cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1337 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1337 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1337 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1337 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1337
in 'msaprobs'
muscle

The residue for every species at site 1337 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 RTPSMANQNG R SLKEVIKCTA Site 595
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD EDEGTKDYKQ G GYHPVRRNDV Site 606
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge PAVLSHGGRF I QYNIFGNIFE Site 601
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ------RNSS  
Candida.guilliermondii.IME2 NLHDKTPPDV N KPPPTIPLKS Site 714
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - --------HV  
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ----DSHLET K VVTDGTTGEK Site 593
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------M R ILKESRPEII Site 595
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 HNTGNSSASY S GSQSRDDSTI Site 713
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------D F KVKLSSERER Site 595
Schizosaccharomyces.octosporus.b.IME2 --------EI P FSSLNLKEFR Site 599
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - --SPRQVSFN  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. DVNVIRPKDY W DYESLNVQWG Site 601
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------R M GEKSSRSDRV Site 713
Suberites.domuncula.JNK..Stress.activated.protein. -------SDY Y SQRVGDTVFT Site 601
Homo.sapiens.CLK3..Dual.specificity.protein.kinase RSSRSVEDDK E GHLVCRIGDW Site 713
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci KRSRSVEDDE E GHLICQSGDV Site 713
Homo.sapiens.CLK2..Dual.specificity.protein.kinase RRAKSVEDDA E GHLIYHVGDW Site 714
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos KFSKTSFDDE H GFYLKVLHDH Site 713
Homo.sapiens.HIPK1..Homeodomain.interacting.protei SSSSGEGDYQ L VQHEI--LCS Site 716
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 1337
in 'msaprobs'
muscle

The residue for every species at site 1337 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - -----FICIP  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. EVNSLRSREY W DYEAHVPSWG Site 601
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM GTGSTEVPQS N AEVIRGQIFE Site 714
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - --------RI  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - --------LR  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH EEGFDAYRKG G YHAVRVGDPF Site 714
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - --------FG  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. KYMNQFSPKR T SSYGGNSPFG Site 713
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET MSKSKVDNQF Y SVEVGDSTFT Site 601
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U MSKSKVDNQF Y SVEVGDSTFT Site 601
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ----IRKKGF Y KQDVNKTAWE Site 601
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo VQAAAAATVK A HHHQHSHHPQ Site 716
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 EQEDPNDYCK G GYHLVKIGDL Site 606
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ---------K  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---SKRDSNF S VFEIGDSTFT Site 601
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d PKICCPRYGE R RQTESDWGKR Site 714
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------N L TDAADDRSYK Site 591
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------N A ADAADERSRK Site 595
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------M R ILKESRPEII Site 595
Species Residue at Site 1337
in 'msaprobs'
muscle

The residue for every species at site 1337 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - --------PR  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO KRSSSGADGD Y QLVQHEVLYS Site 605
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C EVNVIRPKDY W DYESLIVQWG Site 601
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl APAQVQAAAV K AHHHQHSHHA Site 604
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei NCTTGEGDYQ L VQHEV--LCS Site 716
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O LLPIELKQEL P KYLPALQGCR Site 714
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - ----IPDIGN  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci RRAKSVEDDA E GHLIYHVGDW Site 714
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O LSPIELKQEL P KYLPALQGCR Site 714
Naegleria.gruberi.LF4 SDDEFGEQGQ H FDQAQFERML Site 714
Saccharomyces.bayanus.IME2 GSEFSIPPDV D NPPLSIPLKT Site 606
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. EVNSLRSREY W DYEAHVPSWG Site 601
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ----RSRPGY F RQEINKTIWE Site 601
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th SKYNDGYDDE N ADYIVRIGEV Site 713
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos KVLNHGYDDD N HDYIVRSGER Site 604
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos GPNNGGYDDD Q GSYVQVPHDH Site 713
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----IPNIGN  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - ----AEVDRH  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific SYIQPPTQTP S SAFSNESITI Site 713
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos KFSKTSFDDE H GSYMKVLHDH Site 714
Aspergillus.nidulans.IME2 -----CYEHP S RGLTPTSMAT Site 597
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi QSVKLSGIKR D IEELCEAVPQ Site 597
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se PQVAHVSSNA I LAAAQPFYPP Site 716
Species Residue at Site 1337
in 'msaprobs'
muscle

The residue for every species at site 1337 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. MSKSKVDNQF Y SVEVGDSTFT Site 601
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. NGTETGHIIV T TIGGRNGQPK Site 713
Penicillium.marneffei.IME2 ------SHEY S LKGTSHSAMT Site 600
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ----KARPTF Y RQELNKTIWE Site 601
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------K G DCIASVYGYD Site 599
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ADMQDNWDDI E GYYKVVLMEE Site 605
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr PNLRDNWTDA E GYYRVNIGEV Site 714
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de PKICCPRYGE R RQTESDWGKR Site 714
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep GGGGGSSTFS P IVLTSTYRLD Site 602
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d KCIRKEGFFT V PPEHRLGRCR Site 603
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin MSKSKVDNQF Y SVEVGDSTFT Site 601
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---SKCDSQF Y SVQVADSTFT Site 601
Homo.sapiens.CLK1..Dual.specificity.protein.kinase KRTRSVEDDE E GHLICQSGDV Site 714
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis QNFKLAGVKK D IEKLYEAVPQ Site 714
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------M R ILKESRPEII Site 595
Candida.parapsilosis.IME2 ---MALSYYN D SPPKHVTVHS Site 595
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen GRDSGKVTTV V ATLGQGPERS Site 595
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---SKCDSQF Y SVQVADSTFT Site 601
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki DVNTHRPREY W DYESHVVEWG Site 601
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U KRSRSVEDDE E GHLICESGDV Site 713
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------K G DCIASVYGYD Site 599
Species Residue at Site 1337
in 'msaprobs'
muscle

The residue for every species at site 1337 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - --SLSEIGFG  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. DVNTHRPREY W DYESHVVEWG Site 601
Yarrowia.lipolytica.SSN3..Serine.threonine.protein LGGGTNPFAA Y TARKAKTKKR Site 714
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ----SVKCKF R KEEVNKTLWE Site 601
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos KVLNHGYDDD N HDYIVRSGER Site 604
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE EVNPSRPREY W DYEAHMIEWG Site 601
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SSSSSSSKPR S NKFDKVIIKS Site 602
Candida.orthopsilosis.IME2 ---IALSYYN D SPPKHVTVHS Site 595
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ------DVKS  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---TSVPENY Y VVPIGETQMV Site 601
Debaryomyces.hansenii.IME2 VKKRVVPPDI N NPPSGIPLKS Site 595
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati EGDLKSGGHV L SASAGTGASR Site 715
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ANNNVFSIGP Y RQRKDAGRVS Site 714
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ---DISPERD  
Caenorhabditis.briggsae.CDK1 ---------- - --IRKNDMNY  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO DVNAHKPDEY W DYENYVVDWG Site 601
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos GPNNGGYDDA D GAYIHVPRDH Site 714
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - -----DGTNL  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 EESLKDYRPG G YHPAFKGEPY Site 713
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - --GQRSISFN  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg SRDGSKITTV V ATPGQGTDRV Site 595
Species Residue at Site 1337
in 'msaprobs'
muscle

The residue for every species at site 1337 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - --------IR  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - ----TVVDPR  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----IPNIGN  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa TSDTSNFNDN I SYFVYGSQFT Site 605
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - -----DGLCR  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep KCVRKEGFFT V PPEHRLGRCR Site 603
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---SKRDNNF Y SVEIGDSTFT Site 601
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ----TRKRGF Y KQDINKTAWE Site 601
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---VRQLKRQ K MSQAKKFGDG Site 593
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri GVPAVPSPLP Q ALSAPQCNGD Site 716
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha MSKSKVDNQF Y SVEVGDSTFT Site 601
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 LPLKIGSPQP P QSPKNLTVHS Site 600
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ----KERPTF Y RQEVNKTIWE Site 601
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un RRAKSVEDDV E GHLIYHSGDW Site 713
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----IPNIGN  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. DEDEVITRRT V VKGHSNPRSQ Site 597
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ----YQTAHA Q ERRIQELDQT Site 595
Homo.sapiens.CLK4..Dual.specificity.protein.kinase KRSRSIEDDE E GHLICQSGDV Site 714
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U SGSNSEGDYQ L VQHEV--LCS Site 716
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen GRDSGKVTTV V ATVGQGPERS Site 595
Species Residue at Site 1337
in 'msaprobs'
muscle

The residue for every species at site 1337 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - --AHEGDSVY  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro GGTIMDPMHL Y RARRDKERRG Site 600
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ------DVRS  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ATPLQNLQVL A SSSANECISV Site 714
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen DKDGSKVTTV V ATPGQGPDRP Site 595
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -PGSNRRRPT Q GERGPGSPGE Site 600
Aspergillus.fumigatus.IME2 -----SYDYP S RVPATTSMAT Site 595
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------D F KVKLTGERER Site 595
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ----TRRRGF Y RQELNRTIWE Site 601
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S PQVAHVSSNA I LAAAQPFYQP Site 716
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma SGSNSEGDYQ L VQHEV--LCS Site 716
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina TEGVGPGVPG E VEMVKGQPFD Site 714
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - --------FG  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. KCIRKEGFFT V PPEHRLGRCR Site 603
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -----AQHQH Y TVEVGDTNFT Site 601
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. --HASSRKGF Y RIEINKMVWE Site 601
Candida.glabrata.IME2 IQELEPPPDL D SPPSTIPLKS Site 595
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 TNTVFTGKQP K YTKEVRKCIS Site 606
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -------EQP E QAPARQISFN Site 598
Species Residue at Site 1337
in 'msaprobs'
muscle

The residue for every species at site 1337 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----T--IQS  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - -SSGSKAEFI  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - --------FG  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara RRAKSVEDDD E GHLIYRVGDW Site 714
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH IPVDPFRIIK E TARDGSTGEV Site 595
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - --VGRPARED  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR KSGKQVTMVV A SVATDGVDQQ Site 594
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. RRLRGDGFFE V PAADRLGRCR Site 603
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci RSSRSVEDDK E GHLVCRIGDW Site 714
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos KVYNDGYDDD N YDYIVKNGEK Site 713
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ASVAAKNLAL L KARSFDVTFD Site 603
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -----ERPTF Y RQELNKTIWE Site 601
Lachancea.thermotolerans.SKY1 EESLRDYKPG G YHPAFRGETY Site 714
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------K F ESLMNIHGFD Site 600
Dictyostelium.discoideum.CDK1 ---------- - --------DG  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. --PPPARKGF Y RQEVTKTAWE Site 601
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U SSSNGEGDYQ L VQHEI--LCS Site 716
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. DVNTHRPREY W DYESHVVEWG Site 601
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 1337
in 'msaprobs'
muscle

The residue for every species at site 1337 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ---------A  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. DSFQEENLRQ G LPWKKSLPFG Site 713
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ----EDIDKH  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos KVYNDGYDDD N YDYIVKNGEK Site 713
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen DKDGSKVTTV V ATPGQGPDRP Site 595
Drosophila.melanogaster.GSK3H..Putative.glycogen.s SGLTNKVTTV V ATNAFGADVM Site 595
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD VDVKTLEQNE I PERLKMGRCR Site 713
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 KNKIIVPPDL D NPPFYIPLKN Site 595
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci KRSRSIEDDE E GHLICQSGDV Site 714
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ----AAAAGA G PEMVRGQVFD Site 597
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. DCFQEEDLRQ G FQWRKSLPFG Site 713
Cryptococcus.neoformans.IME2 GNRMTDPDAE N DGRVGVEDPR Site 714
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----T--IQS  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote EQEDPNDYCK G GYHLVKIGDL Site 606
Candida.lusitaniae.IME2 LHSLPIMDNQ D QGISPIQIDS Site 713
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom SSSSGEGDYQ L VQHEI--LCS Site 716
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------E F KMKTQQERAK Site 592
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 1337
in 'msaprobs'
muscle

The residue for every species at site 1337 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca DVNTQRPREY W DYESHVVDWG Site 601
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ASVVAKNLAL L KARSFDVTFD Site 603
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 SSVCKIPPDL N DPPKNIPLKS Site 595
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec KRSRSVEDDD E GHLIYHRRDM Site 713
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ------DVKS  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ----KVRRHS S PSSPTSPKFG Site 601
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly DGNPNESGHT V TTGVPSNASA Site 603
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS IDDIPPEIKE E MIQLYHDLPG Site 601
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ------DVKS  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- Q YDSVECPFCD Site 599
Homo.sapiens.HIPK2..Homeodomain.interacting.protei SGSNSEGDYQ L VQHEV--LCS Site 716
Acyrthosiphon.pisum.CDK1 ----AVKNRQ F VKEGPTKNVS Site 595
Candida.tropicalis.CDK1 -KHNSFPLDC D SPPKNLTVHS Site 595
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------D F KMKTQIERTK Site 595
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G DKDGNKVTTV L ATVGKPPDRQ Site 713
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR DVNSQRPREY W DYESYVVDWG Site 601
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - --SLSEIGFG  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 EVNVIRPKDY W DYESLIVQWG Site 601
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - --------FG  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ----ARRRGF Y RQELNRTVWE Site 601
Candida.albicans.SSN3..Serine.threonine.protein.ki ASNSILTLGP F KHRKDLTRES Site 601
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF LGRYKHVLGV G AAATVTPNSP Site 714
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA DKDSSKITSV T ATEGPPPDRT Site 595
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ------RVEF S REEINSTVWE Site 601
Species Residue at Site 1337
in 'msaprobs'
muscle

The residue for every species at site 1337 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de DEKSARRKLD V VPKLHFVGCS Site 595
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei DVNTHRPRDY W DYESHVVEWG Site 601
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U STASGDGDYQ L MLHEV--LCS Site 716
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d LSPIELKQEL P KYLPALQGCR Site 714
Candida.dubliniensis.IME2 --HQSFPLDY D SPPKHLTVHS Site 595
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---SKSDGQF Y SVQVADSTFT Site 601
Aspergillus.niger.IME2 ---CYDHHSL S RGAAPTSVAS Site 597
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ----NQSYVF Y RQELNKTLWE Site 601
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ----KVRRHS S PSSPTSPKFG Site 601
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein DVNTHRPREY W DYESHVVEWG Site 601
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty GPYNNGYDDQ N YDYILKNGEI Site 712
Schizosaccharomyces.japonicus.IME2 --FRGKFWGT S KEKSVTTCTK Site 595
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. PSSIHVPENY Y SVTIGEAQMV Site 601
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P NSLRMGEVIR E RVQDGVTGET Site 603
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE MVRLQKMMKN M NCGGPRPAAL Site 595
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. KSGKQVTMVV A SVATDGVDQQ Site 594
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. --PPPARSGF Y RQEVTKTAWE Site 601
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ACEERPQEYW D YEQGVTIDWG Site 602
Kluyveromyces.waltii.IME2 KASTNAPPDV S NPPFYIPVKP Site 595
Debaryomyces.hansenii.SKY1 EEDLKDYVPG G YHTCYIGENY Site 599
Saccharomyces.cerevisiae.IME2 GSEFSVPPDV D NPPLSIPLKT Site 606
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1337
in 'msaprobs'
muscle

The residue for every species at site 1337 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - -------DSL  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein EVNSLRSREY W DYEAHVPSWG Site 601
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------K F ESLMNIHGFD Site 600
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - -----DSLSR  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST HKRVYKHDRK T DVDRKNHGGT Site 714
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk --SPLPRKGY Y TQEVNKTVWE Site 601
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---NKREKEY Y SIDVGDSTFT Site 601
Candida.albicans.IME2 --HHSFPLDY D SPPKHLTVHS Site 595
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ---------E  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k NFKNKEKQYF S SLRSPYSACR Site 602
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -----ERPTF Y RQELNKTIWE Site 601
Kluyveromyces.lactis.IME2 TADSFIPPDV N NPPFYIPLKN Site 595
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ASVAAKNLAL L KARSFDVTFD Site 603
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. MSKSKVDNQF Y SVEVGDSTFT Site 601
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -----PRAGF Y RQELNKTVWE Site 601
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------M R ILKESRPEII Site 595
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -----PRAGF Y RQELNKTVWE Site 601
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ---------A  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME IPCDDKGIPL P NYYPGVQGCR Site 713
Neurospora.crassa.IME2 ---VHTLTPQ G SSHGIGSGQA Site 595
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th QLPNNGYDND I GEYKVVERDH Site 713
Species Residue at Site 1337
in 'msaprobs'
muscle

The residue for every species at site 1337 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ---------S  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar QRLWGEGYFE V PASERLGKCR Site 603
Ashbya.gossypii.IME2 AEAMGVPPDV N NPPFYIPLKP Site 595
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi STPLQSLQIS G SSSINECISV Site 714
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos GPNNGGYDDA D GAYIHVPRDH Site 714
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p NIVSKQVYYA H PPPTIDPNDP Site 595
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - ----TEVEEH  
Schizosaccharomyces.pombe.b.IME2 --------ES I YSVLDLTQVI Site 600
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ------AAAA G PEMVRGQVFD Site 597
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom NCTSGEGDYQ L VQHEV--LCS Site 716
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch TRALSVRDDE E GHLICRSGDV Site 713
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - --------LR  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---SKRDNNF Y SVEIGDSTFT Site 601
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 TQTHPDIQPV T EDRRSLTVKS Site 602
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ANNDVFTIGP Y RARKDRMRVS Site 714
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K --DIPAEIIQ E MDDLYDKVPQ Site 596
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly NTLRMGEVIR E KVQDGVTGET Site 595
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk IPVDPFRIIK E TARDGSTGEV Site 595
Species Residue at Site 1337
in 'msaprobs'
muscle

The residue for every species at site 1337 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro GPYNNGYDDQ N YDYILKNGEI Site 714
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo VQAAAAATVK A HHHQHSHHPQ Site 716
Scheffersomyces.stipitis.SKY1 EEDLKDYVPG G YHTCYIGENY Site 599
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 02:58, October 16th 2019
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