cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 1313 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1313 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1313 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1313 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1313
in 'msaprobs'
muscle

The residue for every species at site 1313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - ----------  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD NNNENNRDND A GSSNKSFMPL Site 569
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - AAPAPPQMGI  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 ---------- - -----SKMLP  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 PNRSNVRLVN G TLPPSLHVSS Site 593
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - ----------  
Schizosaccharomyces.octosporus.b.IME2 ---------- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ---TVMSKAR  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase AHHCHKRRTR S CSSASSRSQQ Site 588
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci SYKSKHRSRH H TSQHHSHGKS Site 584
Homo.sapiens.CLK2..Dual.specificity.protein.kinase SRRKHRRRRR R SRTFSRSSSQ Site 585
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos SEILGYAELW F LGLEAKKLDT Site 590
Homo.sapiens.HIPK1..Homeodomain.interacting.protei PPLMLQNRTV V GAAATTTTVT Site 585
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 1313
in 'msaprobs'
muscle

The residue for every species at site 1313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ---AAGSRAR  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - ----FNSSGS  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----SSSSGS  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -LDGLEIEAG A DGHKHERPRS Site 593
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET DVKIAFCQGF G QQVDVSYIAK Site 564
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U DVKIAFCQGF G QQVDVSYIAK Site 564
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo QQQPYFPSPA P GQAPGPAAAA Site 570
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 RGSAPHSESD L PEQEEEILGS Site 569
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - ----------  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -DLSPPDSPE P KAITPPQQPY Site 690
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 1313
in 'msaprobs'
muscle

The residue for every species at site 1313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ISSLKTAHTK V ATSGGHANTQ Site 568
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ---RAMSKAR  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl NPGQAQSYFP S PAPGQAPGPA Site 567
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei LPAMLQTNMG N PVTVVTATTG Site 585
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -EVGEGTPQS S ALTEGDYVPD Site 593
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - ----------  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci SSRRKHRRRR R RSRTFSRSSS Site 584
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -EVGEGTPQS S ALTEGDYVPD Site 593
Naegleria.gruberi.LF4 NESVDMIMNN A TGDPTIDMCD Site 587
Saccharomyces.bayanus.IME2 ---------- - ----KRCRQS  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ---AAGSRAR  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th NSNNNYNNNT T TTSSSNNNNN Site 605
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos VYYAKKKRRA Q QAPPQDSSTK Site 567
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos HEIFSYPEIY F LGLNAKKRQG Site 590
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - ----------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific IVSVPATAQK M CPTALPCTPQ Site 689
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos SEILGYSELW F LGLEAKKLNV Site 590
Aspergillus.nidulans.IME2 ---------- - ----------  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -PMAFSSLRG S DRCPADDSLK Site 560
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se AVGSTTCYEK N QQKQQQVQQI Site 594
Species Residue at Site 1313
in 'msaprobs'
muscle

The residue for every species at site 1313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. DVKIAFCQGF G NQVDVSYIAK Site 564
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. RLPEEMNDMK I RDDREMEATV Site 594
Penicillium.marneffei.IME2 ---------- - ----------  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - ----------  
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ADSPSPSVKR Q NTGKGISTLT Site 568
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr DMFAAYFDSA R LRAAGIGKDF Site 690
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -DPSPPDSPE P KAITPPQQPY Site 690
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------H N QSSNQNGGGS Site 565
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ---VDLESDQ  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin DVKIAFCQGF D KQVDVSYIAK Site 564
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase SYKSKHRIHH S TSHRRSHGKS Site 591
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis MDEPMAFSPQ R DRFQAEGSLK Site 585
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen GGSGGGGSGG P GAGTSFPPPG Site 558
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ---PVPSRAR  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U SSHKRKHKRH H CSSHQSHSKS Site 590
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - ----------  
Species Residue at Site 1313
in 'msaprobs'
muscle

The residue for every species at site 1313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ---PVPSRAR  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - --YRRGVGSY  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos VYYAKKKRRA Q QAPPQDSSNK Site 567
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ---PIPSRAR  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ILEKDKKETD D NGNKKTTTTT Site 565
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ----------  
Debaryomyces.hansenii.IME2 ---------- - -----KVTIS  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati EEAGSSNKPL Q NPATAEIFEG Site 598
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - --SASTSKSP  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----LPSAAR  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos LEIVSYPEIY F VGPNAKKRQG Site 590
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 SDSGPQSDSD L DSDSSISSCD Site 570
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg PRTSSFAEGN K QSPSLVLGGV Site 558
Species Residue at Site 1313
in 'msaprobs'
muscle

The residue for every species at site 1313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - ----------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- - TQQQLQQLMP  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----EPEPEQ  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - ----------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri VFGGLIQPPL G QKFYCPNGGS Site 586
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha DVKIAFCQGF G KQVDVSYIAK Site 564
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 ---------- - ----------  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un RKQKRRKRRT R SYSQSSSRSR Site 587
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ---SHGNDVK  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - ----------  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase RSSPKRKRNR H CSSHQSRSKS Site 588
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U HPPVTQNNAS G ATAATTSTAT Site 585
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen SGSGGGGSGG P GAGTSFPPPG Site 558
Species Residue at Site 1313
in 'msaprobs'
muscle

The residue for every species at site 1313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ----------  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi PPACQLSTPY G QPACFQQQQH Site 596
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen TTSFAESCKP V QQPSAFGSMK Site 558
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---------- - ----------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - ----------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S AVGSTTCYEK N PQKQQQVPQI Site 594
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma PMIQNNASGA T VATATTSTAT Site 586
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - AAAQGGGGGE  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ---PDLECEQ  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----------  
Candida.glabrata.IME2 ---------- - -----QMESS  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- - ------YLWG  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 1313
in 'msaprobs'
muscle

The residue for every species at site 1313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara RKHRRRRRRS R SFSRSSSRSR Site 587
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - ----------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ------QLLS  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - --PAEPELEP  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci AHHCHKRRTR S CSSASSRSQQ Site 588
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos VYYAKKKRRH Q QGQGDDSSHK Site 585
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act KEDDGEDGSG E PPGPVKAEPA Site 566
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ----------  
Lachancea.thermotolerans.SKY1 DGKDKSDPEE Q ESDSEYSSCD Site 368
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ----------  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U PPLMLQNRTV V GAAATTTTVT Site 585
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ---PVPSRAR  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 1313
in 'msaprobs'
muscle

The residue for every species at site 1313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -FHPRGLEAA S AQKLKSKRPR Site 588
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ----------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos VYYAKKKRRH Q QGQGDDSSHK Site 585
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen TTSFAESCKP V QQPSAFGSMK Site 558
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - ---------Q  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ------SEEE G TRYPKPAKKL Site 591
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 ---------- - ------SNEM  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci RSSPKRKRNR P CASHQSHSKS Site 588
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -FHPRGLQAA R AQKFKSKRPR Site 588
Cryptococcus.neoformans.IME2 GQASGNMSII Q GVNGHGGVER Site 585
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote RGSAPHSESD I PEQEEEILGS Site 569
Candida.lusitaniae.IME2 ---------- - -----SFFFI  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom PPLMLQNRTV V GAAATTTTVT Site 585
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - ----------  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 1313
in 'msaprobs'
muscle

The residue for every species at site 1313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ---PVPSRSR  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a KEEDGEDGSG E PPGRVKAEPV Site 566
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 ---------- - ----INEREN  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec RRGRRRSPSH Q RSSYSRSHHR Site 592
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly MQAMKLRDRS E ESAREEVYEA Site 566
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ---------K  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei PMIQNNASGA T VATATTSTAT Site 586
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 ---------- - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - ----------  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G GRATSFADPH V SRDSKPTAPR Site 588
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ---AVPSRAR  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ---RAMSKAR  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki PHIPHHQLPG T VGTRASIPQP Site 564
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - ----AAMVRR  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA PRTTSFADAN R GSTSSYGGLK Site 558
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ----------  
Species Residue at Site 1313
in 'msaprobs'
muscle

The residue for every species at site 1313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - ------SSSV  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ---PVPSRAR  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U LPAMLPNNAA N QVTVVATTGT Site 585
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -EVGEGTPQS S APTEGDYVPD Site 593
Candida.dubliniensis.IME2 ---------- - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - ----------  
Aspergillus.niger.IME2 ---------- - ----------  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ---PVPSRAR  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty STMVVPMRTE T ESQQQMRQKS Site 688
Schizosaccharomyces.japonicus.IME2 ---------- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. SCQSVYSPVR H HINSGTGGGI Site 564
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - -------QRP  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ---NLYGEEN  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ------QLLS  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ---VYSVARV  
Kluyveromyces.waltii.IME2 ---------- - ------LGRK  
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 ---------- - ----KRSRQS  
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1313
in 'msaprobs'
muscle

The residue for every species at site 1313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ---AAGSRAR  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - ----------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - ---RYIKTKE  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - ----------  
Candida.albicans.IME2 ---------- - ----------  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -IQENENKET C NIKENENKEI Site 565
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ----------  
Kluyveromyces.lactis.IME2 ---------- - ---------L  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina KEEDGEDGSA E PPGPVKAEPA Site 566
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. DVKIAFCQGF D KHVDVSSIAK Site 564
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ----------  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -TQEQPEEKP E EKLKEKQKSL Site 689
Neurospora.crassa.IME2 ---------- - ----------  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th QSEILDYPQI Y FTGNTNKKTK Site 689
Species Residue at Site 1313
in 'msaprobs'
muscle

The residue for every species at site 1313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ------GDRA E AASAESELEP Site 566
Ashbya.gossypii.IME2 ---------- - ----YSKKGH  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi PPACPSSTPY S QLARLQQQQQ Site 599
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos LEIINYPEIY F VGPNAKKRHG Site 590
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ---QSNNSPN  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - ----------  
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom LPAMLQTNMG N PVTVVTATTG Site 585
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch KHKRRRRKTR S YSQSSSKQRS Site 588
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 ---------- - ----------  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - --GSVHGKAP  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - -------NRP  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - ----------  
Species Residue at Site 1313
in 'msaprobs'
muscle

The residue for every species at site 1313 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro STMVVPMRTE T DLQQQQRQKS Site 601
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo QQQPYFPSPA P GQAPGPAAAA Site 570
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 16:25, October 23rd 2019
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