cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1332 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1332 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1332 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1332 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1332
in 'msaprobs'
muscle

The residue for every species at site 1332 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 --YLWRTPSM A NQNGRSLKEV Site 590
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD PLNNNEDEGT K DYKQGGYHPV Site 601
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge GIENIPAVLS H GGRFIQYNIF Site 596
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 LPQRSNLHDK T PPDVNKPPPT Site 605
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------D S HLETKVVTDG Site 588
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ---MRILKES  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 SSNLNHNTGN S SASYSGSQSR Site 708
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - ---DFKVKLS  
Schizosaccharomyces.octosporus.b.IME2 ---------- - --EIPFSSLN  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - -------SPR  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ARVYTDVNVI R PKDYWDYESL Site 596
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ---RMGEKSS  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - -SDYYSQRVG  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase QQSSKRSSRS V EDDKEGHLVC Site 708
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci KSHRRKRSRS V EDDEEGHLIC Site 603
Homo.sapiens.CLK2..Dual.specificity.protein.kinase SQHSSRRAKS V EDDAEGHLIY Site 604
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos DTAPEKFSKT S FDDEHGFYLK Site 708
Homo.sapiens.HIPK1..Homeodomain.interacting.protei VTTKSSSSSG E GDYQLVQHEI Site 604
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 1332
in 'msaprobs'
muscle

The residue for every species at site 1332 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ARVYAEVNSL R SREYWDYEAH Site 596
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM GSVVNGTGST E VPQSNAEVIR Site 602
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH GSEGEEEGFD A YRKGGYHAVR Site 602
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. RSEGHKYMNQ F SPKRTSSYGG Site 708
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET AKHYNMSKSK V DNQFYSVEVG Site 596
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U AKHYNMSKSK V DNQFYSVEVG Site 596
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------I R KKGFYKQDVN Site 596
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo AAPAQVQAAA A ATVKAHHHQH Site 602
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 GSDDDEQEDP N DYCKGGYHLV Site 601
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. --------SK R DSNFSVFEIG Site 596
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d PYKKRPKICC P RYGERRQTES Site 709
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ---NLTDAAD  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ---NAADAAD  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ---MRILKES  
Species Residue at Site 1332
in 'msaprobs'
muscle

The residue for every species at site 1332 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO TQPPSKRSSS G ADGDYQLVQH Site 600
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ARVYTEVNVI R PKDYWDYESL Site 596
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl PAAAVAPAQV Q AAAVKAHHHQ Site 599
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei TGSKQNCTTG E GDYQLVQHEV Site 604
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O PDSPALLPIE L KQELPKYLPA Site 709
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - ---------I  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci SSHSSRRAKS V EDDAEGHLIY Site 603
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O PDSPALSPIE L KQELPKYLPA Site 709
Naegleria.gruberi.LF4 CDEGHSDDEF G EQGQHFDQAQ Site 606
Saccharomyces.bayanus.IME2 QSSSSGSEFS I PPDVDNPPLS Site 601
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ARVYAEVNSL R SREYWDYEAH Site 596
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------R S RPGYFRQEIN Site 596
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th NNNKQSKYND G YDDENADYIV Site 708
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos TKKEKKVLNH G YDDDNHDYIV Site 599
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos QGMTGGPNNG G YDDDQGSYVQ Site 708
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ---------I  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - ---------A  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific PQSGVSYIQP P TQTPSSAFSN Site 708
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos NVVPEKFSKT S FDDEHGSYMK Site 709
Aspergillus.nidulans.IME2 ---------- C YEHPSRGLTP Site 592
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi LKKYEQSVKL S GIKRDIEELC Site 592
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se QIPTQPQVAH V SSNAILAAAQ Site 711
Species Residue at Site 1332
in 'msaprobs'
muscle

The residue for every species at site 1332 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. AKHYNMSKSK V DNQFYSVEVG Site 596
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. TVVDGNGTET G HIIVTTIGGR Site 708
Penicillium.marneffei.IME2 ---------- - SHEYSLKGTS  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------K A RPTFYRQELN Site 596
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - ---KGDCIAS  
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH LTRSFADMQD N WDDIEGYYKV Site 600
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr DFKENPNLRD N WTDAEGYYRV Site 709
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de PYKKRPKICC P RYGERRQTES Site 709
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep GSGGGGGGGG S STFSPIVLTS Site 597
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d DQIRLKCIRK E GFFTVPPEHR Site 598
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin AKHYNMSKSK V DNQFYSVEVG Site 596
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a --------SK C DSQFYSVQVA Site 596
Homo.sapiens.CLK1..Dual.specificity.protein.kinase KSHRRKRTRS V EDDEEGHLIC Site 709
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis LKKNEQNFKL A GVKKDIEKLY Site 604
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ---MRILKES  
Candida.parapsilosis.IME2 --------MA L SYYNDSPPKH Site 590
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen PGVKLGRDSG K VTTVVATLGQ Site 590
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. --------SK C DSQFYSVQVA Site 596
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ARVYTDVNTH R PREYWDYESH Site 596
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U KSHRRKRSRS V EDDEEGHLIC Site 708
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - ---KGDCIAS  
Species Residue at Site 1332
in 'msaprobs'
muscle

The residue for every species at site 1332 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - -------SLS  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ARVYTDVNTH R PREYWDYESH Site 596
Yarrowia.lipolytica.SSN3..Serine.threonine.protein SYSRMLGGGT N PFAAYTARKA Site 603
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------S V KCKFRKEEVN Site 596
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos NKKEKKVLNH G YDDDNHDYIV Site 599
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ARVYAEVNPS R PREYWDYEAH Site 596
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD TTSSSSSSSS S SKPRSNKFDK Site 597
Candida.orthopsilosis.IME2 --------IA L SYYNDSPPKH Site 590
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str --------TS V PENYYVVPIG Site 596
Debaryomyces.hansenii.IME2 ISVPVVKKRV V PPDINNPPSG Site 590
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati EGRLIEGDLK S GGHVLSASAG Site 710
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin SPMLMANNNV F SIGPYRQRKD Site 709
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - --------DI  
Caenorhabditis.briggsae.CDK1 ---------- - -------IRK  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ARVYTDVNAH K PDEYWDYENY Site 596
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos QGVIGGPNNG G YDDADGAYIH Site 709
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 CDERNEESLK D YRPGGYHPAF Site 602
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - -------GQR  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg GVKTCSRDGS K ITTVVATPGQ Site 590
Species Residue at Site 1332
in 'msaprobs'
muscle

The residue for every species at site 1332 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - ---------T  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ---------I  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa MPPPPTSDTS N FNDNISYFVY Site 600
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep EQIRLKCVRK E GFFTVPPEHR Site 598
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac --------SK R DNNFYSVEIG Site 596
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------T R KRGFYKQDIN Site 596
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO --------VR Q LKRQKMSQAK Site 588
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri GSGGGGVPAV P SPLPQALSAP Site 605
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha AKHYNMSKSK V DNQFYSVEVG Site 596
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 --YKPLPLKI G SPQPPQSPKN Site 595
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------K E RPTFYRQEVN Site 596
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un SRQSSRRAKS V EDDVEGHLIY Site 606
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ---------I  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. VKIVPDEDEV I TRRTVVKGHS Site 592
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------Y Q TAHAQERRIQ Site 590
Homo.sapiens.CLK4..Dual.specificity.protein.kinase KSHRRKRSRS I EDDEEGHLIC Site 709
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ATSKNSGSNS E GDYQLVQHEV Site 604
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen PGVKLGRDSG K VTTVVATVGQ Site 590
Species Residue at Site 1332
in 'msaprobs'
muscle

The residue for every species at site 1332 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - -------AHE  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro --IPGGGTIM D PMHLYRARRD Site 595
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi QHQILATPLQ N LQVLASSSAN Site 709
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen MKVSRDKDGS K VTTVVATPGQ Site 590
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ------PGSN R RRPTQGERGP Site 595
Aspergillus.fumigatus.IME2 ---------- S YDYPSRVPAT Site 590
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - ---DFKVKLT  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------T R RRGFYRQELN Site 596
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S QIPTQPQVAH V SSNAILAAAQ Site 711
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ATSKNSGSNS E GDYQLVQHEV Site 605
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina GEPRRTEGVG P GVPGEVEMVK Site 602
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. EQIRLKCIRK E GFFTVPPEHR Site 598
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- A QHQHYTVEVG Site 596
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -------HAS S RKGFYRIEIN Site 596
Candida.glabrata.IME2 SSIEDIQELE P PPDLDSPPST Site 590
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 WGTPTTNTVF T GKQPKYTKEV Site 601
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - -EQPEQAPAR  
Species Residue at Site 1332
in 'msaprobs'
muscle

The residue for every species at site 1332 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ---------T  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ------SSGS  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara SRQSSRRAKS V EDDDEGHLIY Site 606
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH --GTKIPVDP F RIIKETARDG Site 590
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - -------VGR  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR LSCSLKSGKQ V TMVVASVATD Site 589
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. EPLRLRRLRG D GFFEVPAADR Site 598
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci QQSSKRSSRS V EDDKEGHLVC Site 709
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos HKKERKVYND G YDDDNYDYIV Site 604
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act PAGTAASVAA K NLALLKARSF Site 598
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- E RPTFYRQELN Site 596
Lachancea.thermotolerans.SKY1 CDEKNEESLR D YKPGGYHPAF Site 602
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - ---KFESLMN  
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -------PPP A RKGFYRQEVT Site 596
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U VTTKSSSSNG E GDYQLVQHEI Site 604
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ARVYTDVNTH R PREYWDYESH Site 596
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 1332
in 'msaprobs'
muscle

The residue for every species at site 1332 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. PRSNSDSFQE E NLRQGLPWKK Site 708
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ---------E  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos HKKERKVYND G YDDDNYDYIV Site 604
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen MKVSRDKDGS K VTTVVATPGQ Site 590
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -QSKNSGLTN K VTTVVATNAF Site 590
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD KLPPVVDVKT L EQNEIPERLK Site 708
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 EMSPEKNKII V PPDLDNPPFY Site 590
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci KSHRRKRSRS I EDDEEGHLIC Site 709
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------A A AAGAGPEMVR Site 592
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. PRSNSDCFQE E DLRQGFQWRK Site 708
Cryptococcus.neoformans.IME2 ERRDRGNRMT D PDAENDGRVG Site 604
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ---------T  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote GSDDDEQEDP N DYCKGGYHLV Site 601
Candida.lusitaniae.IME2 FILFLLHSLP I MDNQDQGISP Site 708
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom VTTKSSSSSG E GDYQLVQHEI Site 604
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - ---EFKMKTQ  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 1332
in 'msaprobs'
muscle

The residue for every species at site 1332 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca SRVYPDVNTQ R PREYWDYESH Site 596
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a PVHTAASVVA K NLALLKARSF Site 598
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 ENSSRSSVCK I PPDLNDPPKN Site 590
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec HRRSRKRSRS V EDDDEGHLIY Site 708
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------K V RRHSSPSSPT Site 596
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly EAIHIDGNPN E SGHTVTTGVP Site 598
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -KTKNIDDIP P EIKEEMIQLY Site 596
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ----QYDSVE  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ATSKNSGSNS E GDYQLVQHEV Site 605
Acyrthosiphon.pisum.CDK1 ---------A V KNRQFVKEGP Site 590
Candida.tropicalis.CDK1 ------KHNS F PLDCDSPPKN Site 590
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - ---DFKMKTQ  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G PRITRDKDGN K VTTVLATVGK Site 708
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ARVYADVNSQ R PREYWDYESY Site 596
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - -------SLS  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ARVYTEVNVI R PKDYWDYESL Site 596
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------A R RRGFYRQELN Site 596
Candida.albicans.SSN3..Serine.threonine.protein.ki QPALMASNSI L TLGPFKHRKD Site 596
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF RRSGDLGRYK H VLGVGAAATV Site 603
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA LKVSRDKDSS K ITSVTATEGP Site 590
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - RVEFSREEIN  
Species Residue at Site 1332
in 'msaprobs'
muscle

The residue for every species at site 1332 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de SVSVEDEKSA R RKLDVVPKLH Site 590
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ARVYTDVNTH R PRDYWDYESH Site 596
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U GTSKQSTASG D GDYQLMLHEV Site 604
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d PDSPALSPIE L KQELPKYLPA Site 709
Candida.dubliniensis.IME2 -------HQS F PLDYDSPPKH Site 590
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a --------SK S DGQFYSVQVA Site 596
Aspergillus.niger.IME2 --------CY D HHSLSRGAAP Site 592
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------N Q SYVFYRQELN Site 596
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------K V RRHSSPSSPT Site 596
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ARVYTDVNTH R PREYWDYESH Site 596
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty KSSRGGPYNN G YDDQNYDYIL Site 707
Schizosaccharomyces.japonicus.IME2 -------FRG K FWGTSKEKSV Site 590
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. GILMEPSSIH V PENYYSVTIG Site 596
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P RPGAFNSLRM G EVIRERVQDG Site 598
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ENRGEMVRLQ K MMKNMNCGGP Site 590
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. LSCSLKSGKQ V TMVVASVATD Site 589
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -------PPP A RSGFYRQEVT Site 596
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ RVYKNACEER P QEYWDYEQGV Site 597
Kluyveromyces.waltii.IME2 RKHSLKASTN A PPDVSNPPFY Site 590
Debaryomyces.hansenii.SKY1 ----NEEDLK D YVPGGYHTCY Site 594
Saccharomyces.cerevisiae.IME2 QSSSSGSEFS V PPDVDNPPLS Site 601
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1332
in 'msaprobs'
muscle

The residue for every species at site 1332 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ARVYAEVNSL R SREYWDYEAH Site 596
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - ---KFESLMN  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST KERTIHKRVY K HDRKTDVDRK Site 709
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -------SPL P RKGYYTQEVN Site 596
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act --------NK R EKEYYSIDVG Site 596
Candida.albicans.IME2 -------HHS F PLDYDSPPKH Site 590
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k EILKENFKNK E KQYFSSLRSP Site 597
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- E RPTFYRQELN Site 596
Kluyveromyces.lactis.IME2 -LTLTTADSF I PPDVNNPPFY Site 590
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina PAHTAASVAA K NLALLKARSF Site 598
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. AKHYNMSKSK V DNQFYSVEVG Site 596
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- P RAGFYRQELN Site 596
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ---MRILKES  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- P RAGFYRQELN Site 596
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME SLEEQIPCDD K GIPLPNYYPG Site 708
Neurospora.crassa.IME2 --------VH T LTPQGSSHGI Site 590
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th TKFNSQLPNN G YDNDIGEYKV Site 708
Species Residue at Site 1332
in 'msaprobs'
muscle

The residue for every species at site 1332 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar EPLRFQRLWG E GYFEVPASER Site 598
Ashbya.gossypii.IME2 GHREQAEAMG V PPDVNNPPFY Site 590
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi QQQGLSTPLQ S LQISGSSSIN Site 709
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos HGVIGGPNNG G YDDADGAYIH Site 709
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p PNLSNNIVSK Q VYYAHPPPTI Site 590
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - ---------T  
Schizosaccharomyces.pombe.b.IME2 ---------- - --ESIYSVLD  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - AAAAGPEMVR  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom TGSKQNCTSG E GDYQLVQHEV Site 604
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch RSNSRTRALS V RDDEEGHLIC Site 708
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac --------SK R DNNFYSVEIG Site 596
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 ---TKTQTHP D IQPVTEDRRS Site 597
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil APMLMANNDV F TIGPYRARKD Site 709
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -------DIP A EIIQEMDDLY Site 591
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly RPAAFNTLRM G EVIREKVQDG Site 590
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk --GTKIPVDP F RIIKETARDG Site 590
Species Residue at Site 1332
in 'msaprobs'
muscle

The residue for every species at site 1332 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro KSSRGGPYNN G YDDQNYDYIL Site 709
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo AAPAQVQAAA A ATVKAHHHQH Site 602
Scheffersomyces.stipitis.SKY1 -----EEDLK D YVPGGYHTCY Site 594
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 15:45, October 23rd 2019
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