cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1336 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1336 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1336 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1336 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1336
in 'msaprobs'
muscle

The residue for every species at site 1336 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 WRTPSMANQN G RSLKEVIKCT Site 594
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD NEDEGTKDYK Q GGYHPVRRND Site 605
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge IPAVLSHGGR F IQYNIFGNIF Site 600
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - -------RNS  
Candida.guilliermondii.IME2 SNLHDKTPPD V NKPPPTIPLK Site 713
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ---------H  
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -----DSHLE T KVVTDGTTGE Site 592
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- M RILKESRPEI Site 594
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 NHNTGNSSAS Y SGSQSRDDST Site 712
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- D FKVKLSSERE Site 594
Schizosaccharomyces.octosporus.b.IME2 ---------E I PFSSLNLKEF Site 598
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ---SPRQVSF  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. TDVNVIRPKD Y WDYESLNVQW Site 600
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- R MGEKSSRSDR Site 712
Suberites.domuncula.JNK..Stress.activated.protein. --------SD Y YSQRVGDTVF Site 600
Homo.sapiens.CLK3..Dual.specificity.protein.kinase KRSSRSVEDD K EGHLVCRIGD Site 712
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci RKRSRSVEDD E EGHLICQSGD Site 712
Homo.sapiens.CLK2..Dual.specificity.protein.kinase SRRAKSVEDD A EGHLIYHVGD Site 713
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos EKFSKTSFDD E HGFYLKVLHD Site 712
Homo.sapiens.HIPK1..Homeodomain.interacting.protei SSSSSGEGDY Q LVQHEI--LC Site 715
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 1336
in 'msaprobs'
muscle

The residue for every species at site 1336 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ------FICI  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. AEVNSLRSRE Y WDYEAHVPSW Site 600
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM NGTGSTEVPQ S NAEVIRGQIF Site 606
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ---------R  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ---------L  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH EEEGFDAYRK G GYHAVRVGDP Site 606
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ---------F  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. HKYMNQFSPK R TSSYGGNSPF Site 712
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET NMSKSKVDNQ F YSVEVGDSTF Site 600
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U NMSKSKVDNQ F YSVEVGDSTF Site 600
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -----IRKKG F YKQDVNKTAW Site 600
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo QVQAAAAATV K AHHHQHSHHP Site 606
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 DEQEDPNDYC K GGYHLVKIGD Site 605
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ----SKRDSN F SVFEIGDSTF Site 600
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d RPKICCPRYG E RRQTESDWGK Site 713
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- N LTDAADDRSY Site 590
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- N AADAADERSR Site 594
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- M RILKESRPEI Site 594
Species Residue at Site 1336
in 'msaprobs'
muscle

The residue for every species at site 1336 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ---------P  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO SKRSSSGADG D YQLVQHEVLY Site 604
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C TEVNVIRPKD Y WDYESLIVQW Site 600
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl VAPAQVQAAA V KAHHHQHSHH Site 603
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei QNCTTGEGDY Q LVQHEV--LC Site 715
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ALLPIELKQE L PKYLPALQGC Site 713
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - -----IPDIG  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci SRRAKSVEDD A EGHLIYHVGD Site 713
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ALSPIELKQE L PKYLPALQGC Site 713
Naegleria.gruberi.LF4 HSDDEFGEQG Q HFDQAQFERM Site 713
Saccharomyces.bayanus.IME2 SGSEFSIPPD V DNPPLSIPLK Site 605
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. AEVNSLRSRE Y WDYEAHVPSW Site 600
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -----RSRPG Y FRQEINKTIW Site 600
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th QSKYNDGYDD E NADYIVRIGE Site 712
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos KKVLNHGYDD D NHDYIVRSGE Site 603
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos GGPNNGGYDD D QGSYVQVPHD Site 712
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - -----IPNIG  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - -----AEVDR  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific VSYIQPPTQT P SSAFSNESIT Site 712
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos EKFSKTSFDD E HGSYMKVLHD Site 713
Aspergillus.nidulans.IME2 ------CYEH P SRGLTPTSMA Site 596
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi EQSVKLSGIK R DIEELCEAVP Site 596
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se QPQVAHVSSN A ILAAAQPFYP Site 715
Species Residue at Site 1336
in 'msaprobs'
muscle

The residue for every species at site 1336 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. NMSKSKVDNQ F YSVEVGDSTF Site 600
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. GNGTETGHII V TTIGGRNGQP Site 712
Penicillium.marneffei.IME2 -------SHE Y SLKGTSHSAM Site 599
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -----KARPT F YRQELNKTIW Site 600
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- K GDCIASVYGY Site 598
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH FADMQDNWDD I EGYYKVVLME Site 604
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr NPNLRDNWTD A EGYYRVNIGE Site 713
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de RPKICCPRYG E RRQTESDWGK Site 713
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep GGGGGGSSTF S PIVLTSTYRL Site 601
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d LKCIRKEGFF T VPPEHRLGRC Site 602
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin NMSKSKVDNQ F YSVEVGDSTF Site 600
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ----SKCDSQ F YSVQVADSTF Site 600
Homo.sapiens.CLK1..Dual.specificity.protein.kinase RKRTRSVEDD E EGHLICQSGD Site 713
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis EQNFKLAGVK K DIEKLYEAVP Site 713
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- M RILKESRPEI Site 594
Candida.parapsilosis.IME2 ----MALSYY N DSPPKHVTVH Site 594
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen LGRDSGKVTT V VATLGQGPER Site 594
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ----SKCDSQ F YSVQVADSTF Site 600
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki TDVNTHRPRE Y WDYESHVVEW Site 600
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U RKRSRSVEDD E EGHLICESGD Site 712
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- K GDCIASVYGY Site 598
Species Residue at Site 1336
in 'msaprobs'
muscle

The residue for every species at site 1336 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ---SLSEIGF  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. TDVNTHRPRE Y WDYESHVVEW Site 600
Yarrowia.lipolytica.SSN3..Serine.threonine.protein MLGGGTNPFA A YTARKAKTKK Site 713
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -----SVKCK F RKEEVNKTLW Site 600
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos KKVLNHGYDD D NHDYIVRSGE Site 603
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE AEVNPSRPRE Y WDYEAHMIEW Site 600
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SSSSSSSSKP R SNKFDKVIIK Site 601
Candida.orthopsilosis.IME2 ----IALSYY N DSPPKHVTVH Site 594
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - -------DVK  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ----TSVPEN Y YVVPIGETQM Site 600
Debaryomyces.hansenii.IME2 VVKKRVVPPD I NNPPSGIPLK Site 594
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati IEGDLKSGGH V LSASAGTGAS Site 714
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin MANNNVFSIG P YRQRKDAGRV Site 713
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----DISPER  
Caenorhabditis.briggsae.CDK1 ---------- - ---IRKNDMN  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO TDVNAHKPDE Y WDYENYVVDW Site 600
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos GGPNNGGYDD A DGAYIHVPRD Site 713
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ------DGTN  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 NEESLKDYRP G GYHPAFKGEP Site 606
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ---GQRSISF  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg CSRDGSKITT V VATPGQGTDR Site 594
Species Residue at Site 1336
in 'msaprobs'
muscle

The residue for every species at site 1336 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ---------I  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - -----TVVDP  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - -----IPNIG  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa PTSDTSNFND N ISYFVYGSQF Site 604
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ------DGLC  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep LKCVRKEGFF T VPPEHRLGRC Site 602
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ----SKRDNN F YSVEIGDSTF Site 600
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -----TRKRG F YKQDINKTAW Site 600
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ----VRQLKR Q KMSQAKKFGD Site 592
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri GGVPAVPSPL P QALSAPQCNG Site 715
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha NMSKSKVDNQ F YSVEVGDSTF Site 600
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 PLPLKIGSPQ P PQSPKNLTVH Site 599
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -----KERPT F YRQEVNKTIW Site 600
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un SRRAKSVEDD V EGHLIYHSGD Site 712
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - -----IPNIG  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. PDEDEVITRR T VVKGHSNPRS Site 596
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -----YQTAH A QERRIQELDQ Site 594
Homo.sapiens.CLK4..Dual.specificity.protein.kinase RKRSRSIEDD E EGHLICQSGD Site 713
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U NSGSNSEGDY Q LVQHEV--LC Site 715
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen LGRDSGKVTT V VATVGQGPER Site 594
Species Residue at Site 1336
in 'msaprobs'
muscle

The residue for every species at site 1336 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ---AHEGDSV  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro GGGTIMDPMH L YRARRDKERR Site 599
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - -------DVR  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi LATPLQNLQV L ASSSANECIS Site 713
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen RDKDGSKVTT V VATPGQGPDR Site 594
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable --PGSNRRRP T QGERGPGSPG Site 599
Aspergillus.fumigatus.IME2 ------SYDY P SRVPATTSMA Site 594
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- D FKVKLTGERE Site 594
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -----TRRRG F YRQELNRTIW Site 600
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S QPQVAHVSSN A ILAAAQPFYQ Site 715
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma NSGSNSEGDY Q LVQHEV--LC Site 715
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina RTEGVGPGVP G EVEMVKGQPF Site 606
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ---------F  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. LKCIRKEGFF T VPPEHRLGRC Site 602
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ------AQHQ H YTVEVGDTNF Site 600
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---HASSRKG F YRIEINKMVW Site 600
Candida.glabrata.IME2 DIQELEPPPD L DSPPSTIPLK Site 594
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 TTNTVFTGKQ P KYTKEVRKCI Site 605
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P --------EQ P EQAPARQISF Site 597
Species Residue at Site 1336
in 'msaprobs'
muscle

The residue for every species at site 1336 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - -----T--IQ  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - --SSGSKAEF  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ---------F  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara SRRAKSVEDD D EGHLIYRVGD Site 713
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH KIPVDPFRII K ETARDGSTGE Site 594
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - ---VGRPARE  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR LKSGKQVTMV V ASVATDGVDQ Site 593
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. LRRLRGDGFF E VPAADRLGRC Site 602
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci KRSSRSVEDD K EGHLVCRIGD Site 713
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos RKVYNDGYDD D NYDYIVKNGE Site 712
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act AASVAAKNLA L LKARSFDVTF Site 602
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ------ERPT F YRQELNKTIW Site 600
Lachancea.thermotolerans.SKY1 NEESLRDYKP G GYHPAFRGET Site 606
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- K FESLMNIHGF Site 599
Dictyostelium.discoideum.CDK1 ---------- - ---------D  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---PPPARKG F YRQEVTKTAW Site 600
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U SSSSNGEGDY Q LVQHEI--LC Site 715
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. TDVNTHRPRE Y WDYESHVVEW Site 600
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 1336
in 'msaprobs'
muscle

The residue for every species at site 1336 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. SDSFQEENLR Q GLPWKKSLPF Site 712
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - -----EDIDK  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos RKVYNDGYDD D NYDYIVKNGE Site 712
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen RDKDGSKVTT V VATPGQGPDR Site 594
Drosophila.melanogaster.GSK3H..Putative.glycogen.s NSGLTNKVTT V VATNAFGADV Site 594
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD VVDVKTLEQN E IPERLKMGRC Site 712
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 EKNKIIVPPD L DNPPFYIPLK Site 594
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci RKRSRSIEDD E EGHLICQSGD Site 713
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -----AAAAG A GPEMVRGQVF Site 596
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. SDCFQEEDLR Q GFQWRKSLPF Site 712
Cryptococcus.neoformans.IME2 RGNRMTDPDA E NDGRVGVEDP Site 713
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - -----T--IQ  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote DEQEDPNDYC K GGYHLVKIGD Site 605
Candida.lusitaniae.IME2 LLHSLPIMDN Q DQGISPIQID Site 712
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom SSSSSGEGDY Q LVQHEI--LC Site 715
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- E FKMKTQQERA Site 591
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 1336
in 'msaprobs'
muscle

The residue for every species at site 1336 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca PDVNTQRPRE Y WDYESHVVDW Site 600
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a AASVVAKNLA L LKARSFDVTF Site 602
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 RSSVCKIPPD L NDPPKNIPLK Site 594
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec RKRSRSVEDD D EGHLIYHRRD Site 712
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - -------DVK  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -----KVRRH S SPSSPTSPKF Site 600
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly IDGNPNESGH T VTTGVPSNAS Site 602
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS NIDDIPPEIK E EMIQLYHDLP Site 600
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - -------DVK  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - QYDSVECPFC  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei NSGSNSEGDY Q LVQHEV--LC Site 715
Acyrthosiphon.pisum.CDK1 -----AVKNR Q FVKEGPTKNV Site 594
Candida.tropicalis.CDK1 --KHNSFPLD C DSPPKNLTVH Site 594
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- D FKMKTQIERT Site 594
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G RDKDGNKVTT V LATVGKPPDR Site 712
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ADVNSQRPRE Y WDYESYVVDW Site 600
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ---SLSEIGF  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 TEVNVIRPKD Y WDYESLIVQW Site 600
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ---------F  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -----ARRRG F YRQELNRTVW Site 600
Candida.albicans.SSN3..Serine.threonine.protein.ki MASNSILTLG P FKHRKDLTRE Site 600
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF DLGRYKHVLG V GAAATVTPNS Site 713
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA RDKDSSKITS V TATEGPPPDR Site 594
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -------RVE F SREEINSTVW Site 600
Species Residue at Site 1336
in 'msaprobs'
muscle

The residue for every species at site 1336 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de EDEKSARRKL D VVPKLHFVGC Site 594
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei TDVNTHRPRD Y WDYESHVVEW Site 600
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U QSTASGDGDY Q LMLHEV--LC Site 715
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ALSPIELKQE L PKYLPALQGC Site 713
Candida.dubliniensis.IME2 ---HQSFPLD Y DSPPKHLTVH Site 594
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ----SKSDGQ F YSVQVADSTF Site 600
Aspergillus.niger.IME2 ----CYDHHS L SRGAAPTSVA Site 596
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -----NQSYV F YRQELNKTLW Site 600
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -----KVRRH S SPSSPTSPKF Site 600
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein TDVNTHRPRE Y WDYESHVVEW Site 600
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty GGPYNNGYDD Q NYDYILKNGE Site 711
Schizosaccharomyces.japonicus.IME2 ---FRGKFWG T SKEKSVTTCT Site 594
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. EPSSIHVPEN Y YSVTIGEAQM Site 600
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P FNSLRMGEVI R ERVQDGVTGE Site 602
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE EMVRLQKMMK N MNCGGPRPAA Site 594
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. LKSGKQVTMV V ASVATDGVDQ Site 593
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---PPPARSG F YRQEVTKTAW Site 600
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ NACEERPQEY W DYEQGVTIDW Site 601
Kluyveromyces.waltii.IME2 LKASTNAPPD V SNPPFYIPVK Site 594
Debaryomyces.hansenii.SKY1 NEEDLKDYVP G GYHTCYIGEN Site 598
Saccharomyces.cerevisiae.IME2 SGSEFSVPPD V DNPPLSIPLK Site 605
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1336
in 'msaprobs'
muscle

The residue for every species at site 1336 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - --------DS  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein AEVNSLRSRE Y WDYEAHVPSW Site 600
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- K FESLMNIHGF Site 599
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ------DSLS  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST IHKRVYKHDR K TDVDRKNHGG Site 713
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---SPLPRKG Y YTQEVNKTVW Site 600
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ----NKREKE Y YSIDVGDSTF Site 600
Candida.albicans.IME2 ---HHSFPLD Y DSPPKHLTVH Site 594
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ENFKNKEKQY F SSLRSPYSAC Site 601
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ------ERPT F YRQELNKTIW Site 600
Kluyveromyces.lactis.IME2 TTADSFIPPD V NNPPFYIPLK Site 594
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina AASVAAKNLA L LKARSFDVTF Site 602
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. NMSKSKVDNQ F YSVEVGDSTF Site 600
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ------PRAG F YRQELNKTVW Site 600
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- M RILKESRPEI Site 594
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ------PRAG F YRQELNKTVW Site 600
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME QIPCDDKGIP L PNYYPGVQGC Site 712
Neurospora.crassa.IME2 ----VHTLTP Q GSSHGIGSGQ Site 594
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th SQLPNNGYDN D IGEYKVVERD Site 712
Species Residue at Site 1336
in 'msaprobs'
muscle

The residue for every species at site 1336 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar FQRLWGEGYF E VPASERLGKC Site 602
Ashbya.gossypii.IME2 QAEAMGVPPD V NNPPFYIPLK Site 594
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi LSTPLQSLQI S GSSSINECIS Site 713
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos GGPNNGGYDD A DGAYIHVPRD Site 713
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p NNIVSKQVYY A HPPPTIDPND Site 594
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - -----TEVEE  
Schizosaccharomyces.pombe.b.IME2 ---------E S IYSVLDLTQV Site 599
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -------AAA A GPEMVRGQVF Site 596
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom QNCTSGEGDY Q LVQHEV--LC Site 715
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch RTRALSVRDD E EGHLICRSGD Site 712
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ---------L  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ----SKRDNN F YSVEIGDSTF Site 600
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 KTQTHPDIQP V TEDRRSLTVK Site 601
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil MANNDVFTIG P YRARKDRMRV Site 713
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---DIPAEII Q EMDDLYDKVP Site 595
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly FNTLRMGEVI R EKVQDGVTGE Site 594
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk KIPVDPFRII K ETARDGSTGE Site 594
Species Residue at Site 1336
in 'msaprobs'
muscle

The residue for every species at site 1336 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro GGPYNNGYDD Q NYDYILKNGE Site 713
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo QVQAAAAATV K AHHHQHSHHP Site 606
Scheffersomyces.stipitis.SKY1 -EEDLKDYVP G GYHTCYIGEN Site 598
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 02:25, October 16th 2019
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