cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1344 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1344 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1344 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1344 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1344
in 'msaprobs'
muscle

The residue for every species at site 1344 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 QNGRSLKEVI K CTAIYDVFS- Site 602
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD YKQGGYHPVR R NDVYGNRYQ- Site 721
Danio.rerio.CDK1 ---------- - ----MESFQ-  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge GRFIQYNIFG N IFEVTAKYKP Site 721
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----MQKYE-  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- R NSSKVGRYE- Site 602
Candida.guilliermondii.IME2 PDVNKPPPTI P LKSLENDYK- Site 721
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - -HVVGGKFK-  
Chlamydomonas.reinhardtii.LF4 ---------- - ----MHKYR-  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g LETKVVTDGT T GEKKTISYE- Site 600
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 --MRILKESR P EIIVGGKYR- Site 602
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ASYSGSQSRD D STIVGLHYK- Site 721
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho --DFKVKLSS E RERVEDLFE- Site 602
Schizosaccharomyces.octosporus.b.IME2 -EIPFSSLNL K EFRFEDRYY- Site 606
Candida.albicans.MAPK3..Extracellular.signal.regul ------SPRQ V SFNVSDHYQ- Site 605
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. KDYWDYESLN V QWGEQDDYE- Site 721
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 --RMGEKSSR S DRVVAGKWR- Site 721
Suberites.domuncula.JNK..Stress.activated.protein. SDYYSQRVGD T VFTVQKRYT- Site 721
Homo.sapiens.CLK3..Dual.specificity.protein.kinase DDKEGHLVCR I GDWLQERYE- Site 721
Aedes.aegypti.CDK1 ---------- - ----MEDFQ-  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci DDEEGHLICQ S GDVLSARYE- Site 721
Homo.sapiens.CLK2..Dual.specificity.protein.kinase DDAEGHLIYH V GDWLQERYE- Site 721
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos DDEHGFYLKV L HDHIAYRYE- Site 721
Homo.sapiens.HIPK1..Homeodomain.interacting.protei DYQLVQHEI- - LCSMTNSYE-  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----MERYE-  
Species Residue at Site 1344
in 'msaprobs'
muscle

The residue for every species at site 1344 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------F I CIPMSDSFQ- Site 602
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. REYWDYEAHV P SWGNQDDYQ- Site 721
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM PQSNAEVIRG Q IFEVGPRYI- Site 721
Strongylocentrotus.purpuratus.CDK1 ---------- - ----MNNFE-  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - -RIVGSKYK-  
Drosophila.melanogaster.CDK1 ---------- - ----MEDFE-  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - -LRIGGKYR-  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH RKGGYHAVRV G DPFSGGRYI- Site 721
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - -FGKLETYV-  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. PKRTSSYGGN S PFGRADSYQ- Site 721
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET NQFYSVEVGD S TFTVLKRYQ- Site 721
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----MEKYE-  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U NQFYSVEVGD S TFTVLKRYQ- Site 721
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. KGFYKQDVNK T AWELPKTYV- Site 721
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo TVKAHHHQHS H HPQQQLDIE- Site 723
Bombus.terrestris.CDK1 ---------- - ----MDNFV-  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 YCKGGYHLVK I GDLFNGRYH- Site 719
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - --KVMEKYQ-  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. SNFSVFEIGD S TFTVLKRYQ- Site 721
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d YGERRQTESD W GKRCVDKFD- Site 721
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----MKNYK-  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. --NLTDAADD R SYKEMEKYT- Site 598
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G --NAADAADE R SRKEMDRFQ- Site 602
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 --MRILKESR P EIIVGGKYR- Site 602
Species Residue at Site 1344
in 'msaprobs'
muscle

The residue for every species at site 1344 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - -PRVGNKFR-  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO DGDYQLVQHE V LYSLSAEYE- Site 721
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C KDYWDYESLI V QWGEQDDYE- Site 721
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl AAVKAHHHQH S HHAQQLDIE- Site 723
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----MEKYE-  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei DYQLVQHEV- - LCSMKNTYE-  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O QELPKYLPAL Q GCRSVEEFQ- Site 721
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d --------IP D IGNVMNKFE- Site 602
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci DDAEGHLIYH V GDWLQERYE- Site 721
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O QELPKYLPAL Q GCRSVEEFQ- Site 721
Naegleria.gruberi.LF4 QGQHFDQAQF E RMLSQRHYK- Site 721
Saccharomyces.bayanus.IME2 PDVDNPPLSI P LKTLSDRYQ- Site 721
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. REYWDYEAHV P SWGNQDDYQ- Site 721
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a PGYFRQEINK T IWEVPDRYK- Site 721
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----MDKYN-  
Dictyostelium.discoideum.DYRK1..Probable.serine.th DDENADYIVR I GEVFVDRFE- Site 721
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos DDDNHDYIVR S GERWLERYE- Site 721
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos DDDQGSYVQV P HDHVAYRYE- Site 721
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d --------IP N IGNVMNKFE- Site 602
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a --------AE V DRHVAQRYL- Site 603
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific QTPSSAFSNE S ITIKGKQFF- Site 721
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos DDEHGSYMKV L HDHIAYRYE- Site 721
Aspergillus.nidulans.IME2 EHPSRGLTPT S MATLSDRFE- Site 604
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi IKRDIEELCE A VPQLVNVFK- Site 604
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se SNAILAAAQP F YPPPVQDSQ- Site 723
Species Residue at Site 1344
in 'msaprobs'
muscle

The residue for every species at site 1344 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----MNRYT-  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----MENFQ-  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. NQFYSVEVGD S TFTVLKRYQ- Site 721
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. IIVTTIGGRN G QPKQTISYM- Site 721
Penicillium.marneffei.IME2 HEYSLKGTSH S AMTLEDRFE- Site 721
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen PTFYRQELNK T IWEVPERYQ- Site 721
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a --KGDCIASV Y GYDLGGRFV- Site 606
Drosophila.melanogaster.MAK ---------- - ----MNRYI-  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH DDIEGYYKVV L MEELDSRYI- Site 721
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr TDAEGYYRVN I GEVLDKRYN- Site 721
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de YGERRQTESD W GKRCVDKFD- Site 721
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep TFSPIVLTST Y RLDVQEKYT- Site 721
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d FFTVPPEHRL G RCRSVKEFE- Site 721
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin NQFYSVEVGD S TFTVLKRYQ- Site 721
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a SQFYSVQVAD S TFTVLKRYQ- Site 721
Homo.sapiens.CLK1..Dual.specificity.protein.kinase DDEEGHLICQ S GDVLSARYE- Site 721
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis VKKDIEKLYE A VPQLSNVFK- Site 721
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 --MRILKESR P EIIVGGKYR- Site 602
Candida.parapsilosis.IME2 YYNDSPPKHV T VHSYQQRYQ- Site 602
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----KDGYK-  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen TTVVATLGQG P ERSQEVAYT- Site 602
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. SQFYSVQVAD S TFTVLKRYQ- Site 721
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki REYWDYESHV V EWGNQDDYQ- Site 721
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U DDEEGHLICE S GDVLRARYE- Site 721
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a --KGDCIASV Y GYDLGGRFI- Site 606
Species Residue at Site 1344
in 'msaprobs'
muscle

The residue for every species at site 1344 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ------SLSE I GFGKLETYI- Site 721
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. REYWDYESHV V EWGNQDDYQ- Site 721
Yarrowia.lipolytica.SSN3..Serine.threonine.protein FAAYTARKAK T KKRVLDKYE- Site 721
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. CKFRKEEVNK T LWEIPLRYA- Site 721
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos DDDNHDYIVR S GERWLERYE- Site 721
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE REYWDYEAHM I EWGQIDDYQ- Site 721
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ---QTISYS-  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD KPRSNKFDKV I IKSNGVCYI- Site 721
Candida.orthopsilosis.IME2 YYNDSPPKHV T VHSYQQRYQ- Site 602
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- D VKSRAKRYE- Site 602
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ENYYVVPIGE T QMVILKRYE- Site 721
Debaryomyces.hansenii.IME2 PDINNPPSGI P LKSFGDHYQ- Site 602
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati GHVLSASAGT G ASRQTYNYS- Site 723
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin IGPYRQRKDA G RVSVLEKYE- Site 721
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -------DIS P ERDLSGRFR- Site 602
Caenorhabditis.briggsae.CDK1 ------IRKN D MNYTLDDFT- Site 598
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO DEYWDYENYV V DWGNQDDYQ- Site 721
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----MDQYC-  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos DDADGAYIHV P RDHLAYRYE- Site 721
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------D G TNLADQQYE- Site 602
Monosiga.brevicollis.CDK1 ---------- - ---LHDDYV-  
Saccharomyces.cerevisiae.SKY1 RPGGYHPAFK G EPYKDARYI- Site 721
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ------GQRS I SFNVSHHYQ- Site 721
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----MEKYE-  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg TTVVATPGQG T DRVQEVSYT- Site 602
Species Residue at Site 1344
in 'msaprobs'
muscle

The residue for every species at site 1344 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - -IRVANKYA-  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. --------TV V DPRIVRRYL- Site 602
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----MEKYE-  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ---SVLSFE-  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d --------IP N IGNVMNKFE- Site 602
Ajellomyces.capsulatus.CDK1 ---------- - ----MENYQ-  
Dictystelium.discoideum.MAPK3..Extracellular.signa NDNISYFVYG S QFTVPRRYS- Site 721
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------D G LCRADQQYE- Site 602
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep FFTVPPEHRL G RCRSVKEFE- Site 721
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac NNFYSVEIGD S TFTVLKRYQ- Site 721
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. RGFYKQDINK T AWELPKTYL- Site 721
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO KRQKMSQAKK F GDGDPFNYQ- Site 600
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri PLPQALSAPQ C NGDGRGEPE- Site 723
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha NQFYSVEVGD S TFTVLKRYQ- Site 721
Saccharomyces.cerevisiae.CDK1 ---------- - ---ELANYK-  
Lodderomyces.elongisporus.IME2 PQPPQSPKNL T VHSYNNHYQ- Site 721
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen PTFYRQEVNK T IWEVPVQYQ- Site 721
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un DDVEGHLIYH S GDWLQERYE- Site 721
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar --------IP N IGNVMNKFE- Site 602
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. RRTVVKGHSN P RSQLLFHAV- Site 604
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D AHAQERRIQE L DQTVESIFD- Site 602
Homo.sapiens.CLK4..Dual.specificity.protein.kinase DDEEGHLICQ S GDVLRARYE- Site 721
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U DYQLVQHEV- - LCSMTNTYE-  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----MEKYE-  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen TTVVATVGQG P ERSQEVAYT- Site 602
Species Residue at Site 1344
in 'msaprobs'
muscle

The residue for every species at site 1344 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ------AHEG D SVYTLNDFT- Site 606
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ---ATSRYE-  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro MHLYRARRDK E RRGVLKTYK- Site 721
Salmo.salar.CDK1 ---------- - ----MESFQ-  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- D VRSRAKQYE- Site 602
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----MDQYC-  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi QVLASSSANE C ISVKGRIYS- Site 721
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen TTVVATPGQG P DRPQEVSYT- Site 602
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable RPTQGERGPG S PGEPMEKYQ- Site 721
Aspergillus.fumigatus.IME2 DYPSRVPATT S MATLEDRFE- Site 602
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan --DFKVKLTG E RERVEDLFE- Site 602
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - --------E-  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha RGFYRQELNR T IWELPRRYT- Site 721
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S SNAILAAAQP F YQPPVQDSQ- Site 723
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma DYQLVQHEV- - LCSMTNTYE-  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina VPGEVEMVKG Q PFDVGPRYT- Site 721
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - -FGKMETYI-  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. FFTVPPEHRL G RCRSVKEFE- Site 721
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----MEKYE-  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S HQHYTVEVGD T NFTIHSRYI- Site 721
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. KGFYRIEINK M VWEVPKRYS- Site 721
Candida.glabrata.IME2 PDLDSPPSTI P LKSMHENYE- Site 602
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----MNRYT-  
Schizosaccharomyces.pombe.IME2 KQPKYTKEVR K CISIDEVYN- Site 721
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P EQPEQAPARQ I SFNVSSHYQ- Site 605
Species Residue at Site 1344
in 'msaprobs'
muscle

The residue for every species at site 1344 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----MQKYE-  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom --------T- - IQSETDCYD-  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -----SSGSK A EFIVGGKYK- Site 602
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - -FGKLETYV-  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----MEKYE-  
Branchiostoma.floridae.CDK1 ---------- - ----MDNFQ-  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara DDDEGHLIYR V GDWLQERYE- Site 721
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH IIKETARDGS T GEVKQLSYT- Site 602
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ------VGRP A REDVLEKYE- Site 602
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR MVVASVATDG V DQQVEISYY- Site 601
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. FFEVPAADRL G RCRSVKEFE- Site 721
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----MNRYT-  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci DDKEGHLVCR I GDWLQERYE- Site 721
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos DDDNYDYIVK N GEKWMDRYE- Site 721
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----MENFQ-  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act LALLKARSFD V TFDVGDEYE- Site 721
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. PTFYRQELNK T IWEVPERYQ- Site 721
Lachancea.thermotolerans.SKY1 KPGGYHPAFR G ETYNEGRYM- Site 721
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a --KFESLMNI H GFDLGSRYM- Site 721
Dictyostelium.discoideum.CDK1 ---------- - -DGGLSRYQ-  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. KGFYRQEVTK T AWEVRAVYQ- Site 721
Xenopus.tropicalis.IME2 ---------- - ----MENFQ-  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U DYQLVQHEI- - LCSMTNSYE-  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. REYWDYESHV V EWGNQDDYQ- Site 721
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----MENFQ-  
Species Residue at Site 1344
in 'msaprobs'
muscle

The residue for every species at site 1344 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - --AFQQVFQ-  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. LRQGLPWKKS L PFGAASSYL- Site 721
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD --------ED I DKHVLRKYE- Site 603
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos DDDNYDYIVK N GEKWMDRYE- Site 721
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen TTVVATPGQG P DRPQEVSYT- Site 602
Drosophila.melanogaster.GSK3H..Putative.glycogen.s TTVVATNAFG A DVMSEISYT- Site 602
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD QNEIPERLKM G RCRPVTEFE- Site 721
Encephalitozoon.cuniculi.CDK1 ---------- - ----TESFQ-  
Saccharomyces.kluyveri.IME2 PDLDNPPFYI P LKNISDRYE- Site 602
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci DDEEGHLICQ S GDVLRARYE- Site 721
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a AGAGPEMVRG Q VFDVGPRYT- Site 604
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. LRQGFQWRKS L PFGAASSYL- Site 721
Cryptococcus.neoformans.IME2 DAENDGRVGV E DPRADRVYT- Site 721
Homo.sapiens.HIPK4..Homeodomain.interacting.protei --------T- - IQSETDCYD-  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote YCKGGYHLVK I GDLFNGRYH- Site 719
Candida.lusitaniae.IME2 DNQDQGISPI Q IDSFQKNYY- Site 721
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom DYQLVQHEI- - LCSMTNSYE-  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A --EFKMKTQQ E RAKVEDLFE- Site 599
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----MDQYS-  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ---EMEKFE-  
Gallus.gallus.CDK2 ---------- - ----MENFQ-  
Emericella.nidulans.CDK1 ---------- - ----MENYQ-  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----MKNYK-  
Homo.sapiens.CDK1 ---------- - ----MEDYT-  
Candida.albicans.CDK1 ---------- - ----LSDYQ-  
Species Residue at Site 1344
in 'msaprobs'
muscle

The residue for every species at site 1344 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca REYWDYESHV V DWGNQDDYQ- Site 721
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a LALLKARSFD V TFDVGDEYE- Site 721
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----MNRYT-  
Saccharomyces.castelli.IME2 PDLNDPPKNI P LKSLYDRYQ- Site 602
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec DDDEGHLIYH R RDMLRARYE- Site 721
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- D VKSRAKRYE- Site 602
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. RHSSPSSPTS P KFGKADSYE- Site 721
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly GHTVTTGVPS N ASAPRKSYE- Site 721
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS IKEEMIQLYH D LPGIENEYK- Site 721
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- D VKSRAKLYE- Site 602
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---QYDSVEC P FCDEVSKYE- Site 606
Homo.sapiens.HIPK2..Homeodomain.interacting.protei DYQLVQHEV- - LCSMTNTYE-  
Acyrthosiphon.pisum.CDK1 NRQFVKEGPT K NVSINVNYD- Site 602
Candida.tropicalis.CDK1 LDCDSPPKNL T VHSYQRSYQ- Site 602
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin --DFKMKTQI E RTKVEDLFN- Site 602
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G TTVLATVGKP P DRQQEINYC- Site 721
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR REYWDYESYV V DWGNQEDYQ- Site 721
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ------SLSE I GFGKLETYI- Site 721
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 KDYWDYESLI V QWGEQDDYE- Site 721
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - -FGKMETYI-  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA RGFYRQELNR T VWELPRRYI- Site 721
Candida.albicans.SSN3..Serine.threonine.protein.ki LGPFKHRKDL T RESVLSTYQ- Site 721
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF LGVGAAATVT P NSPRIAQYR- Site 721
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA TSVTATEGPP P DRTKEISYT- Site 602
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara VEFSREEINS T VWEVPAKYV- Site 721
Species Residue at Site 1344
in 'msaprobs'
muscle

The residue for every species at site 1344 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de KLDVVPKLHF V GCSHLTDYH- Site 602
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei RDYWDYESHV V EWGNQDDYQ- Site 721
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U DYQLMLHEV- - LCSVKNTYE-  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d QELPKYLPAL Q GCRSVEEFQ- Site 721
Candida.dubliniensis.IME2 LDYDSPPKHL T VHSYHSKYQ- Site 602
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a GQFYSVQVAD S TFTVLKRYQ- Site 721
Aspergillus.niger.IME2 HSLSRGAAPT S VASLEDRFE- Site 604
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge YVFYRQELNK T LWEVPDRYQ- Site 721
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----MEMYE-  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. RHSSPSSPTS P KFGKADSYE- Site 721
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein REYWDYESHV V EWGNQDDYQ- Site 721
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty DDQNYDYILK N GEIFDKRYV- Site 719
Schizosaccharomyces.japonicus.IME2 WGTSKEKSVT T CTKLEDMYD- Site 602
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ENYYSVTIGE A QMVVLKRYQ- Site 721
Gallus.gallus.CDK1 ---------- - ----MEDYT-  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----MQKYE-  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P VIRERVQDGV T GETRELQYT- Site 721
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE MKNMNCGGPR P AALTLKDFK- Site 602
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. MVVASVATDG V DQQVEISYY- Site 601
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. SGFYRQEVTK T AWEVRAVYR- Site 721
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ EYWDYEQGVT I DWGKISNYE- Site 721
Kluyveromyces.waltii.IME2 PDVSNPPFYI P VKPIANRYA- Site 602
Debaryomyces.hansenii.SKY1 VPGGYHTCYI G ENYKSNKYT- Site 606
Saccharomyces.cerevisiae.IME2 PDVDNPPLSI P LKTLSDRYQ- Site 721
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1344
in 'msaprobs'
muscle

The residue for every species at site 1344 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - DSLADQQYE-  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein REYWDYEAHV P SWGNQDDYQ- Site 721
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a --KFESLMNI H GFDLGSRYM- Site 721
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------D S LSRADQQYE- Site 602
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST DRKTDVDRKN H GGTIDISYP- Site 721
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk KGYYTQEVNK T VWEVKERYR- Site 721
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----MEMYE-  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act KEYYSIDVGD S TFTVLKRYQ- Site 721
Candida.albicans.IME2 LDYDSPPKHL T VHSYHSKYQ- Site 602
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - --EMKGQYE-  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k QYFSSLRSPY S ACRSVDCFK- Site 721
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. PTFYRQELNK T IWEVPERYQ- Site 721
Kluyveromyces.lactis.IME2 PDVNNPPFYI P LKNIDARYN- Site 602
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina LALLKARSFD V TFDVGDEYE- Site 721
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. NQFYSVEVGD S TFTVLKRYQ- Site 721
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. AGFYRQELNK T VWEVPQRLQ- Site 721
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 --MRILKESR P EIIVGGKYR- Site 602
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. AGFYRQELNK T VWEVPQRLQ- Site 721
Amphimedon.queenslandica.CDK1 ---------- - ----MDGYE-  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----MEKYE-  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - --AIQASFQ-  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME IPLPNYYPGV Q GCRSVEEFQ- Site 721
Neurospora.crassa.IME2 TPQGSSHGIG S GQALEDRFE- Site 602
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----MQKYD-  
Dictyostelium.discoideum.DYRK2..Probable.serine.th DNDIGEYKVV E RDHIAYRFE- Site 721
Species Residue at Site 1344
in 'msaprobs'
muscle

The residue for every species at site 1344 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ---AATRYE-  
Hydra.magnipapillata.CDK1 ---------- - --SIMDIFQ-  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar YFEVPASERL G KCRSVKEFE- Site 721
Ashbya.gossypii.IME2 PDVNNPPFYI P LKPVEGRYK- Site 602
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi QISGSSSINE C ISVNGRIYS- Site 721
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos DDADGAYIHV P RDHLAYRYE- Site 721
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p YYAHPPPTID P NDPVQISFP- Site 602
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace --------TE V EEHISSKYE- Site 603
Schizosaccharomyces.pombe.b.IME2 -ESIYSVLDL T QVIFEDRYL- Site 721
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a AAAGPEMVRG Q VFDVGPRYT- Site 604
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom DYQLVQHEV- - LCSMKNTYE-  
Schizosaccharomyces.pombe.CDK1 ---------- - ----MENYQ-  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch DDEEGHLICR S GDVLQERYE- Site 721
Saccoglossus.kowalevskii.CDK1 ---------- - ----MENFQ-  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - -LRVGNRYR-  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac NNFYSVEIGD S TFTVLKRYQ- Site 721
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----MDVFQ-  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----MDMFQ-  
Yarrowia.lipolytica.IME2 QPVTEDRRSL T VKSLDDRYV- Site 721
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil IGPYRARKDR M RVSVLEKYE- Site 721
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----MESFQ-  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K IIQEMDDLYD K VPQLSSRYK- Site 603
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly VIREKVQDGV T GETREIQYT- Site 602
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk IIKETARDGS T GEVKQLSYT- Site 602
Species Residue at Site 1344
in 'msaprobs'
muscle

The residue for every species at site 1344 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro DDQNYDYILK N GEIFDKRYV- Site 721
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo TVKAHHHQHS H HPQQQLDIE- Site 723
Scheffersomyces.stipitis.SKY1 VPGGYHTCYI G ENYKNGKYT- Site 606
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----MQKYE-  

Generated by PhyloBot at 16:39, October 23rd 2019
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