cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1327 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1327 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1327 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1327 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1327
in 'msaprobs'
muscle

The residue for every species at site 1327 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -------YLW R TPSMANQNGR Site 585
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD NKSFMPLNNN E DEGTKDYKQG Site 596
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge APPQMGIENI P AVLSHGGRFI Site 591
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 --SKMLPQRS N LHDKTPPDVN Site 600
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - ---DSHLETK  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - --------MR  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 PSLHVSSNLN H NTGNSSASYS Site 703
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - --------DF  
Schizosaccharomyces.octosporus.b.IME2 ---------- - -------EIP  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. TVMSKARVYT D VNVIRPKDYW Site 591
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - --------RM  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ------SDYY  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ASSRSQQSSK R SSRSVEDDKE Site 602
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci HHSHGKSHRR K RSRSVEDDEE Site 598
Homo.sapiens.CLK2..Dual.specificity.protein.kinase FSRSSSQHSS R RAKSVEDDAE Site 599
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos EAKKLDTAPE K FSKTSFDDEH Site 604
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ATTTTVTTKS S SSSGEGDYQL Site 599
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 1327
in 'msaprobs'
muscle

The residue for every species at site 1327 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. AAGSRARVYA E VNSLRSREYW Site 591
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -FNSSGSVVN G TGSTEVPQSN Site 597
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -SSSSGSEGE E EGFDAYRKGG Site 597
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. KHERPRSEGH K YMNQFSPKRT Site 703
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET DVSYIAKHYN M SKSKVDNQFY Site 591
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U DVSYIAKHYN M SKSKVDNQFY Site 591
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ---IRKKGFY  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo PGPAAAAPAQ V QAAAAATVKA Site 597
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 EEEILGSDDD E QEDPNDYCKG Site 596
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - --SKRDSNFS  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d TPPQQPYKKR P KICCPRYGER Site 704
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - --------NL  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - --------NA  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - --------MR  
Species Residue at Site 1327
in 'msaprobs'
muscle

The residue for every species at site 1327 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO GGHANTQPPS K RSSSGADGDY Site 595
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C RAMSKARVYT E VNVIRPKDYW Site 591
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl GQAPGPAAAV A PAQVQAAAVK Site 594
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei VVTATTGSKQ N CTTGEGDYQL Site 599
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O EGDYVPDSPA L LPIELKQELP Site 704
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - ----------  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci TFSRSSSHSS R RAKSVEDDAE Site 598
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O EGDYVPDSPA L SPIELKQELP Site 704
Naegleria.gruberi.LF4 PTIDMCDEGH S DDEFGEQGQH Site 601
Saccharomyces.bayanus.IME2 -KRCRQSSSS G SEFSIPPDVD Site 596
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. AAGSRARVYA E VNSLRSREYW Site 591
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ---RSRPGYF  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th SSNNNNNNKQ S KYNDGYDDEN Site 703
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos PQDSSTKKEK K VLNHGYDDDN Site 594
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos NAKKRQGMTG G PNNGGYDDDQ Site 604
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - ----------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ALPCTPQSGV S YIQPPTQTPS Site 703
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos EAKKLNVVPE K FSKTSFDDEH Site 604
Aspergillus.nidulans.IME2 ---------- - ----CYEHPS  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi PADDSLKKYE Q SVKLSGIKRD Site 587
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se QQQVQQIPTQ P QVAHVSSNAI Site 706
Species Residue at Site 1327
in 'msaprobs'
muscle

The residue for every species at site 1327 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. DVSYIAKHYN M SKSKVDNQFY Site 591
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. REMEATVVDG N GTETGHIIVT Site 703
Penicillium.marneffei.IME2 ---------- - -----SHEYS  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ---KARPTFY  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - --------KG  
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH KGISTLTRSF A DMQDNWDDIE Site 595
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr AGIGKDFKEN P NLRDNWTDAE Site 704
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de TPPQQPYKKR P KICCPRYGER Site 704
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep NQNGGGSGGG G GGGGSSTFSP Site 592
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d VDLESDQIRL K CIRKEGFFTV Site 593
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin DVSYIAKHYN M SKSKVDNQFY Site 591
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - --SKCDSQFY  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase RRSHGKSHRR K RTRSVEDDEE Site 605
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis QAEGSLKKNE Q NFKLAGVKKD Site 599
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - --------MR  
Candida.parapsilosis.IME2 ---------- - --MALSYYND  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen TSFPPPGVKL G RDSGKVTTVV Site 585
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - --SKCDSQFY  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki PVPSRARVYT D VNTHRPREYW Site 591
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U HQSHSKSHRR K RSRSVEDDEE Site 604
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - --------KG  
Species Residue at Site 1327
in 'msaprobs'
muscle

The residue for every species at site 1327 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. PVPSRARVYT D VNTHRPREYW Site 591
Yarrowia.lipolytica.SSN3..Serine.threonine.protein RRGVGSYSRM L GGGTNPFAAY Site 598
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - ---SVKCKFR  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos PQDSSNKKEK K VLNHGYDDDN Site 594
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE PIPSRARVYA E VNPSRPREYW Site 591
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD KKTTTTTSSS S SSSSSSKPRS Site 592
Candida.orthopsilosis.IME2 ---------- - --IALSYYND  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - --TSVPENYY  
Debaryomyces.hansenii.IME2 --KVTISVPV V KKRVVPPDIN Site 585
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati TAEIFEGRLI E GDLKSGGHVL Site 705
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ASTSKSPMLM A NNNVFSIGPY Site 704
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -LPSAARVYT D VNAHKPDEYW Site 591
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos NAKKRQGVIG G PNNGGYDDAD Site 604
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 SSISSCDERN E ESLKDYRPGG Site 597
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg SLVLGGVKTC S RDGSKITTVV Site 585
Species Residue at Site 1327
in 'msaprobs'
muscle

The residue for every species at site 1327 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - ----------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa QLQQLMPPPP T SDTSNFNDNI Site 595
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -EPEPEQIRL K CVRKEGFFTV Site 593
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - --SKRDNNFY  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ---TRKRGFY  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - --VRQLKRQK  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri YCPNGGSGGG G VPAVPSPLPQ Site 600
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha DVSYIAKHYN M SKSKVDNQFY Site 591
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 -------YKP L PLKIGSPQPP Site 590
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ---KERPTFY  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un QSSSRSRQSS R RAKSVEDDVE Site 601
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. SHGNDVKIVP D EDEVITRRTV Site 587
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - ---YQTAHAQ  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase HQSRSKSHRR K RSRSIEDDEE Site 602
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ATTSTATSKN S GSNSEGDYQL Site 599
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen TSFPPPGVKL G RDSGKVTTVV Site 585
Species Residue at Site 1327
in 'msaprobs'
muscle

The residue for every species at site 1327 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -------IPG G GTIMDPMHLY Site 590
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi CFQQQQHQIL A TPLQNLQVLA Site 704
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen SAFGSMKVSR D KDGSKVTTVV Site 585
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - PGSNRRRPTQ  
Aspergillus.fumigatus.IME2 ---------- - ----SYDYPS  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - --------DF  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ---TRRRGFY  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S QQQVPQIPTQ P QVAHVSSNAI Site 706
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ATTSTATSKN S GSNSEGDYQL Site 600
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina QGGGGGEPRR T EGVGPGVPGE Site 597
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. PDLECEQIRL K CIRKEGFFTV Site 593
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----AQHQHY  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - -HASSRKGFY  
Candida.glabrata.IME2 --QMESSIED I QELEPPPDLD Site 585
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---YLWGTPT T NTVFTGKQPK Site 596
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ------EQPE  
Species Residue at Site 1327
in 'msaprobs'
muscle

The residue for every species at site 1327 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara RSSSRSRQSS R RAKSVEDDDE Site 601
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -------GTK I PVDPFRIIKE Site 585
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - ----------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---QLLSCSL K SGKQVTMVVA Site 584
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. AEPELEPLRL R RLRGDGFFEV Site 593
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ASSRSQQSSK R SSRSVEDDKE Site 602
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos GDDSSHKKER K VYNDGYDDDN Site 599
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act PVKAEPAGTA A SVAAKNLALL Site 593
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ----ERPTFY  
Lachancea.thermotolerans.SKY1 SEYSSCDEKN E ESLRDYKPGG Site 597
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - --------KF  
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - -PPPARKGFY  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ATTTTVTTKS S SSNGEGDYQL Site 599
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. PVPSRARVYT D VNTHRPREYW Site 591
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 1327
in 'msaprobs'
muscle

The residue for every species at site 1327 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. LKSKRPRSNS D SFQEENLRQG Site 602
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ----------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos GDDSSHKKER K VYNDGYDDDN Site 599
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen SAFGSMKVSR D KDGSKVTTVV Site 585
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ------QSKN S GLTNKVTTVV Site 585
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD PKPAKKLPPV V DVKTLEQNEI Site 605
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 ---SNEMSPE K NKIIVPPDLD Site 585
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci HQSHSKSHRR K RSRSIEDDEE Site 602
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ---AAAAGAG  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. FKSKRPRSNS D CFQEEDLRQG Site 602
Cryptococcus.neoformans.IME2 GHGGVERRDR G NRMTDPDAEN Site 599
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote EEEILGSDDD E QEDPNDYCKG Site 596
Candida.lusitaniae.IME2 --SFFFILFL L HSLPIMDNQD Site 602
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ATTTTVTTKS S SSSGEGDYQL Site 599
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - --------EF  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 1327
in 'msaprobs'
muscle

The residue for every species at site 1327 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca PVPSRSRVYP D VNTQRPREYW Site 591
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a RVKAEPVHTA A SVVAKNLALL Site 593
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 -INERENSSR S SVCKIPPDLN Site 585
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec YSRSHHRRSR K RSRSVEDDDE Site 606
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ---KVRRHSS  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly REEVYEAIHI D GNPNESGHTV Site 593
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ------KTKN I DDIPPEIKEE Site 591
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ---------Q  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ATTSTATSKN S GSNSEGDYQL Site 600
Acyrthosiphon.pisum.CDK1 ---------- - ---AVKNRQF  
Candida.tropicalis.CDK1 ---------- - KHNSFPLDCD  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - --------DF  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G SKPTAPRITR D KDGNKVTTVL Site 602
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR AVPSRARVYA D VNSQRPREYW Site 591
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 RAMSKARVYT E VNVIRPKDYW Site 591
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ---ARRRGFY  
Candida.albicans.SSN3..Serine.threonine.protein.ki RASIPQPALM A SNSILTLGPF Site 591
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -AAMVRRSGD L GRYKHVLGVG Site 598
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA SSYGGLKVSR D KDSSKITSVT Site 585
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - -----RVEFS  
Species Residue at Site 1327
in 'msaprobs'
muscle

The residue for every species at site 1327 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---SSSVSVE D EKSARRKLDV Site 585
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei PVPSRARVYT D VNTHRPRDYW Site 591
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U VVATTGTSKQ S TASGDGDYQL Site 599
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d EGDYVPDSPA L SPIELKQELP Site 704
Candida.dubliniensis.IME2 ---------- - -HQSFPLDYD  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - --SKSDGQFY  
Aspergillus.niger.IME2 ---------- - --CYDHHSLS  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ---NQSYVFY  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ---KVRRHSS  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein PVPSRARVYT D VNTHRPREYW Site 591
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty QQMRQKSSRG G PYNNGYDDQN Site 702
Schizosaccharomyces.japonicus.IME2 ---------- - -FRGKFWGTS  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. SGTGGGILME P SSIHVPENYY Site 591
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ----QRPGAF N SLRMGEVIRE Site 593
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE NLYGEENRGE M VRLQKMMKNM Site 585
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---QLLSCSL K SGKQVTMVVA Site 584
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - -PPPARSGFY  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ VYSVARVYKN A CEERPQEYWD Site 592
Kluyveromyces.waltii.IME2 ---LGRKHSL K ASTNAPPDVS Site 585
Debaryomyces.hansenii.SKY1 ---------N E EDLKDYVPGG Site 589
Saccharomyces.cerevisiae.IME2 -KRSRQSSSS G SEFSVPPDVD Site 596
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1327
in 'msaprobs'
muscle

The residue for every species at site 1327 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein AAGSRARVYA E VNSLRSREYW Site 591
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - --------KF  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST RYIKTKERTI H KRVYKHDRKT Site 603
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - -SPLPRKGYY  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - --NKREKEYY  
Candida.albicans.IME2 ---------- - -HHSFPLDYD  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ENENKEILKE N FKNKEKQYFS Site 592
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ----ERPTFY  
Kluyveromyces.lactis.IME2 ------LTLT T ADSFIPPDVN Site 585
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina PVKAEPAHTA A SVAAKNLALL Site 593
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. DVSSIAKHYN M SKSKVDNQFY Site 591
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ----PRAGFY  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - --------MR  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ----PRAGFY  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME KEKQKSLEEQ I PCDDKGIPLP Site 703
Neurospora.crassa.IME2 ---------- - --VHTLTPQG  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th NTNKKTKFNS Q LPNNGYDNDI Site 703
Species Residue at Site 1327
in 'msaprobs'
muscle

The residue for every species at site 1327 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar AESELEPLRF Q RLWGEGYFEV Site 593
Ashbya.gossypii.IME2 -YSKKGHREQ A EAMGVPPDVN Site 585
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi RLQQQQQQGL S TPLQSLQISG Site 704
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos NAKKRHGVIG G PNNGGYDDAD Site 604
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p QSNNSPNLSN N IVSKQVYYAH Site 585
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - ----------  
Schizosaccharomyces.pombe.b.IME2 ---------- - -------ESI  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - -----AAAAG  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom VVTATTGSKQ N CTSGEGDYQL Site 599
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch SSSKQRSNSR T RALSVRDDEE Site 602
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - --SKRDNNFY  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 --------TK T QTHPDIQPVT Site 592
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil SVHGKAPMLM A NNDVFTIGPY Site 704
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - -DIPAEIIQE  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ----NRPAAF N TLRMGEVIRE Site 585
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -------GTK I PVDPFRIIKE Site 585
Species Residue at Site 1327
in 'msaprobs'
muscle

The residue for every species at site 1327 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro QQQRQKSSRG G PYNNGYDDQN Site 704
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo PGPAAAAPAQ V QAAAAATVKA Site 597
Scheffersomyces.stipitis.SKY1 ---------- E EDLKDYVPGG Site 589
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 16:25, October 23rd 2019
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