cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 1310 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1310 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1310 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 1310 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 1310
in 'msaprobs'
muscle

The residue for every species at site 1310 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - ----------  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD NNNNNNENNR D NDAGSSNKSF Site 566
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ---AAPAPPQ  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 ---------- - --------SK  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 SQMPNRSNVR L VNGTLPPSLH Site 590
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - ----------  
Schizosaccharomyces.octosporus.b.IME2 ---------- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ------TVMS  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase RKHAHHCHKR R TRSCSSASSR Site 585
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci GRSSYKSKHR S RHHTSQHHSH Site 568
Homo.sapiens.CLK2..Dual.specificity.protein.kinase QRSSRRKHRR R RRRSRTFSRS Site 582
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos YEQSEILGYA E LWFLGLEAKK Site 587
Homo.sapiens.HIPK1..Homeodomain.interacting.protei EEHPPLMLQN R TVVGAAATTT Site 569
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 1310
in 'msaprobs'
muscle

The residue for every species at site 1310 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ------AAGS  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - -------FNS  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - -------SSS  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ----LDGLEI E AGADGHKHER Site 590
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET PILDVKIAFC Q GFGQQVDVSY Site 561
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U PILDVKIAFC Q GFGQQVDVSY Site 561
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo NPGQQQPYFP S PAPGQAPGPA Site 567
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 TQHRGSAPHS E SDLPEQEEEI Site 566
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - ----------  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ----DLSPPD S PEPKAITPPQ Site 687
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 1310
in 'msaprobs'
muscle

The residue for every species at site 1310 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO IGPISSLKTA H TKVATSGGHA Site 565
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ------RAMS  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl AMLNPGQAQS Y FPSPAPGQAP Site 564
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei LSILPAMLQT N MGNPVTVVTA Site 569
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ----EVGEGT P QSSALTEGDY Site 590
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - ----------  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci SQRSSRRKHR R RRRRSRTFSR Site 581
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ----EVGEGT P QSSALTEGDY Site 590
Naegleria.gruberi.LF4 ELSNESVDMI M NNATGDPTID Site 584
Saccharomyces.bayanus.IME2 ---------- - -------KRC  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ------AAGS  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th NNNNSNNNYN N NTTTTSSSNN Site 602
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos INEVYYAKKK R RAQQAPPQDS Site 564
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos FEHHEIFSYP E IYFLGLNAKK Site 587
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - ----------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific RPVIVSVPAT A QKMCPTALPC Site 686
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos YEQSEILGYS E LWFLGLEAKK Site 587
Aspergillus.nidulans.IME2 ---------- - ----------  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ----PMAFSS L RGSDRCPADD Site 557
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se HPAAVGSTTC Y EKNQQKQQQV Site 591
Species Residue at Site 1310
in 'msaprobs'
muscle

The residue for every species at site 1310 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. PTLDVKIAFC Q GFGNQVDVSY Site 561
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. GVDRLPEEMN D MKIRDDREME Site 591
Penicillium.marneffei.IME2 ---------- - ----------  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - ----------  
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH DMFADSPSPS V KRQNTGKGIS Site 565
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ESDDMFAAYF D SARLRAAGIG Site 687
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ----DPSPPD S PEPKAITPPQ Site 687
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - -HNQSSNQNG  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ------VDLE  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin PTLDVKIAFC Q GFDKQVDVSY Site 561
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase GRSSYKSKHR I HHSTSHRRSH Site 588
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis GIQMDEPMAF S PQRDRFQAEG Site 567
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen GGPGGSGGGG S GGPGAGTSFP Site 555
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ------PVPS  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U SRKSSHKRKH K RHHCSSHQSH Site 587
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - ----------  
Species Residue at Site 1310
in 'msaprobs'
muscle

The residue for every species at site 1310 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ------PVPS  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - -----YRRGV  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos INEVYYAKKK R RAQQAPPQDS Site 564
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ------PIPS  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD KDQILEKDKK E TDDNGNKKTT Site 562
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ----------  
Debaryomyces.hansenii.IME2 ---------- - --------KV  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati IKDEEAGSSN K PLQNPATAEI Site 595
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - -----SASTS  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - -------LPS  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos YEKLEIVSYP E IYFVGPNAKK Site 587
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 SIQSDSGPQS D SDLDSDSSIS Site 567
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg --RPRTSSFA E GNKQSPSLVL Site 555
Species Residue at Site 1310
in 'msaprobs'
muscle

The residue for every species at site 1310 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - ----------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- - ---TQQQLQQ  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - -------EPE  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - ----------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri CAGVFGGLIQ P PLGQKFYCPN Site 570
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha PTLDVKIAFC Q GFGKQVDVSY Site 561
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 ---------- - ----------  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un SARRKQKRRK R RTRSYSQSSS Site 584
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ------SHGN  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - ----------  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase RSRRSSPKRK R NRHCSSHQSR Site 585
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U VDEHPPVTQN N ASGATAATTS Site 569
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen GGPSGSGGGG S GGPGAGTSFP Site 555
Species Residue at Site 1310
in 'msaprobs'
muscle

The residue for every species at site 1310 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ----------  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi NDFPPACQLS T PYGQPACFQQ Site 593
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen RPRTTSFAES C KPVQQPSAFG Site 555
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---------- - ----------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - ----------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S HPAAVGSTTC Y EKNPQKQQQV Site 591
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma EHPPMIQNNA S GATVATATTS Site 570
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ---AAAQGGG  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ------PDLE  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----------  
Candida.glabrata.IME2 ---------- - --------QM  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- - ---------Y  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 1310
in 'msaprobs'
muscle

The residue for every species at site 1310 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara SSRRKHRRRR R RSRSFSRSSS Site 584
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - ----------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ---------Q  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - -----PAEPE  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci RKHAHHCHKR R TRSCSSASSR Site 585
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos INEVYYAKKK R RHQQGQGDDS Site 569
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -PLKEDDGED G SGEPPGPVKA Site 563
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ----------  
Lachancea.thermotolerans.SKY1 DCGDGKDKSD P EEQESDSEYS Site 365
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ----------  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U DERPPLMLQN R TVVGAAATTT Site 569
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ------PVPS  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 1310
in 'msaprobs'
muscle

The residue for every species at site 1310 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ----FHPRGL E AASAQKLKSK Site 585
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ----------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos INEVYYAKKK R RHQQGQGDDS Site 569
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen RPRTTSFAES C KPVQQPSAFG Site 555
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - ----------  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------S E EEGTRYPKPA Site 588
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 ---------- - ---------S  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci RSRRSSPKRK R NRPCASHQSH Site 585
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ----FHPRGL Q AARAQKFKSK Site 585
Cryptococcus.neoformans.IME2 YRDGQASGNM S IIQGVNGHGG Site 569
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote TQHRGSAPHS E SDIPEQEEEI Site 566
Candida.lusitaniae.IME2 ---------- - --------SF  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom EEHPPLMLQN R TVVGAAATTT Site 569
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - ----------  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 1310
in 'msaprobs'
muscle

The residue for every species at site 1310 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ------PVPS  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -PLKEEDGED G SGEPPGRVKA Site 563
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 ---------- - -------INE  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec RSSRRGRRRS P SHQRSSYSRS Site 589
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly AQDMQAMKLR D RSEESAREEV Site 563
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei EHPPMIQNNA S GATVATATTS Site 570
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 ---------- - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - ----------  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G GTRGRATSFA D PHVSRDSKPT Site 585
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ------AVPS  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ------RAMS  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki KPNPHIPHHQ L PGTVGTRASI Site 561
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - -------AAM  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA SGRPRTTSFA D ANRGSTSSYG Site 555
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ----------  
Species Residue at Site 1310
in 'msaprobs'
muscle

The residue for every species at site 1310 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - ---------S  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ------PVPS  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U LSILPAMLPN N AANQVTVVAT Site 569
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ----EVGEGT P QSSAPTEGDY Site 590
Candida.dubliniensis.IME2 ---------- - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - ----------  
Aspergillus.niger.IME2 ---------- - ----------  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ------PVPS  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty PPTSTMVVPM R TETESQQQMR Site 685
Schizosaccharomyces.japonicus.IME2 ---------- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. SLDSCQSVYS P VRHHINSGTG Site 561
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - ----------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ------NLYG  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ---------Q  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ------VYSV  
Kluyveromyces.waltii.IME2 ---------- - ---------L  
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 ---------- - -------KRS  
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 1310
in 'msaprobs'
muscle

The residue for every species at site 1310 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ------AAGS  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - ----------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - ------RYIK  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - ----------  
Candida.albicans.IME2 ---------- - ----------  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ----IQENEN K ETCNIKENEN Site 562
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ----------  
Kluyveromyces.lactis.IME2 ---------- - ----------  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -PLKEEDGED G SAEPPGPVKA Site 563
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. PTLDVKIAFC Q GFDKHVDVSS Site 561
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ----------  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ----TQEQPE E KPEEKLKEKQ Site 686
Neurospora.crassa.IME2 ---------- - ----------  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th SAEQSEILDY P QIYFTGNTNK Site 686
Species Residue at Site 1310
in 'msaprobs'
muscle

The residue for every species at site 1310 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------G D RAEAASAESE Site 563
Ashbya.gossypii.IME2 ---------- - -------YSK  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi NDFPPACPSS T PYSQLARLQQ Site 596
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos YEKLEIINYP E IYFVGPNAKK Site 587
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ------QSNN  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - ----------  
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom LSILPAMLQT N MGNPVTVVTA Site 569
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch SRRKHKRRRR K TRSYSQSSSK Site 585
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 ---------- - ----------  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - -----GSVHG  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - ----------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - ----------  
Species Residue at Site 1310
in 'msaprobs'
muscle

The residue for every species at site 1310 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro PPTSTMVVPM R TETDLQQQQR Site 598
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo NPGQQQPYFP S PAPGQAPGPA Site 567
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 02:16, October 16th 2019
Questions/Comments? help@phylobot.com