQS E TDCYD-I-I- Site 606
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -SSGSKAEFI V GGKYK-L-V- Site 606
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d --------FG K LETYV-K-L- Site 725
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - MEKYE-K-L-  
Branchiostoma.floridae.CDK1 ---------- - MDNFQ-K-I-  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara GHLIYRVGDW L QERYE-I-L- Site 725
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH TARDGSTGEV K QLSYT-S-S- Site 606
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD --VGRPARED V LEKYE-M-M- Site 606
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR SVATDGVDQQ V EISYY-D-Q- Site 605
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. PAADRLGRCR S VKEFE-K-L- Site 725
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - MNRYT-T-I-  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci GHLVCRIGDW L QERYE-I-V- Site 725
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos YDYIVKNGEK W MDRYE-I-D- Site 725
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - MENFQ-K-V-  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act KARSFDVTFD V GDEYE-I-I- Site 725
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. RQELNKTIWE V PERYQ-N-L- Site 725
Lachancea.thermotolerans.SKY1 YHPAFRGETY N EGRYM-V-V- Site 725
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ESLMNIHGFD L GSRYM-D-L- Site 725
Dictyostelium.discoideum.CDK1 --------DG G LSRYQ-K-L- Site 606
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. RQEVTKTAWE V RAVYQ-D-L- Site 725
Xenopus.tropicalis.IME2 ---------- - MENFQ-K-V-  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U VQHEI--LCS M TNSYE-V-L- Site 725
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. DYESHVVEWG N QDDYQ-L-V- Site 725
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - MENFQ-K-V-  
Species Residue at Site 1348
in 'msaprobs'
muscle

The residue for every species at site 1348 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------A F QQVFQ-K-V- Site 606
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. LPWKKSLPFG A ASSYL-N-L- Site 725
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ----EDIDKH V LRKYE-V-L- Site 725
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos YDYIVKNGEK W MDRYE-I-D- Site 725
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ATPGQGPDRP Q EVSYT-D-T- Site 606
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ATNAFGADVM S EISYT-D-A- Site 606
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD PERLKMGRCR P VTEFE-K-L- Site 725
Encephalitozoon.cuniculi.CDK1 ---------- - TESFQ-K-L-  
Saccharomyces.kluyveri.IME2 NPPFYIPLKN I SDRYE-L-V- Site 606
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci GHLICQSGDV L RARYE-I-V- Site 725
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a PEMVRGQVFD V GPRYT-N-L- Site 725
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. FQWRKSLPFG A ASSYL-N-L- Site 725
Cryptococcus.neoformans.IME2 DGRVGVEDPR A DRVYT-E-L- Site 725
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ----T--IQS E TDCYD-I-I- Site 606
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote GYHLVKIGDL F NGRYH-V-I- Site 724
Candida.lusitaniae.IME2 QGISPIQIDS F QKNYY-M-I- Site 725
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom VQHEI--LCS M TNSYE-V-L- Site 725
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A KMKTQQERAK V EDLFE-YEG- Site 603
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - MDQYS-I-L-  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- E MEKFE-K-L- Site 725
Gallus.gallus.CDK2 ---------- - MENFQ-K-V-  
Emericella.nidulans.CDK1 ---------- - MENYQ-K-I-  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - MKNYK-A-I-  
Homo.sapiens.CDK1 ---------- - MEDYT-K-I-  
Candida.albicans.CDK1 ---------- - LSDYQ-R-Q-  
Species Residue at Site 1348
in 'msaprobs'
muscle

The residue for every species at site 1348 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca DYESHVVDWG N QDDYQ-L-V- Site 725
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a KARSFDVTFD V GDEYE-I-I- Site 725
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - MNRYT-T-I-  
Saccharomyces.castelli.IME2 DPPKNIPLKS L YDRYQ-L-I- Site 606
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec GHLIYHRRDM L RARYE-I-V- Site 725
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ------DVKS R AKRYE-K-L- Site 606
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. PSSPTSPKFG K ADSYE-K-L- Site 725
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly TTGVPSNASA P RKSYE-T-V- Site 725
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS MIQLYHDLPG I ENEYK-L-I- Site 725
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ------DVKS R AKLYE-K-L- Site 606
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho YDSVECPFCD E VSKYE-K-L- Site 725
Homo.sapiens.HIPK2..Homeodomain.interacting.protei VQHEV--LCS M TNTYE-V-L- Site 725
Acyrthosiphon.pisum.CDK1 VKEGPTKNVS I NVNYD-K-L- Site 606
Candida.tropicalis.CDK1 SPPKNLTVHS Y QRSYQ-T-I- Site 606
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin KMKTQIERTK V EDLFN-YEG- Site 606
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ATVGKPPDRQ Q EINYC-E-V- Site 725
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR DYESYVVDWG N QEDYQ-L-V- Site 725
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de --SLSEIGFG K LETYI-K-L- Site 725
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 DYESLIVQWG E QDDYE-V-V- Site 725
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d --------FG K METYI-K-L- Site 725
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA RQELNRTVWE L PRRYI-S-L- Site 725
Candida.albicans.SSN3..Serine.threonine.protein.ki KHRKDLTRES V LSTYQ-I-M- Site 725
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF AAATVTPNSP R IAQYR-L-V- Site 725
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ATEGPPPDRT K EISYT-D-T- Site 606
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara REEINSTVWE V PAKYV-C-L- Site 725
Species Residue at Site 1348
in 'msaprobs'
muscle

The residue for every species at site 1348 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de VPKLHFVGCS H LTDYH-L-M- Site 606
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei DYESHVVEWG N QDDYQ-L-V- Site 725
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U MLHEV--LCS V KNTYE-V-L- Site 725
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d KYLPALQGCR S VEEFQ-C-L- Site 725
Candida.dubliniensis.IME2 SPPKHLTVHS Y HSKYQ-T-I- Site 606
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a SVQVADSTFT V LKRYQ-Q-L- Site 725
Aspergillus.niger.IME2 RGAAPTSVAS L EDRFE-V-L- Site 725
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge RQELNKTLWE V PDRYQ-N-L- Site 725
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - MEMYE-T-L-  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. PSSPTSPKFG K ADSYE-K-L- Site 725
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein DYESHVVEWG N QDDYQ-L-V- Site 725
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty YDYILKNGEI F DKRYV-I-LS Site 724
Schizosaccharomyces.japonicus.IME2 KEKSVTTCTK L EDMYD-V-F- Site 606
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. SVTIGEAQMV V LKRYQ-N-L- Site 725
Gallus.gallus.CDK1 ---------- - MEDYT-K-I-  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - MQKYE-K-L-  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P RVQDGVTGET R ELQYT-Q-C- Site 725
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE NCGGPRPAAL T LKDFK-V-G- Site 606
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. SVATDGVDQQ V EISYY-D-Q- Site 605
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. RQEVTKTAWE V RAVYR-D-L- Site 725
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ YEQGVTIDWG K ISNYE-I-I- Site 725
Kluyveromyces.waltii.IME2 NPPFYIPVKP I ANRYA-L-M- Site 606
Debaryomyces.hansenii.SKY1 YHTCYIGENY K SNKYT-L-V- Site 725
Saccharomyces.cerevisiae.IME2 NPPLSIPLKT L SDRYQ-L-I- Site 725
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1348
in 'msaprobs'
muscle

The residue for every species at site 1348 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -------DSL A DQQYE-C-V- Site 606
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein DYEAHVPSWG N QDDYQ-L-V- Site 725
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ESLMNIHGFD L GSRYM-D-L- Site 725
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -----DSLSR A DQQYE-C-V- Site 606
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST DVDRKNHGGT I DISYP-T-T- Site 725
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk TQEVNKTVWE V KERYR-E-L- Site 725
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - MEMYE-T-L-  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act SIDVGDSTFT V LKRYQ-N-L- Site 725
Candida.albicans.IME2 SPPKHLTVHS Y HSKYQ-T-I- Site 606
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------E M KGQYE-P-V- Site 606
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k SLRSPYSACR S VDCFK-K-L- Site 725
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. RQELNKTIWE V PERYQ-N-L- Site 725
Kluyveromyces.lactis.IME2 NPPFYIPLKN I DARYN-V-I- Site 606
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina KARSFDVTFD V GDEYE-I-I- Site 725
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. SVEVGDSTFT V LKRYQ-N-L- Site 725
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. RQELNKTVWE V PQRLQ-G-L- Site 725
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ILKESRPEII V GGKYR-V-I- Site 606
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. RQELNKTVWE V PQRLQ-G-L- Site 725
Amphimedon.queenslandica.CDK1 ---------- - MDGYE-R-L-  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - MEKYE-K-L-  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------A I QASFQ-K-V- Site 606
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME NYYPGVQGCR S VEEFQ-C-L- Site 725
Neurospora.crassa.IME2 SSHGIGSGQA L EDRFE-V-L- Site 606
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - MQKYD-K-M-  
Dictyostelium.discoideum.DYRK2..Probable.serine.th GEYKVVERDH I AYRFE-I-V- Site 725
Species Residue at Site 1348
in 'msaprobs'
muscle

The residue for every species at site 1348 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- A ATRYE-P-V- Site 725
Hydra.magnipapillata.CDK1 ---------S I MDIFQ-K-L- Site 606
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar PASERLGKCR S VKEFE-K-L- Site 725
Ashbya.gossypii.IME2 NPPFYIPLKP V EGRYK-L-I- Site 606
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi SSSINECISV N GRIYS-I-L- Site 725
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos GAYIHVPRDH L AYRYE-V-L- Site 725
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p PPPTIDPNDP V QISFP-T-T- Site 606
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ----TEVEEH I SSKYE-I-K- Site 725
Schizosaccharomyces.pombe.b.IME2 YSVLDLTQVI F EDRYL-V-K- Site 725
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a PEMVRGQVFD V GPRYT-N-L- Site 725
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom VQHEV--LCS M KNTYE-V-L- Site 725
Schizosaccharomyces.pombe.CDK1 ---------- - MENYQ-K-V-  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch GHLICRSGDV L QERYE-I-V- Site 725
Saccoglossus.kowalevskii.CDK1 ---------- - MENFQ-K-I-  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas --------LR V GNRYR-L-G- Site 606
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac SVEIGDSTFT V LKRYQ-N-L- Site 725
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - MDVFQ-K-V-  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - MDMFQ-K-V-  
Yarrowia.lipolytica.IME2 EDRRSLTVKS L DDRYV-L-L- Site 725
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil RARKDRMRVS V LEKYE-V-I- Site 725
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - MESFQ-K-V-  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K MDDLYDKVPQ L SSRYK-L-L- Site 725
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly KVQDGVTGET R EIQYT-Q-C- Site 606
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk TARDGSTGEV K QLSYT-S-S- Site 606
Species Residue at Site 1348
in 'msaprobs'
muscle

The residue for every species at site 1348 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro YDYILKNGEI F DKRYV-I-LS Site 725
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo HHHQHSHHPQ Q QLDIE-P-D- Site 727
Scheffersomyces.stipitis.SKY1 YHTCYIGENY K NGKYT-L-V- Site 725
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - MQKYE-K-L-  

Generated by PhyloBot at 16:46, October 23rd 2019
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