cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 1322 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1322 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1322 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1322 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1322
in 'msaprobs'
muscle

The residue for every species at site 1322 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - -YLWRTPSMA  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD DAGSSNKSFM P LNNNEDEGTK Site 591
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge --AAPAPPQM G IENIPAVLSH Site 586
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 -------SKM L PQRSNLHDKT Site 595
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - --------DS  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 NGTLPPSLHV S SNLNHNTGNS Site 602
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - ----------  
Schizosaccharomyces.octosporus.b.IME2 ---------- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -----TVMSK A RVYTDVNVIR Site 586
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase RSCSSASSRS Q QSSKRSSRSV Site 597
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci HHTSQHHSHG K SHRRKRSRSV Site 593
Homo.sapiens.CLK2..Dual.specificity.protein.kinase RRSRTFSRSS S QHSSRRAKSV Site 594
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos WFLGLEAKKL D TAPEKFSKTS Site 599
Homo.sapiens.HIPK1..Homeodomain.interacting.protei VVGAAATTTT V TTKSSSSSGE Site 594
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 1322
in 'msaprobs'
muscle

The residue for every species at site 1322 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -----AAGSR A RVYAEVNSLR Site 586
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ------FNSS G SVVNGTGSTE Site 592
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ------SSSS G SEGEEEGFDA Site 592
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. GADGHKHERP R SEGHKYMNQF Site 602
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET FGQQVDVSYI A KHYNMSKSKV Site 586
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U FGQQVDVSYI A KHYNMSKSKV Site 586
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - --------IR  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo APGQAPGPAA A APAQVQAAAA Site 592
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 DLPEQEEEIL G SDDDEQEDPN Site 591
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - -------SKR  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d EPKAITPPQQ P YKKRPKICCP Site 699
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 1322
in 'msaprobs'
muscle

The residue for every species at site 1322 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO KVATSGGHAN T QPPSKRSSSG Site 590
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -----RAMSK A RVYTEVNVIR Site 586
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl PSPAPGQAPG P AAAVAPAQVQ Site 589
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei GNPVTVVTAT T GSKQNCTTGE Site 594
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O SSALTEGDYV P DSPALLPIEL Site 602
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - ----------  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci RRRSRTFSRS S SHSSRRAKSV Site 593
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O SSALTEGDYV P DSPALSPIEL Site 602
Naegleria.gruberi.LF4 NATGDPTIDM C DEGHSDDEFG Site 596
Saccharomyces.bayanus.IME2 ------KRCR Q SSSSGSEFSI Site 591
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -----AAGSR A RVYAEVNSLR Site 586
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - --------RS  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th TTTTSSSNNN N NNKQSKYNDG Site 698
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos AQQAPPQDSS T KKEKKVLNHG Site 589
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos YFLGLNAKKR Q GMTGGPNNGG Site 599
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - ----------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific KMCPTALPCT P QSGVSYIQPP Site 698
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos WFLGLEAKKL N VVPEKFSKTS Site 599
Aspergillus.nidulans.IME2 ---------- - ---------C  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi GSDRCPADDS L KKYEQSVKLS Site 569
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se KNQQKQQQVQ Q IPTQPQVAHV Site 603
Species Residue at Site 1322
in 'msaprobs'
muscle

The residue for every species at site 1322 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. FGNQVDVSYI A KHYNMSKSKV Site 586
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. KIRDDREMEA T VVDGNGTETG Site 603
Penicillium.marneffei.IME2 ---------- - ----------  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - --------KA  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - ----------  
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH RQNTGKGIST L TRSFADMQDN Site 590
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ARLRAAGIGK D FKENPNLRDN Site 699
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de EPKAITPPQQ P YKKRPKICCP Site 699
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep HNQSSNQNGG G SGGGGGGGGS Site 587
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -----VDLES D QIRLKCIRKE Site 588
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin FDKQVDVSYI A KHYNMSKSKV Site 586
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - -------SKC  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase HSTSHRRSHG K SHRRKRTRSV Site 600
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis QRDRFQAEGS L KKNEQNFKLA Site 594
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - -------MAL  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen GPGAGTSFPP P GVKLGRDSGK Site 567
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - -------SKC  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -----PVPSR A RVYTDVNTHR Site 586
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U HHCSSHQSHS K SHRRKRSRSV Site 599
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - ----------  
Species Residue at Site 1322
in 'msaprobs'
muscle

The residue for every species at site 1322 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -----PVPSR A RVYTDVNTHR Site 586
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ----YRRGVG S YSRMLGGGTN Site 593
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - --------SV  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos AQQAPPQDSS N KKEKKVLNHG Site 589
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -----PIPSR A RVYAEVNPSR Site 586
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD DDNGNKKTTT T TSSSSSSSSS Site 587
Candida.orthopsilosis.IME2 ---------- - -------IAL  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - -------TSV  
Debaryomyces.hansenii.IME2 -------KVT I SVPVVKKRVV Site 567
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati LQNPATAEIF E GRLIEGDLKS Site 700
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ----SASTSK S PMLMANNNVF Site 699
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ------LPSA A RVYTDVNAHK Site 586
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos YFVGPNAKKR Q GVIGGPNNGG Site 599
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 DLDSDSSISS C DERNEESLKD Site 592
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg NKQSPSLVLG G VKTCSRDGSK Site 567
Species Residue at Site 1322
in 'msaprobs'
muscle

The residue for every species at site 1322 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - ----------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa --TQQQLQQL M PPPPTSDTSN Site 590
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ------EPEP E QIRLKCVRKE Site 588
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - -------SKR  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - --------TR  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - -------VRQ  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri LGQKFYCPNG G SGGGGVPAVP Site 595
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha FGKQVDVSYI A KHYNMSKSKV Site 586
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 ---------- - -YKPLPLKIG  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - --------KE  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un TRSYSQSSSR S RQSSRRAKSV Site 596
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -----SHGND V KIVPDEDEVI Site 569
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - --------YQ  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase RHCSSHQSRS K SHRRKRSRSI Site 597
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U SGATAATTST A TSKNSGSNSE Site 594
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen GPGAGTSFPP P GVKLGRDSGK Site 567
Species Residue at Site 1322
in 'msaprobs'
muscle

The residue for every species at site 1322 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - -IPGGGTIMD  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi YGQPACFQQQ Q HQILATPLQN Site 605
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen PVQQPSAFGS M KVSRDKDGSK Site 567
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - -----PGSNR  
Aspergillus.fumigatus.IME2 ---------- - ---------S  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - ----------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - --------TR  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S KNPQKQQQVP Q IPTQPQVAHV Site 603
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ATVATATTST A TSKNSGSNSE Site 595
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina --AAAQGGGG G EPRRTEGVGP Site 592
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -----PDLEC E QIRLKCIRKE Site 588
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ---------A  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ------HASS  
Candida.glabrata.IME2 -------QME S SIEDIQELEP Site 567
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 --------YL W GTPTTNTVFT Site 591
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 1322
in 'msaprobs'
muscle

The residue for every species at site 1322 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara SRSFSRSSSR S RQSSRRAKSV Site 596
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - -GTKIPVDPF  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - ----------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR --------QL L SCSLKSGKQV Site 566
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ----PAEPEL E PLRLRRLRGD Site 588
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci RSCSSASSRS Q QSSKRSSRSV Site 597
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos HQQGQGDDSS H KKERKVYNDG Site 594
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act GEPPGPVKAE P AGTAASVAAK Site 588
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ---------E  
Lachancea.thermotolerans.SKY1 EQESDSEYSS C DEKNEESLRD Site 592
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ------PPPA  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U VVGAAATTTT V TTKSSSSNGE Site 594
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -----PVPSR A RVYTDVNTHR Site 586
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 1322
in 'msaprobs'
muscle

The residue for every species at site 1322 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ASAQKLKSKR P RSNSDSFQEE Site 597
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ----------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos HQQGQGDDSS H KKERKVYNDG Site 594
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen PVQQPSAFGS M KVSRDKDGSK Site 567
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - QSKNSGLTNK  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD EGTRYPKPAK K LPPVVDVKTL Site 600
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 --------SN E MSPEKNKIIV Site 567
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci RPCASHQSHS K SHRRKRSRSI Site 597
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - --------AA  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ARAQKFKSKR P RSNSDCFQEE Site 597
Cryptococcus.neoformans.IME2 IQGVNGHGGV E RRDRGNRMTD Site 594
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote DIPEQEEEIL G SDDDEQEDPN Site 591
Candida.lusitaniae.IME2 -------SFF F ILFLLHSLPI Site 597
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom VVGAAATTTT V TTKSSSSSGE Site 594
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - ----------  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 1322
in 'msaprobs'
muscle

The residue for every species at site 1322 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -----PVPSR S RVYPDVNTQR Site 586
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a GEPPGRVKAE P VHTAASVVAK Site 588
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 ------INER E NSSRSSVCKI Site 567
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec HQRSSYSRSH H RRSRKRSRSV Site 601
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - --------KV  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly SEESAREEVY E AIHIDGNPNE Site 588
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - KTKNIDDIPP  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ATVATATTST A TSKNSGSNSE Site 595
Acyrthosiphon.pisum.CDK1 ---------- - --------AV  
Candida.tropicalis.CDK1 ---------- - -----KHNSF  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - ----------  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G HVSRDSKPTA P RITRDKDGNK Site 597
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -----AVPSR A RVYADVNSQR Site 586
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -----RAMSK A RVYTEVNVIR Site 586
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - --------AR  
Candida.albicans.SSN3..Serine.threonine.protein.ki GTVGTRASIP Q PALMASNSIL Site 586
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ------AAMV R RSGDLGRYKH Site 593
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA NRGSTSSYGG L KVSRDKDSSK Site 567
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ----------  
Species Residue at Site 1322
in 'msaprobs'
muscle

The residue for every species at site 1322 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de --------SS S VSVEDEKSAR Site 567
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -----PVPSR A RVYTDVNTHR Site 586
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ANQVTVVATT G TSKQSTASGD Site 594
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d SSAPTEGDYV P DSPALSPIEL Site 602
Candida.dubliniensis.IME2 ---------- - ------HQSF  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - -------SKS  
Aspergillus.niger.IME2 ---------- - -------CYD  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - --------NQ  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - --------KV  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -----PVPSR A RVYTDVNTHR Site 586
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ETESQQQMRQ K SSRGGPYNNG Site 697
Schizosaccharomyces.japonicus.IME2 ---------- - ------FRGK  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. RHHINSGTGG G ILMEPSSIHV Site 586
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------Q R PGAFNSLRMG Site 588
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -----NLYGE E NRGEMVRLQK Site 567
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. --------QL L SCSLKSGKQV Site 566
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ------PPPA  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -----VYSVA R VYKNACEERP Site 587
Kluyveromyces.waltii.IME2 --------LG R KHSLKASTNA Site 567
Debaryomyces.hansenii.SKY1 ---------- - ---NEEDLKD  
Saccharomyces.cerevisiae.IME2 ------KRSR Q SSSSGSEFSV Site 591
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1322
in 'msaprobs'
muscle

The residue for every species at site 1322 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -----AAGSR A RVYAEVNSLR Site 586
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - ----------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -----RYIKT K ERTIHKRVYK Site 598
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ------SPLP  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - -------NKR  
Candida.albicans.IME2 ---------- - ------HHSF  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k TCNIKENENK E ILKENFKNKE Site 587
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ---------E  
Kluyveromyces.lactis.IME2 ---------- - LTLTTADSFI  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina AEPPGPVKAE P AHTAASVAAK Site 588
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. FDKHVDVSSI A KHYNMSKSKV Site 586
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ---------P  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ---------P  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME PEEKLKEKQK S LEEQIPCDDK Site 698
Neurospora.crassa.IME2 ---------- - -------VHT  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th IYFTGNTNKK T KFNSQLPNNG Site 698
Species Residue at Site 1322
in 'msaprobs'
muscle

The residue for every species at site 1322 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar AEAASAESEL E PLRFQRLWGE Site 588
Ashbya.gossypii.IME2 ------YSKK G HREQAEAMGV Site 567
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi YSQLARLQQQ Q QQGLSTPLQS Site 699
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos YFVGPNAKKR H GVIGGPNNGG Site 599
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -----QSNNS P NLSNNIVSKQ Site 567
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - ----------  
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom GNPVTVVTAT T GSKQNCTSGE Site 594
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch RSYSQSSSKQ R SNSRTRALSV Site 597
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - -------SKR  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 ---------- - --TKTQTHPD  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ----GSVHGK A PMLMANNDVF Site 605
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ------DIPA  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------N R PAAFNTLRMG Site 567
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - -GTKIPVDPF  
Species Residue at Site 1322
in 'msaprobs'
muscle

The residue for every species at site 1322 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ETDLQQQQRQ K SSRGGPYNNG Site 699
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo APGQAPGPAA A APAQVQAAAA Site 592
Scheffersomyces.stipitis.SKY1 ---------- - ----EEDLKD  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 15:46, October 23rd 2019
Questions/Comments? help@phylobot.com