cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 1343 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1343 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1343 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1343 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1343
in 'msaprobs'
muscle

The residue for every species at site 1343 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 NQNGRSLKEV I KCTAIYDVFS Site 601
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD DYKQGGYHPV R RNDVYGNRYQ Site 720
Danio.rerio.CDK1 ---------- - -----MESFQ  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge GGRFIQYNIF G NIFEVTAKYK Site 720
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - -----MQKYE  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - RNSSKVGRYE  
Candida.guilliermondii.IME2 PPDVNKPPPT I PLKSLENDYK Site 720
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - --HVVGGKFK  
Chlamydomonas.reinhardtii.LF4 ---------- - -----MHKYR  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g HLETKVVTDG T TGEKKTISYE Site 599
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---MRILKES R PEIIVGGKYR Site 601
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 SASYSGSQSR D DSTIVGLHYK Site 719
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---DFKVKLS S ERERVEDLFE Site 601
Schizosaccharomyces.octosporus.b.IME2 --EIPFSSLN L KEFRFEDRYY Site 605
Candida.albicans.MAPK3..Extracellular.signal.regul -------SPR Q VSFNVSDHYQ Site 604
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. PKDYWDYESL N VQWGEQDDYE Site 720
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---RMGEKSS R SDRVVAGKWR Site 719
Suberites.domuncula.JNK..Stress.activated.protein. -SDYYSQRVG D TVFTVQKRYT Site 719
Homo.sapiens.CLK3..Dual.specificity.protein.kinase EDDKEGHLVC R IGDWLQERYE Site 719
Aedes.aegypti.CDK1 ---------- - -----MEDFQ  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci EDDEEGHLIC Q SGDVLSARYE Site 719
Homo.sapiens.CLK2..Dual.specificity.protein.kinase EDDAEGHLIY H VGDWLQERYE Site 720
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos FDDEHGFYLK V LHDHIAYRYE Site 719
Homo.sapiens.HIPK1..Homeodomain.interacting.protei GDYQLVQHEI - -LCSMTNSYE  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - -----MERYE  
Species Residue at Site 1343
in 'msaprobs'
muscle

The residue for every species at site 1343 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- F ICIPMSDSFQ Site 601
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. SREYWDYEAH V PSWGNQDDYQ Site 720
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM VPQSNAEVIR G QIFEVGPRYI Site 720
Strongylocentrotus.purpuratus.CDK1 ---------- - -----MNNFE  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - --RIVGSKYK  
Drosophila.melanogaster.CDK1 ---------- - -----MEDFE  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - --LRIGGKYR  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH YRKGGYHAVR V GDPFSGGRYI Site 720
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - --FGKLETYV  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. SPKRTSSYGG N SPFGRADSYQ Site 719
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET DNQFYSVEVG D STFTVLKRYQ Site 720
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - -----MEKYE  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U DNQFYSVEVG D STFTVLKRYQ Site 720
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. KKGFYKQDVN K TAWELPKTYV Site 720
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ATVKAHHHQH S HHPQQQLDIE Site 722
Bombus.terrestris.CDK1 ---------- - -----MDNFV  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 DYCKGGYHLV K IGDLFNGRYH Site 718
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ---KVMEKYQ  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. DSNFSVFEIG D STFTVLKRYQ Site 720
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d RYGERRQTES D WGKRCVDKFD Site 720
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - -----MKNYK  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---NLTDAAD D RSYKEMEKYT Site 597
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---NAADAAD E RSRKEMDRFQ Site 601
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---MRILKES R PEIIVGGKYR Site 601
Species Residue at Site 1343
in 'msaprobs'
muscle

The residue for every species at site 1343 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - --PRVGNKFR  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ADGDYQLVQH E VLYSLSAEYE Site 719
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C PKDYWDYESL I VQWGEQDDYE Site 720
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl AAAVKAHHHQ H SHHAQQLDIE Site 722
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - -----MEKYE  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei GDYQLVQHEV - -LCSMKNTYE  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O KQELPKYLPA L QGCRSVEEFQ Site 720
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------I P DIGNVMNKFE Site 601
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci EDDAEGHLIY H VGDWLQERYE Site 720
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O KQELPKYLPA L QGCRSVEEFQ Site 720
Naegleria.gruberi.LF4 EQGQHFDQAQ F ERMLSQRHYK Site 720
Saccharomyces.bayanus.IME2 PPDVDNPPLS I PLKTLSDRYQ Site 720
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. SREYWDYEAH V PSWGNQDDYQ Site 720
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a RPGYFRQEIN K TIWEVPDRYK Site 719
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - -----MDKYN  
Dictyostelium.discoideum.DYRK1..Probable.serine.th YDDENADYIV R IGEVFVDRFE Site 719
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos YDDDNHDYIV R SGERWLERYE Site 720
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos YDDDQGSYVQ V PHDHVAYRYE Site 719
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------I P NIGNVMNKFE Site 601
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------A E VDRHVAQRYL Site 602
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific TQTPSSAFSN E SITIKGKQFF Site 719
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos FDDEHGSYMK V LHDHIAYRYE Site 720
Aspergillus.nidulans.IME2 YEHPSRGLTP T SMATLSDRFE Site 603
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi GIKRDIEELC E AVPQLVNVFK Site 603
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se SSNAILAAAQ P FYPPPVQDSQ Site 722
Species Residue at Site 1343
in 'msaprobs'
muscle

The residue for every species at site 1343 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - -----MNRYT  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - -----MENFQ  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. DNQFYSVEVG D STFTVLKRYQ Site 720
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. HIIVTTIGGR N GQPKQTISYM Site 719
Penicillium.marneffei.IME2 SHEYSLKGTS H SAMTLEDRFE Site 606
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen RPTFYRQELN K TIWEVPERYQ Site 720
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---KGDCIAS V YGYDLGGRFV Site 605
Drosophila.melanogaster.MAK ---------- - -----MNRYI  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH WDDIEGYYKV V LMEELDSRYI Site 719
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr WTDAEGYYRV N IGEVLDKRYN Site 720
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de RYGERRQTES D WGKRCVDKFD Site 720
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep STFSPIVLTS T YRLDVQEKYT Site 719
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d GFFTVPPEHR L GRCRSVKEFE Site 720
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin DNQFYSVEVG D STFTVLKRYQ Site 720
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a DSQFYSVQVA D STFTVLKRYQ Site 720
Homo.sapiens.CLK1..Dual.specificity.protein.kinase EDDEEGHLIC Q SGDVLSARYE Site 720
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis GVKKDIEKLY E AVPQLSNVFK Site 720
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---MRILKES R PEIIVGGKYR Site 601
Candida.parapsilosis.IME2 SYYNDSPPKH V TVHSYQQRYQ Site 601
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - -----KDGYK  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen VTTVVATLGQ G PERSQEVAYT Site 601
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. DSQFYSVQVA D STFTVLKRYQ Site 720
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki PREYWDYESH V VEWGNQDDYQ Site 720
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U EDDEEGHLIC E SGDVLRARYE Site 719
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---KGDCIAS V YGYDLGGRFI Site 605
Species Residue at Site 1343
in 'msaprobs'
muscle

The residue for every species at site 1343 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -------SLS E IGFGKLETYI Site 720
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. PREYWDYESH V VEWGNQDDYQ Site 720
Yarrowia.lipolytica.SSN3..Serine.threonine.protein PFAAYTARKA K TKKRVLDKYE Site 720
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. KCKFRKEEVN K TLWEIPLRYA Site 719
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos YDDDNHDYIV R SGERWLERYE Site 720
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE PREYWDYEAH M IEWGQIDDYQ Site 719
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----QTISYS  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SKPRSNKFDK V IIKSNGVCYI Site 719
Candida.orthopsilosis.IME2 SYYNDSPPKH V TVHSYQQRYQ Site 601
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - DVKSRAKRYE  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str PENYYVVPIG E TQMVILKRYE Site 720
Debaryomyces.hansenii.IME2 PPDINNPPSG I PLKSFGDHYQ Site 601
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati GGHVLSASAG T GASRQTYNYS Site 722
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin SIGPYRQRKD A GRVSVLEKYE Site 720
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE --------DI S PERDLSGRFR Site 601
Caenorhabditis.briggsae.CDK1 -------IRK N DMNYTLDDFT Site 597
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO PDEYWDYENY V VDWGNQDDYQ Site 720
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - -----MDQYC  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos YDDADGAYIH V PRDHLAYRYE Site 720
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- D GTNLADQQYE Site 601
Monosiga.brevicollis.CDK1 ---------- - ----LHDDYV  
Saccharomyces.cerevisiae.SKY1 YRPGGYHPAF K GEPYKDARYI Site 719
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -------GQR S ISFNVSHHYQ Site 606
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - -----MEKYE  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ITTVVATPGQ G TDRVQEVSYT Site 601
Species Residue at Site 1343
in 'msaprobs'
muscle

The residue for every species at site 1343 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - --IRVANKYA  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------T V VDPRIVRRYL Site 601
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - -----MEKYE  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ----SVLSFE  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------I P NIGNVMNKFE Site 601
Ajellomyces.capsulatus.CDK1 ---------- - -----MENYQ  
Dictystelium.discoideum.MAPK3..Extracellular.signa FNDNISYFVY G SQFTVPRRYS Site 720
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- D GLCRADQQYE Site 601
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep GFFTVPPEHR L GRCRSVKEFE Site 720
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac DNNFYSVEIG D STFTVLKRYQ Site 720
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. KRGFYKQDIN K TAWELPKTYL Site 720
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO LKRQKMSQAK K FGDGDPFNYQ Site 599
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri SPLPQALSAP Q CNGDGRGEPE Site 722
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha DNQFYSVEVG D STFTVLKRYQ Site 720
Saccharomyces.cerevisiae.CDK1 ---------- - ----ELANYK  
Lodderomyces.elongisporus.IME2 SPQPPQSPKN L TVHSYNNHYQ Site 606
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen RPTFYRQEVN K TIWEVPVQYQ Site 720
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un EDDVEGHLIY H SGDWLQERYE Site 719
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------I P NIGNVMNKFE Site 601
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. TRRTVVKGHS N PRSQLLFHAV Site 603
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D TAHAQERRIQ E LDQTVESIFD Site 601
Homo.sapiens.CLK4..Dual.specificity.protein.kinase EDDEEGHLIC Q SGDVLRARYE Site 720
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U GDYQLVQHEV - -LCSMTNTYE  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - -----MEKYE  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen VTTVVATVGQ G PERSQEVAYT Site 601
Species Residue at Site 1343
in 'msaprobs'
muscle

The residue for every species at site 1343 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -------AHE G DSVYTLNDFT Site 605
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----ATSRYE  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro PMHLYRARRD K ERRGVLKTYK Site 606
Salmo.salar.CDK1 ---------- - -----MESFQ  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - DVRSRAKQYE  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - -----MDQYC  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi LQVLASSSAN E CISVKGRIYS Site 720
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen VTTVVATPGQ G PDRPQEVSYT Site 601
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable RRPTQGERGP G SPGEPMEKYQ Site 606
Aspergillus.fumigatus.IME2 YDYPSRVPAT T SMATLEDRFE Site 601
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---DFKVKLT G ERERVEDLFE Site 601
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ---------E  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha RRGFYRQELN R TIWELPRRYT Site 720
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S SSNAILAAAQ P FYQPPVQDSQ Site 722
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma GDYQLVQHEV - -LCSMTNTYE  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina GVPGEVEMVK G QPFDVGPRYT Site 720
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - --FGKMETYI  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. GFFTVPPEHR L GRCRSVKEFE Site 720
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - -----MEKYE  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S QHQHYTVEVG D TNFTIHSRYI Site 719
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. RKGFYRIEIN K MVWEVPKRYS Site 719
Candida.glabrata.IME2 PPDLDSPPST I PLKSMHENYE Site 601
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - -----MNRYT  
Schizosaccharomyces.pombe.IME2 GKQPKYTKEV R KCISIDEVYN Site 720
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -EQPEQAPAR Q ISFNVSSHYQ Site 604
Species Residue at Site 1343
in 'msaprobs'
muscle

The residue for every species at site 1343 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - -----MQKYE  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------T - -IQSETDCYD  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ------SSGS K AEFIVGGKYK Site 601
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - --FGKLETYV  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - -----MEKYE  
Branchiostoma.floridae.CDK1 ---------- - -----MDNFQ  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara EDDDEGHLIY R VGDWLQERYE Site 720
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH RIIKETARDG S TGEVKQLSYT Site 601
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -------VGR P AREDVLEKYE Site 601
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR TMVVASVATD G VDQQVEISYY Site 600
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. GFFEVPAADR L GRCRSVKEFE Site 720
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - -----MNRYT  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci EDDKEGHLVC R IGDWLQERYE Site 720
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos YDDDNYDYIV K NGEKWMDRYE Site 719
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - -----MENFQ  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act NLALLKARSF D VTFDVGDEYE Site 720
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. RPTFYRQELN K TIWEVPERYQ Site 720
Lachancea.thermotolerans.SKY1 YKPGGYHPAF R GETYNEGRYM Site 720
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---KFESLMN I HGFDLGSRYM Site 606
Dictyostelium.discoideum.CDK1 ---------- - --DGGLSRYQ  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. RKGFYRQEVT K TAWEVRAVYQ Site 719
Xenopus.tropicalis.IME2 ---------- - -----MENFQ  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U GDYQLVQHEI - -LCSMTNSYE  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. PREYWDYESH V VEWGNQDDYQ Site 720
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - -----MENFQ  
Species Residue at Site 1343
in 'msaprobs'
muscle

The residue for every species at site 1343 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ---AFQQVFQ  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. NLRQGLPWKK S LPFGAASSYL Site 719
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------E D IDKHVLRKYE Site 602
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos YDDDNYDYIV K NGEKWMDRYE Site 719
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen VTTVVATPGQ G PDRPQEVSYT Site 601
Drosophila.melanogaster.GSK3H..Putative.glycogen.s VTTVVATNAF G ADVMSEISYT Site 601
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD EQNEIPERLK M GRCRPVTEFE Site 719
Encephalitozoon.cuniculi.CDK1 ---------- - -----TESFQ  
Saccharomyces.kluyveri.IME2 PPDLDNPPFY I PLKNISDRYE Site 601
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci EDDEEGHLIC Q SGDVLRARYE Site 720
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a AAGAGPEMVR G QVFDVGPRYT Site 603
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. DLRQGFQWRK S LPFGAASSYL Site 719
Cryptococcus.neoformans.IME2 PDAENDGRVG V EDPRADRVYT Site 720
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------T - -IQSETDCYD  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote DYCKGGYHLV K IGDLFNGRYH Site 718
Candida.lusitaniae.IME2 MDNQDQGISP I QIDSFQKNYY Site 719
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom GDYQLVQHEI - -LCSMTNSYE  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---EFKMKTQ Q ERAKVEDLFE Site 598
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - -----MDQYS  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----EMEKFE  
Gallus.gallus.CDK2 ---------- - -----MENFQ  
Emericella.nidulans.CDK1 ---------- - -----MENYQ  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - -----MKNYK  
Homo.sapiens.CDK1 ---------- - -----MEDYT  
Candida.albicans.CDK1 ---------- - -----LSDYQ  
Species Residue at Site 1343
in 'msaprobs'
muscle

The residue for every species at site 1343 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca PREYWDYESH V VDWGNQDDYQ Site 720
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a NLALLKARSF D VTFDVGDEYE Site 720
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - -----MNRYT  
Saccharomyces.castelli.IME2 PPDLNDPPKN I PLKSLYDRYQ Site 601
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec EDDDEGHLIY H RRDMLRARYE Site 719
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - DVKSRAKRYE  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. RRHSSPSSPT S PKFGKADSYE Site 720
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly SGHTVTTGVP S NASAPRKSYE Site 720
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS EIKEEMIQLY H DLPGIENEYK Site 720
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - DVKSRAKLYE  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ----QYDSVE C PFCDEVSKYE Site 605
Homo.sapiens.HIPK2..Homeodomain.interacting.protei GDYQLVQHEV - -LCSMTNTYE  
Acyrthosiphon.pisum.CDK1 KNRQFVKEGP T KNVSINVNYD Site 601
Candida.tropicalis.CDK1 PLDCDSPPKN L TVHSYQRSYQ Site 601
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---DFKMKTQ I ERTKVEDLFN Site 601
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G VTTVLATVGK P PDRQQEINYC Site 719
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR PREYWDYESY V VDWGNQEDYQ Site 720
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -------SLS E IGFGKLETYI Site 720
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 PKDYWDYESL I VQWGEQDDYE Site 720
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - --FGKMETYI  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA RRGFYRQELN R TVWELPRRYI Site 720
Candida.albicans.SSN3..Serine.threonine.protein.ki TLGPFKHRKD L TRESVLSTYQ Site 720
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF VLGVGAAATV T PNSPRIAQYR Site 720
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ITSVTATEGP P PDRTKEISYT Site 601
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara RVEFSREEIN S TVWEVPAKYV Site 720
Species Residue at Site 1343
in 'msaprobs'
muscle

The residue for every species at site 1343 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de RKLDVVPKLH F VGCSHLTDYH Site 601
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei PRDYWDYESH V VEWGNQDDYQ Site 720
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U GDYQLMLHEV - -LCSVKNTYE  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d KQELPKYLPA L QGCRSVEEFQ Site 720
Candida.dubliniensis.IME2 PLDYDSPPKH L TVHSYHSKYQ Site 601
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a DGQFYSVQVA D STFTVLKRYQ Site 720
Aspergillus.niger.IME2 HHSLSRGAAP T SVASLEDRFE Site 603
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge SYVFYRQELN K TLWEVPDRYQ Site 720
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - -----MEMYE  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. RRHSSPSSPT S PKFGKADSYE Site 720
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein PREYWDYESH V VEWGNQDDYQ Site 720
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty YDDQNYDYIL K NGEIFDKRYV Site 718
Schizosaccharomyces.japonicus.IME2 FWGTSKEKSV T TCTKLEDMYD Site 601
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. PENYYSVTIG E AQMVVLKRYQ Site 720
Gallus.gallus.CDK1 ---------- - -----MEDYT  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - -----MQKYE  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P EVIRERVQDG V TGETRELQYT Site 720
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE MMKNMNCGGP R PAALTLKDFK Site 601
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. TMVVASVATD G VDQQVEISYY Site 600
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. RSGFYRQEVT K TAWEVRAVYR Site 719
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ QEYWDYEQGV T IDWGKISNYE Site 720
Kluyveromyces.waltii.IME2 PPDVSNPPFY I PVKPIANRYA Site 601
Debaryomyces.hansenii.SKY1 YVPGGYHTCY I GENYKSNKYT Site 605
Saccharomyces.cerevisiae.IME2 PPDVDNPPLS I PLKTLSDRYQ Site 720
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1343
in 'msaprobs'
muscle

The residue for every species at site 1343 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - -DSLADQQYE  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein SREYWDYEAH V PSWGNQDDYQ Site 720
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---KFESLMN I HGFDLGSRYM Site 606
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- D SLSRADQQYE Site 601
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST HDRKTDVDRK N HGGTIDISYP Site 720
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk RKGYYTQEVN K TVWEVKERYR Site 719
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - -----MEMYE  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act EKEYYSIDVG D STFTVLKRYQ Site 720
Candida.albicans.IME2 PLDYDSPPKH L TVHSYHSKYQ Site 601
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ---EMKGQYE  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k KQYFSSLRSP Y SACRSVDCFK Site 719
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. RPTFYRQELN K TIWEVPERYQ Site 720
Kluyveromyces.lactis.IME2 PPDVNNPPFY I PLKNIDARYN Site 601
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina NLALLKARSF D VTFDVGDEYE Site 720
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. DNQFYSVEVG D STFTVLKRYQ Site 720
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. RAGFYRQELN K TVWEVPQRLQ Site 720
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---MRILKES R PEIIVGGKYR Site 601
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. RAGFYRQELN K TVWEVPQRLQ Site 720
Amphimedon.queenslandica.CDK1 ---------- - -----MDGYE  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - -----MEKYE  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ---AIQASFQ  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME GIPLPNYYPG V QGCRSVEEFQ Site 719
Neurospora.crassa.IME2 LTPQGSSHGI G SGQALEDRFE Site 601
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - -----MQKYD  
Dictyostelium.discoideum.DYRK2..Probable.serine.th YDNDIGEYKV V ERDHIAYRFE Site 719
Species Residue at Site 1343
in 'msaprobs'
muscle

The residue for every species at site 1343 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----AATRYE  
Hydra.magnipapillata.CDK1 ---------- - ---SIMDIFQ  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar GYFEVPASER L GKCRSVKEFE Site 720
Ashbya.gossypii.IME2 PPDVNNPPFY I PLKPVEGRYK Site 601
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi LQISGSSSIN E CISVNGRIYS Site 720
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos YDDADGAYIH V PRDHLAYRYE Site 720
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p VYYAHPPPTI D PNDPVQISFP Site 601
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------T E VEEHISSKYE Site 602
Schizosaccharomyces.pombe.b.IME2 --ESIYSVLD L TQVIFEDRYL Site 606
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a AAAAGPEMVR G QVFDVGPRYT Site 603
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom GDYQLVQHEV - -LCSMKNTYE  
Schizosaccharomyces.pombe.CDK1 ---------- - -----MENYQ  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch RDDEEGHLIC R SGDVLQERYE Site 719
Saccoglossus.kowalevskii.CDK1 ---------- - -----MENFQ  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - --LRVGNRYR  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac DNNFYSVEIG D STFTVLKRYQ Site 720
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - -----MDVFQ  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - -----MDMFQ  
Yarrowia.lipolytica.IME2 IQPVTEDRRS L TVKSLDDRYV Site 720
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil TIGPYRARKD R MRVSVLEKYE Site 720
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - -----MESFQ  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K EIIQEMDDLY D KVPQLSSRYK Site 602
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly EVIREKVQDG V TGETREIQYT Site 601
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk RIIKETARDG S TGEVKQLSYT Site 601
Species Residue at Site 1343
in 'msaprobs'
muscle

The residue for every species at site 1343 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro YDDQNYDYIL K NGEIFDKRYV Site 720
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ATVKAHHHQH S HHPQQQLDIE Site 722
Scheffersomyces.stipitis.SKY1 YVPGGYHTCY I GENYKNGKYT Site 605
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - -----MQKYE  

Generated by PhyloBot at 16:03, October 23rd 2019
Questions/Comments? help@phylobot.com